FFCP PHASE1:Mm9::chr8:114060693..114060726,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170737 | |EntrezGene=170737 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q91V17 | |UniProt=Q91V17 | ||
|association_with_transcript=-15bp_to_ENSMUST00000095176_5end | |association_with_transcript=-15bp_to_ENSMUST00000095176_5end | ||
|cluster_id=chr8:114060693..114060726,+ | |||
|description=CAGE_peak_3_at_Znrf1_5end | |description=CAGE_peak_3_at_Znrf1_5end | ||
|id=chr8:114060693..114060726,+ | |id=chr8:114060693..114060726,+ | ||
|ontology_enrichment_celltype=CL:0002320!6.61e-07!46;CL:0000134!6.61e-07!46 | |ontology_enrichment_celltype=CL:0002320!6.61e-07!46;CL:0000134!6.61e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.42e-12,46;CL:0000134,1.42e-12,46;CL:0000988,2.10e-10,32;CL:0002032,2.10e-10,32;CL:0000037,2.10e-10,32;CL:0000837,2.10e-10,32;CL:0000219,4.60e-10,54;CL:0000557,9.79e-08,7;CL:0000738,1.75e-07,17;CL:0002087,1.75e-07,17;CL:0000084,7.62e-07,11;CL:0000827,7.62e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.62e-12!48;UBERON:0002390!7.74e-12!45;UBERON:0003061!7.74e-12!45;UBERON:0002405!2.00e-10!70;UBERON:0003081!1.75e-07!88;UBERON:0004177!2.12e-07!29;UBERON:0002384!6.61e-07!46 | |ontology_enrichment_uberon=UBERON:0002193!2.62e-12!48;UBERON:0002390!7.74e-12!45;UBERON:0003061!7.74e-12!45;UBERON:0002405!2.00e-10!70;UBERON:0003081!1.75e-07!88;UBERON:0004177!2.12e-07!29;UBERON:0002384!6.61e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-16,45;UBERON:0003061,1.74e-16,45;UBERON:0002370,2.07e-15,23;UBERON:0000974,2.07e-15,23;UBERON:0004807,2.07e-15,23;UBERON:0005058,2.07e-15,23;UBERON:0003351,2.07e-15,23;UBERON:0009113,2.07e-15,23;UBERON:0003295,2.07e-15,23;UBERON:0009722,2.07e-15,23;UBERON:0005562,2.07e-15,23;UBERON:0007690,2.07e-15,23;UBERON:0002193,3.83e-15,48;UBERON:0002405,3.83e-15,48;UBERON:0006562,1.23e-14,24;UBERON:0003408,1.23e-14,24;UBERON:0001557,1.23e-14,24;UBERON:0001042,1.23e-14,24;UBERON:0008814,1.23e-14,24;UBERON:0009145,1.23e-14,24;UBERON:0000072,1.17e-12,27;UBERON:0002384,1.42e-12,46;UBERON:0004177,1.43e-11,29;UBERON:0005057,1.43e-11,29;UBERON:0000077,1.45e-10,35;UBERON:0003081,7.66e-09,87;UBERON:0007811,1.00e-08,36;UBERON:0000065,2.67e-07,41;UBERON:0001004,4.68e-07,42;UBERON:0000153,7.97e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,4.51931632045517,0.422366166455,0,0,0,3.42401459862411,2.53519167015092,0,0.202475267389826,0.699561878128147,0.315462165358238,0.137114433605739,0,0.765389611359628,1.39007331681239,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,2.09409497589519,3.52938892818609,5.46436387966757,3.88408282424923,0,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,0,5.07753499407941,1.68046899571232,0.771778308107841,0,0,0,0,0,1.0165335962074,0,2.2497492932035,0.988866362566974,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0.420649922702764,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.170430322578058,0,1.06001872353102,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.776813650941515,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,0.161766849947409,0.883366073841574,1.93950101254089,0,0.292780797011547,0.628340120440365,0,1.67741174308288,2.99951365496704,1.01656181658452,0.299581278809645,0.457500602818626,0,0.695297280769106,0.255715457330331,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0,0.157635144106191,0,0,0.655453258862952,0.172684981865896,0.289298117163023,9.04747703635634,3.26343410291226,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,1.53946597556024,1.65839968565309,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0.288030006257865,8.53230025696081,0.608175645870493,0.102710957164827,0.649604114888975,2.32734704367726,5.36439657909415,3.12508168751919,4.57837534241189,5.85605409699256,4.41999478598999,5.54544018252623,4.97035191772737,6.63861707318273,7.59699864180198,0,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