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FFCP PHASE1:Mm9::chr15:98784028..98784038,-: Difference between revisions

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{{FFCP|EntrezGene=22142|HGNC=|UniProt=P68369|association_with_transcript=-46bp_to_ENSMUST00000097014,ENSMUST00000136329_5end|description=CAGE_peak_7_at_Tuba1a_5end|id=chr15:98784028..98784038,-|ontology_enrichment_celltype=CL:0000117!3.94e-08!23;CL:0000337!3.94e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-08,23;CL:0000337,1.96e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.56e-13!63;UBERON:0001017!6.39e-13!73;UBERON:0005743!6.39e-13!73;UBERON:0004121!1.10e-12!102;UBERON:0000924!1.10e-12!102;UBERON:0006601!1.10e-12!102;UBERON:0004111!3.26e-12!122;UBERON:0000073!3.53e-12!75;UBERON:0001016!3.53e-12!75;UBERON:0001049!9.96e-12!52;UBERON:0005068!9.96e-12!52;UBERON:0006241!9.96e-12!52;UBERON:0007135!9.96e-12!52;UBERON:0000955!1.33e-11!50;UBERON:0006238!1.33e-11!50;UBERON:0000025!3.72e-11!114;UBERON:0002616!4.25e-11!49;UBERON:0002346!4.65e-11!71;UBERON:0003075!4.65e-11!71;UBERON:0007284!4.65e-11!71;UBERON:0003056!4.89e-09!49;UBERON:0002020!2.52e-08!34;UBERON:0003080!1.71e-07!40;UBERON:0002780!5.44e-07!39;UBERON:0001890!5.44e-07!39;UBERON:0006240!5.44e-07!39;UBERON:0002791!6.39e-07!29;UBERON:0003528!6.39e-07!29;UBERON:0001893!6.39e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.17e-15,92;UBERON:0004111,4.02e-14,122;UBERON:0000073,1.51e-13,54;UBERON:0000025,5.69e-13,114;UBERON:0002346,7.45e-13,64;UBERON:0003075,7.45e-13,64;UBERON:0007284,7.45e-13,64;UBERON:0010371,8.69e-13,73;UBERON:0004121,1.01e-12,95;UBERON:0000924,1.01e-12,95;UBERON:0006601,1.01e-12,95;UBERON:0001049,1.66e-12,52;UBERON:0005068,1.66e-12,52;UBERON:0006241,1.66e-12,52;UBERON:0007135,1.66e-12,52;UBERON:0001017,2.72e-12,73;UBERON:0001016,1.98e-11,75;UBERON:0000955,8.35e-11,47;UBERON:0006238,8.35e-11,47;UBERON:0002616,3.02e-10,46;UBERON:0003056,2.19e-09,49;UBERON:0002020,2.09e-08,34;UBERON:0003080,1.28e-07,40;UBERON:0002780,4.72e-07,39;UBERON:0001890,4.72e-07,39;UBERON:0006240,4.72e-07,39;UBERON:0003528,8.71e-07,29;UBERON:0002791,8.71e-07,29;UBERON:0001893,8.71e-07,29|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.411343300817216,0.42438965179803,0.340173160604279,0.198581902401771,0,0,0.45881856213434,0,0,0,0,0,0,0,1.84519436275371,0,0,0,0,0.837063261473815,0,1.0470474879476,0.588231488031014,0,0.971020706062307,1.76255545165808,2.02753862439029,0.367093504323363,3.12956537739216,1.74420125104357,0.659058548203415,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.41621522601718,5.28990979272033,3.1691570175309,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,3.07374644257244,1.45165457231869,1.4850653216486,0.841299845405528,1.99955689082663,2.42955395046775,2.69479758272899,1.24599112323707,0.919218786610021,2.20231761998777,2.17068474744819,2.15049146558741,2.1101806036831,2.19570344645783,2.6045668527838,2.23346399201105,1.12552522006336,1.98637722109853,1.76777151284201,1.13897344639282,1.67759501242771,0.151452386666368,0.755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,0.280888840263504,1.53387290320252,0.779358013808606,1.06001872353102,1.83096445709685,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0,0.517875767294343,0.890652834388949,1.21439728736295,1.21786191324856,0.230615497256059,0.904335843315735,0.23517741427