Personal tools

FFCP PHASE1:Mm9::chr1:69155109..69155151,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13869
|EntrezGene=13869
|HGNC=
|HGNC=
|MCL_coexpression_id=983
|TSSclassifier=NA
|UniProt=Q61527
|UniProt=Q61527
|association_with_transcript=-476bp_to_ENSMUST00000121473,NM_010154,uc007bjb.1_5end
|association_with_transcript=-476bp_to_ENSMUST00000121473,NM_010154,uc007bjb.1_5end
|cluster_id=chr1:69155109..69155151,-
|description=CAGE_peak_1_at_Erbb4_5end
|description=CAGE_peak_1_at_Erbb4_5end
|id=chr1:69155109..69155151,-
|id=chr1:69155109..69155151,-
|ontology_enrichment_celltype=CL:0000117!2.25e-08!23;CL:0000337!2.25e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-09,23;CL:0000337,2.48e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.27e-15!63;UBERON:0001049!4.82e-14!52;UBERON:0005068!4.82e-14!52;UBERON:0006241!4.82e-14!52;UBERON:0007135!4.82e-14!52;UBERON:0000955!9.08e-14!50;UBERON:0006238!9.08e-14!50;UBERON:0001017!9.58e-14!73;UBERON:0005743!9.58e-14!73;UBERON:0002616!3.67e-13!49;UBERON:0000073!5.87e-13!75;UBERON:0001016!5.87e-13!75;UBERON:0000025!9.04e-13!114;UBERON:0004111!1.30e-12!122;UBERON:0002346!1.97e-11!71;UBERON:0003075!1.97e-11!71;UBERON:0007284!1.97e-11!71;UBERON:0004121!2.42e-11!102;UBERON:0000924!2.42e-11!102;UBERON:0006601!2.42e-11!102;UBERON:0003056!2.81e-11!49;UBERON:0002020!4.81e-11!34;UBERON:0003080!1.05e-10!40;UBERON:0003103!3.30e-10!43;UBERON:0002780!3.63e-10!39;UBERON:0001890!3.63e-10!39;UBERON:0006240!3.63e-10!39;UBERON:0002791!3.34e-09!29;UBERON:0003528!3.34e-09!29;UBERON:0001893!3.34e-09!29;UBERON:0000468!1.19e-07!333;UBERON:0007100!1.61e-07!18;UBERON:0000948!1.61e-07!18;UBERON:0005498!1.61e-07!18;UBERON:0004140!1.61e-07!18;UBERON:0009881!1.61e-07!18;UBERON:0004141!1.61e-07!18;UBERON:0003084!1.61e-07!18;UBERON:0007005!1.61e-07!18;UBERON:0004139!1.61e-07!18;UBERON:0004291!1.61e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.58e-20,92;UBERON:0000073,1.49e-17,54;UBERON:0001049,2.57e-16,52;UBERON:0005068,2.57e-16,52;UBERON:0006241,2.57e-16,52;UBERON:0007135,2.57e-16,52;UBERON:0002346,3.22e-15,64;UBERON:0003075,3.22e-15,64;UBERON:0007284,3.22e-15,64;UBERON:0000955,4.05e-14,47;UBERON:0006238,4.05e-14,47;UBERON:0001017,6.84e-14,73;UBERON:0010371,8.62e-14,73;UBERON:0002616,1.92e-13,46;UBERON:0001016,6.13e-13,75;UBERON:0002020,8.61e-13,34;UBERON:0003056,9.36e-13,49;UBERON:0004121,1.38e-12,95;UBERON:0000924,1.38e-12,95;UBERON:0006601,1.38e-12,95;UBERON:0003080,4.14e-12,40;UBERON:0002780,1.71e-11,39;UBERON:0001890,1.71e-11,39;UBERON:0006240,1.71e-11,39;UBERON:0003103,7.91e-11,43;UBERON:0003528,1.11e-10,29;UBERON:0002791,1.11e-10,29;UBERON:0001893,1.11e-10,29;UBERON:0000025,1.94e-10,114;UBERON:0004111,4.98e-10,122;UBERON:0007100,2.57e-08,18;UBERON:0000948,2.57e-08,18;UBERON:0005498,2.57e-08,18;UBERON:0004140,2.57e-08,18;UBERON:0009881,2.57e-08,18;UBERON:0004141,2.57e-08,18;UBERON:0003084,2.57e-08,18;UBERON:0007005,2.57e-08,18;UBERON:0004139,2.57e-08,18;UBERON:0004291,2.57e-08,18;UBERON:0004535,4.84e-07,23;UBERON:0001009,4.84e-07,23;UBERON:0000956,6.36e-07,21;UBERON:0001869,6.36e-07,21;UBERON:0000203,6.36e-07,21