0.859265911718438,1.37016503954128,0,0,0,0.906284817968409,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0,0,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,4.51931632045517,0.422366166455,0,0,0,3.42401459862411,2.53519167015092,0,0.202475267389826,0.699561878128147,0.315462165358238,0.137114433605739,0,0.765389611359628,1.39007331681239,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,2.09409497589519,3.52938892818609,5.46436387966757,3.88408282424923,0,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,0,5.07753499407941,1.68046899571232,0.771778308107841,0,0,0,0,0,1.0165335962074,0,2.2497492932035,0.988866362566974,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0.420649922702764,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.170430322578058,0,1.06001872353102,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.776813650941515,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,0.161766849947409,0.883366073841574,1.93950101254089,0,0.292780797011547,0.628340120440365,0,1.67741174308288,2.99951365496704,1.01656181658452,0.299581278809645,0.457500602818626,0,0.695297280769106,0.255715457330331,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0,0.157635144106191,0,0,0.655453258862952,0.172684981865896,0.289298117163023,9.04747703635634,3.26343410291226,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,1.53946597556024,1.65839968565309,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0.288030006257865,8.53230025696081,0.608175645870493,0.102710957164827,0.649604114888975,2.32734704367726,5.36439657909415,3.12508168751919,4.57837534241189,5.85605409699256,4.41999478598999,5.54544018252623,4.97035191772737,6.63861707318273,7.59699864180198,0,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0.859265911718438,1.37016503954128,0,0,0,0.906284817968409,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0,0,0,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Znrf1 | |short_description=p3@Znrf1 | ||
}} | }} |
Latest revision as of 12:50, 1 October 2015
Short description: | p3@Znrf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Znrf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -15bp_to_ENSMUST00000095176_5end |
EntrezGene: | Znrf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.42e-12 | 46 |
mesenchymal cell | 1.42e-12 | 46 |
hematopoietic cell | 2.10e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.10e-10 | 32 |
hematopoietic stem cell | 2.10e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.10e-10 | 32 |
motile cell | 4.60e-10 | 54 |
granulocyte monocyte progenitor cell | 9.79e-08 | 7 |
leukocyte | 1.75e-07 | 17 |
nongranular leukocyte | 1.75e-07 | 17 |
T cell | 7.62e-07 | 11 |
pro-T cell | 7.62e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-16 | 45 |
blood island | 1.74e-16 | 45 |
thymus | 2.07e-15 | 23 |
neck | 2.07e-15 | 23 |
respiratory system epithelium | 2.07e-15 | 23 |
hemolymphoid system gland | 2.07e-15 | 23 |
pharyngeal epithelium | 2.07e-15 | 23 |
thymic region | 2.07e-15 | 23 |
pharyngeal gland | 2.07e-15 | 23 |
entire pharyngeal arch endoderm | 2.07e-15 | 23 |
thymus primordium | 2.07e-15 | 23 |
early pharyngeal endoderm | 2.07e-15 | 23 |
hemolymphoid system | 3.83e-15 | 48 |
immune system | 3.83e-15 | 48 |
pharynx | 1.23e-14 | 24 |
gland of gut | 1.23e-14 | 24 |
upper respiratory tract | 1.23e-14 | 24 |
chordate pharynx | 1.23e-14 | 24 |
pharyngeal arch system | 1.23e-14 | 24 |
pharyngeal region of foregut | 1.23e-14 | 24 |
segment of respiratory tract | 1.17e-12 | 27 |
connective tissue | 1.42e-12 | 46 |
hemopoietic organ | 1.43e-11 | 29 |
immune organ | 1.43e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 1.45e-10 | 35 |
lateral plate mesoderm | 7.66e-09 | 87 |
craniocervical region | 1.00e-08 | 36 |
respiratory tract | 2.67e-07 | 41 |
respiratory system | 4.68e-07 | 42 |
anterior region of body | 7.97e-07 | 43 |