141,0.376999773989026,0.741584903203122,1.01219549843938,0.884610551949874,1.61766849947409,0.662524555381181,0,0,2.04946557908083,1.46612694769419,0.255457055208591,0.838705871541442,0.599902730993408,0.508280908292259,3.2953940669061,3.66000482254901,1.38219787324151,2.78118912307642,1.53429274398198,3.32460871295296,2.10913641988085,1.12023300235348,0.373220911830279,0.505445516867349,0.420883711772948,1.82168620147785,1.37941262660084,1.80062129805349,1.20563854268572,1.02054748726992,2.3060469651273,2.15513966487376,1.81092359517311,1.94011193639558,1.13463648100692,0.703804496655795,1.31517439456545,1.11218899690239,2.78601733217733,0.61734640922383,1.99034266818493,2.1066395619397,0,0.568326998791185,2.69263504296152,3.04883877975425,1.2604344302271,1.42046841351126,2.75469924446365,2.62254091908543,2.09280550275367,2.68273401399619,1.5179494507732,4.11399624783701,2.29834449710733,1.21603214318784,1.16959989940266,1.97595103761946,0.268412837520744,2.73376933133365,2.05809224758569,0.330418782983798,0.528901133327089,1.06644125267617,0.232236671860439,0.77320476793256,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0,0.648414149624083,0,1.89667900953082,0.571242563048644,0,1.4255592949172,0.581857461502877,1.05203729835478,1.20149420536089,1.32849133181642,0.627994911365499,0.370191491765402,0.296452627087149,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,1.15078454980324,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22142
|HGNC=
|TSSclassifier=NA
|UniProt=P68369
|association_with_transcript=-46bp_to_ENSMUST00000097014,ENSMUST00000136329_5end
|cluster_id=chr15:98784028..98784038,-
|description=CAGE_peak_7_at_Tuba1a_5end
|id=chr15:98784028..98784038,-
|ontology_enrichment_celltype=CL:0000117!3.94e-08!23;CL:0000337!3.94e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-08,23;CL:0000337,1.96e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.56e-13!63;UBERON:0001017!6.39e-13!73;UBERON:0005743!6.39e-13!73;UBERON:0004121!1.10e-12!102;UBERON:0000924!1.10e-12!102;UBERON:0006601!1.10e-12!102;UBERON:0004111!3.26e-12!122;UBERON:0000073!3.53e-12!75;UBERON:0001016!3.53e-12!75;UBERON:0001049!9.96e-12!52;UBERON:0005068!9.96e-12!52;UBERON:0006241!9.96e-12!52;UBERON:0007135!9.96e-12!52;UBERON:0000955!1.33e-11!50;UBERON:0006238!1.33e-11!50;UBERON:0000025!3.72e-11!114;UBERON:0002616!4.25e-11!49;UBERON:0002346!4.65e-11!71;UBERON:0003075!4.65e-11!71;UBERON:0007284!4.65e-11!71;UBERON:0003056!4.89e-09!49;UBERON:0002020!2.52e-08!34;UBERON:0003080!1.71e-07!40;UBERON:0002780!5.44e-07!39;UBERON:0001890!5.44e-07!39;UBERON:0006240!5.44e-07!39;UBERON:0002791!6.39e-07!29;UBERON:0003528!6.39e-07!29;UBERON:0001893!6.39e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.17e-15,92;UBERON:0004111,4.02e-14,122;UBERON:0000073,1.51e-13,54;UBERON:0000025,5.69e-13,114;UBERON:0002346,7.45e-13,64;UBERON:0003075,7.45e-13,64;UBERON:0007284,7.45e-13,64;UBERON:0010371,8.69e-13,73;UBERON:0004121,1.01e-12,95;UBERON:0000924,1.01e-12,95;UBERON:0006601,1.01e-12,95;UBERON:0001049,1.66e-12,52;UBERON:0005068,1.66e-12,52;UBERON:0006241,1.66e-12,52;UBERON:0007135,1.66e-12,52;UBERON:0001017,2.72e-12,73;UBERON:0001016,1.98e-11,75;UBERON:0000955,8.35e-11,47;UBERON:0006238,8.35e-11,47;UBERON:0002616,3.02e-10,46;UBERON:0003056,2.19e-09,49;UBERON:0002020,2.09e-08,34;UBERON:0003080,1.28e-07,40;UBERON:0002780,4.72e-07,39;UBERON:0001890,4.72e-07,39;UBERON:0006240,4.72e-07,39;UBERON:0003528,8.71e-07,29;UBERON:0002791,8.71e-07,29;UBERON:0001893,8.71e-07,29