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,7.48570905180512,5.28990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0.898800331555214,4.2264013585371,4.97710139080693,2.02508907497536,2.73422449756797,5.14171771926846,6.62605622854841,5.87955836231779,2.77951865952885,4.5960939330501,12.1127469099328,11.6195477657521,15.6678663921368,7.91317726381163,1.46380229763855,9.89735404057844,9.77140496504833,18.0084035210138,14.515833538797,7.95497180778903,10.9626194215309,6.33758115806022,0,0.377857800533928,12.1743085254705,1.72084775396277,0,0,0.649776417447669,0.896053774194671,1.12355536105401,0,0,0,4.3661460130771,0,0,7.11066703153331,0,0,0,2.62622923353838,0,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,6.07317299063629,0,1.61766849947409,0.441683036920787,0,0,11.7112318804619,25.3430515244281,0,0,0,0,14.9790639404823,11.4375150704657,10.6806199295935,15.4703644971126,11.5071955798649,13.5062228963714,18.3332627266566,1.2220723662038,0.870848794270651,0.505445516867349,3.78795340595653,2.21204753036596,1.14951052216736,1.44049703844279,3.0140963567143,3.12967896096108,3.07472928683639,2.34254311399322,2.84573707812917,0.215567992932842,0.945530400839096,2.81521798662318,0.876782929710299,1.66828349535359,2.78601733217733,1.23469281844766,2.18937693500343,0,0,0,24.2337153866537,15.0096678387902,19.2666405763286,18.7028341112316,18.2990735525086,20.3632589011339,16.7424440220294,17.7060444923749,18.7992201211143,16.9496645410885,10.342550236983,8.75543143095242,9.64919917007193,7.68425403518677,7.91817870686193,9.2527577368216,7.20332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,1.13800740571849,7.5404018322421,11.270773567308,8.75700709734851,9.89157684554891,15.850695295212,19.0974342115257,11.3659813944294,15.2288766006134,8.14421281883883,1.77871576252289,0.667380422864376,0.786235980452812,0,0.405720242777006,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0,0.184753190166605,3.03186258832776,1.79261474086228,2.54617628662782,0.938760993154008,1.84256883185997,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,2.95058563811422,7.45029215022778,14.6101036888891,20.3948334670434,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0.395287777946524,17.0300297703558,0.425820255624806,0.534196811001766,0.977321756121456,1.15479086080775,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,1.29214146584111,2.54473610634254,1.78248689192361,1.26414703174326,5.27093042874994,2.06271086496374,4.08527526904546,2.70091641046965,0.258717367565509,1.07168517515796,2.30542303734956,3.0322698992352,3.1264313914403,1.2178597964584,0,0,0.661585194164886,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0,16.8737024829564,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0,3.72803587852155,0.56369293868419,2.69129782879162,3.14371131868485,4.27792614356905,3.09983576346555,5.23763989021412,6.10257640957921,7.42164993610516,5.24296722128554,1.44950472495604,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0.772758376128762,5.81815673898664,0.549454872801795,0,0,9.03602948187307,11.9684561491866,10.8850147553485,8.248952752497,6.16574267793578,6.7985450765073,6.07520250208625,9.00642406448441,12.2348450425735,7.7664046762773,1.3492355185943,4.38927360741134,4.78054096111576,4.61902762429759,1.67690530102386,1.2869045591501,4.00044110042907,2.26638562962784,3.53011130550997,5.81203587056734,3.54871019846336,3.77252682772152,4.68207537349412,4.92993673517493,5.45636955078326,7.1444053692461,5.67833197129792,5.59436739344745,2.88460130562315,5.4463600449727,4.80016953339582,4.79184676630211,5.00715998889374,5.23247099876383,4.79957840118186,6.8537832392258,6.40247905054704,4.47218509444333,5.02475221229689,3.36685362994643,3.91495559809775,6.00877342490937,6.13846564754534,7.12709469455443,4.82266527452853,5.49583271463481,3.50897412668113,3.00819475667618,1.91288332068843,2.42650561031467,2.08681052058379