|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.411343300817216,0.42438965179803,0.340173160604279,0.198581902401771,0,0,0.45881856213434,0,0,0,0,0,0,0,1.84519436275371,0,0,0,0,0.837063261473815,0,1.0470474879476,0.588231488031014,0,0.971020706062307,1.76255545165808,2.02753862439029,0.367093504323363,3.12956537739216,1.74420125104357,0.659058548203415,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,1.41621522601718,5.28990979272033,3.1691570175309,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,3.07374644257244,1.45165457231869,1.4850653216486,0.841299845405528,1.99955689082663,2.42955395046775,2.69479758272899,1.24599112323707,0.919218786610021,2.20231761998777,2.17068474744819,2.15049146558741,2.1101806036831,2.19570344645783,2.6045668527838,2.23346399201105,1.12552522006336,1.98637722109853,1.76777151284201,1.13897344639282,1.67759501242771,0.151452386666368,0.755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,0.280888840263504,1.53387290320252,0.779358013808606,1.06001872353102,1.83096445709685,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0,0.517875767294343,0.890652834388949,1.21439728736295,1.21786191324856,0.230615497256059,0.904335843315735,0.23517741427141,0.376999773989026,0.741584903203122,1.01219549843938,0.884610551949874,1.61766849947409,0.662524555381181,0,0,2.04946557908083,1.46612694769419,0.255457055208591,0.838705871541442,0.599902730993408,0.508280908292259,3.2953940669061,3.66000482254901,1.38219787324151,2.78118912307642,1.53429274398198,3.32460871295296,2.10913641988085,1.12023300235348,0.373220911830279,0.505445516867349,0.420883711772948,1.82168620147785,1.37941262660084,1.80062129805349,1.20563854268572,1.02054748726992,2.3060469651273,2.15513966487376,1.81092359517311,1.94011193639558,1.13463648100692,0.703804496655795,1.31517439456545,1.11218899690239,2.78601733217733,0.61734640922383,1.99034266818493,2.1066395619397,0,0.568326998791185,2.69263504296152,3.04883877975425,1.2604344302271,1.42046841351126,2.75469924446365,2.62254091908543,2.09280550275367,2.68273401399619,1.5179494507732,4.11399624783701,2.29834449710733,1.21603214318784,1.16959989940266,1.97595103761946,0.268412837520744,2.73376933133365,2.05809224758569,0.330418782983798,0.528901133327089,1.06644125267617,0.232236671860439,0.77320476793256,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0.502670417600539,0.397912944082302,0.58489226135736,0,0.648414149624083,0,1.89667900953082,0.571242563048644,0,1.4255592949172,0.581857461502877,1.05203729835478,1.20149420536089,1.32849133181642,0.627994911365499,0.370191491765402,0.296452627087149,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,1.15078454980324,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.757736633841335,0,0,2.95605104266567,1.89491411770485,1.46668478797823,2.54617628662782,1.64283173801951,1.17254380209271,1.90434912708811,1.36593553500459,2.52216230569906,3.98636441367795,1.2756381492599,2.62181303545181,2.07221978239075,0.723245292907558,1.50791283939272,0,0.491764273019036,1.37968373152366,3.37156238974363,1.99259867206745,0.491804836130026,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,2.57057053137446,0.851640511249612,1.95872164033981,1.79175655288934,1.15479086080775,0,4.61283