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,7.48570905180512,5.28990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0.898800331555214,4.2264013585371,4.97710139080693,2.02508907497536,2.73422449756797,5.14171771926846,6.62605622854841,5.87955836231779,2.77951865952885,4.5960939330501,12.1127469099328,11.6195477657521,15.6678663921368,7.91317726381163,1.46380229763855,9.89735404057844,9.77140496504833,18.0084035210138,14.515833538797,7.95497180778903,10.9626194215309,6.33758115806022,0,0.377857800533928,12.1743085254705,1.72084775396277,0,0,0.649776417447669,0.896053774194671,1.12355536105401,0,0,0,4.3661460130771,0,0,7.11066703153331,0,0,0,2.62622923353838,0,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,6.07317299063629,0,1.61766849947409,0.441683036920787,0,0,11.7112318804619,25.3430515244281,0,0,0,0,14.9790639404823,11.4375150704657,10.6806199295935,15.4703644971126,11.5071955798649,13.5062228963714,18.3332627266566,1.2220723662038,0.870848794270651,0.505445516867349,3.78795340595653,2.21204753036596,1.14951052216736,1.44049703844279,3.0140963567143,3.12967896096108,3.07472928683639,2.34254311399322,2.84573707812917,0.215567992932842,0.945530400839096,2.81521798662318,0.876782929710299,1.66828349535359,2.78601733217733,1.23469281844766,2.18937693500343,0,0,0,24.2337153866537,15.0096678387902,19.2666405763286,18.7028341112316,18.2990735525086,20.3632589011339,16.7424440220294,17.7060444923749,18.7992201211143,16.9496645410885,10.342550236983,8.75543143095242,9.64919917007193,7.68425403518677,7.91817870686193,9.2527577368216,7.20332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,1.13800740571849,7.5404018322421,11.270773567308,8.75700709734851,9.89157684554891,15.850695295212,19.0974342115257,11.3659813944294,15.2288766006134,8.14421281883883,1.77871576252289,0.667380422864376,0.786235980452812,0,0.405720242777006,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0,0.184753190166605,3.03186258832776,1.79261474086228,2.54617628662782,0.938760993154008,1.84256883185997,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,2.95058563811422,7.45029215022778,14.6101036888891,20.3948334670434,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0.395287777946524,17.0300297703558,0.425820255624806,0.534196811001766,0.977321756121456,1.15479086080775,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,1.29214146584111,2.54473610634254,1.78248689192361,1.26414703174326,5.27093042874994,2.06271086496374,4.08527526904546,2.70091641046965,0.258717367565509,1.07168517515796,2.30542303734956,3.0322698992352,3.1264313914403,1.2178597964584,0,0,0.661585194164886,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0,16.8737024829564,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0,3.72803587852155,0.56369293868419,2.69129782879162,3.14371131868485,4.27792614356905,3.09983576346555,5.23763989021412,6.10257640957921,7.42164993610516,5.24296722128554,1.44950472495604,0.576060012515731,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0.772758376128762,5.81815673898664,0.549454872801795,0,0,9.03602948187307,11.9684561491866,10.8850147553485,8.248952752497,6.16574267793578,6.7985450765073,6.07520250208625,9.00642406448441,12.2348450425735,7.7664046762773,1.3492355185943,4.38927360741134,4.78054096111576,4.61902762429759,1.67690530102386,1.2869045591501,4.00044110042907,2.26638562962784,3.53011