208694465,0.906970670894253,0.754420319023592,1.47650946440386,1.22974059177571,0.258428293168221,0,1.06949213515416,0.948110273807448,1.05418608574999,0,0.340439605753788,1.08036656418786,1.16422815404479,1.07168517515796,0.532020700926821,0.178368817602071,1.48094118541909,1.8267896946876,1.17335854031855,3.1774810629573,1.10264199027481,0.32977250588296,0.645857706783622,1.56813604813205,1.19372344003136,1.14898629821543,0,2.22510362412612,0.854354403989263,1.03193433981611,1.11116716421827,0,0.27338845544205,0.457556346413045,0.679913719975421,1.39951452323658,1.38199973804424,0.954670618015114,1.42351197111511,1.82987520414164,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,1.24267862617385,0,1.04661582230785,1.15820943319968,1.55560950675238,1.6790777052105,1.68956125490778,0.938857909166032,0.781226309063701,1.25831213310853,0.724752362478018,0.576060012515731,0.632022241256357,0.202725215290164,0.205421914329655,0.649604114888975,0.358053391334963,0.596044064343795,0.360586348559907,0,0.302899349844443,0.381034033274999,0.504130925684203,0.194915761479505,0.384847366561318,0.233753804363138,0.453460767230423,0,0.179427713218951,0.167884616364078,1.9318959403219,1.12609485270709,0.549454872801795,0.428736758158132,2.50786052017682,2.25900737046827,1.84130094602871,1.71868654031819,1.89038500578056,0,2.2661816921691,0.675022500231806,2.2516060161211,1.81256963593682,1.03552062350364,1.24544817101012,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.367687016900028,1.11123363900808,1.03017528619447,1.60459604795908,0.758091635291392,0.25347929989024,0.943131706930381,1.21733959710847,0.576226371643824,0.631790158511746,1.90517476513229,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0.941093804153306,1.26921911837515,0.365855945745545,1.57841826862706,0.814824683075171,1.12228454331548,0.355905054372522,0.886540341380071,0.818462086339379,1.23949472948773,1.35034627686799,2.99772693525535,0.467863216890817,0.859484216193193,1.3390183244819,1.76473135295612,1.15933917810211
|short_description=p7@Tuba1a
}}

Latest revision as of 13:32, 1 October 2015

Short description:p7@Tuba1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Tuba1a_5end
Coexpression cluster:NA
Association with transcript: -46bp_to_ENSMUST00000097014, ENSMUST00000136329_5end
EntrezGene:Tuba1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Tuba1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.96e-0823
neuroblast (sensu Vertebrata)1.96e-0823

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.17e-1592
anatomical conduit4.02e-14122
regional part of nervous system1.51e-1354
tube5.69e-13114
neurectoderm7.45e-1364
neural plate7.45e-1364
presumptive neural plate7.45e-1364
ecto-epithelium8.69e-1373
ectoderm-derived structure1.01e-1295
ectoderm1.01e-1295
presumptive ectoderm1.01e-1295
neural tube1.66e-1252
neural rod1.66e-1252
future spinal cord1.66e-1252
neural keel1.66e-1252
central nervous system2.72e-1273
nervous system1.98e-1175
brain8.35e-1147
future brain8.35e-1147
regional part of brain3.02e-1046
pre-chordal neural plate2.19e-0949
gray matter2.09e-0834
anterior neural tube1.28e-0740
regional part of forebrain4.72e-0739
forebrain4.72e-0739
future forebrain4.72e-0739
brain grey matter8.71e-0729
regional part of telencephalon8.71e-0729
telencephalon8.71e-0729
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