130550997,5.81203587056734,3.54871019846336,3.77252682772152,4.68207537349412,4.92993673517493,5.45636955078326,7.1444053692461,5.67833197129792,5.59436739344745,2.88460130562315,5.4463600449727,4.80016953339582,4.79184676630211,5.00715998889374,5.23247099876383,4.79957840118186,6.8537832392258,6.40247905054704,4.47218509444333,5.02475221229689,3.36685362994643,3.91495559809775,6.00877342490937,6.13846564754534,7.12709469455443,4.82266527452853,5.49583271463481,3.50897412668113,3.00819475667618,1.91288332068843,2.42650561031467,2.08681052058379
|short_description=p1@Erbb4
|short_description=p1@Erbb4
}}
}}

Latest revision as of 12:54, 1 October 2015

Short description:p1@Erbb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Erbb4_5end
Coexpression cluster:MCL_coexpression_mm9:983
Association with transcript: -476bp_to_ENSMUST00000121473, NM_010154, uc007bjb.1_5end
EntrezGene:Erbb4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Erbb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I225.34
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.98
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E924.23
heart, embryo E12.CNhs11015.353-12F515.01
heart, embryo E13.CNhs11013.376-3I919.27
heart, embryo E14.CNhs10597.403-26D418.70
heart, embryo E15.CNhs11017.431-16C818.30
heart, embryo E16.CNhs11021.457-17C620.36
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E318.80
heart, neonate N03.CNhs11221.1349-25I216.95
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G18.76
heart, neonate N20.CNhs11127.821-26I69.65
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D27.92
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F87.54
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G715.85
kidney, neonate N10.CNhs11206.758-6D519.10
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F315.23
kidney, neonate N30.CNhs11203.1385-42H18.14
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C214.61
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I47.42
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.48e-0923
neuroblast (sensu Vertebrata)2.48e-0923

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.58e-2092
regional part of nervous system1.49e-1754
neural tube2.57e-1652
neural rod2.57e-1652
future spinal cord2.57e-1652
neural keel2.57e-1652
neurectoderm3.22e-1564
neural plate3.22e-1564
presumptive neural plate3.22e-1564
brain4.05e-1447
future brain4.05e-1447
central nervous system6.84e-1473
ecto-epithelium8.62e-1473
regional part of brain1.92e-1346
nervous system6.13e-1375
gray matter8.61e-1334
pre-chordal neural plate9.36e-1349
ectoderm-derived structure1.38e-1295
ectoderm1.38e-1295
presumptive ectoderm1.38e-1295
anterior neural tube4.14e-1240
regional part of forebrain1.71e-1139
forebrain1.71e-1139
future forebrain1.71e-1139
compound organ7.91e-1143
brain grey matter1.11e-1029
regional part of telencephalon1.11e-1029
telencephalon1.11e-1029
tube1.94e-10114
anatomical conduit4.98e-10122
primary circulatory organ2.57e-0818
heart2.57e-0818
primitive heart tube2.57e-0818
primary heart field2.57e-0818
anterior lateral plate mesoderm2.57e-0818
heart tube2.57e-0818
heart primordium2.57e-0818
cardiac mesoderm2.57e-0818
cardiogenic plate2.57e-0818
heart rudiment2.57e-0818
cardiovascular system4.84e-0723
circulatory system4.84e-0723
cerebral cortex6.36e-0721
cerebral hemisphere6.36e-0721
pallium6.36e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:69155109..69155151,-&oldid=4304025"