FFCP PHASE1:Mm9::chr8:113871970..113871981,-: Difference between revisions
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{{FFCP|EntrezGene=338521|HGNC=|MCL_coexpression_id=2475|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000162216_5end|description=CAGE_peak_6_at_Fa2h_5end|id=chr8:113871970..113871981,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,3.50e-18,3;CL:0002614,7.76e-09,3;CL:0000117,8.25e-09,23;CL:0000337,8.25e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.23e-09!102;UBERON:0000924!1.23e-09!102;UBERON:0006601!1.23e-09!102;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0003076!1.77e-08!12;UBERON:0003057!1.77e-08!12;UBERON:0000073!1.87e-08!75;UBERON:0001016!1.87e-08!75;UBERON:0002616!2.37e-08!49;UBERON:0000955!4.32e-08!50;UBERON:0006238!4.32e-08!50;UBERON:0001017!4.60e-08!73;UBERON:0005743!4.60e-08!73;UBERON:0000033!6.00e-08!63;UBERON:0002298!6.94e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.50e-18,3;UBERON:0002275,3.50e-18,3;UBERON:0002038,7.76e-09,3;UBERON:0009663,7.76e-09,3;UBERON:0009661,7.76e-09,3;UBERON:0000125,7.76e-09,3;UBERON:0002308,7.76e-09,3;UBERON:0001044,1.38e-07,1;UBERON:0001736,1.38e-07,1;UBERON:0003293,1.38e-07,1;UBERON:0003294,1.38e-07,1;UBERON:0001829,1.38e-07,1;UBERON:0010047,1.38e-07,1;UBERON:0000167,1.38e-07,1;UBERON:0006298,1.38e-07,1;UBERON:0001153,1.59e-07,1;UBERON:0001045,1.59e-07,1;UBERON:0002420,4.03e-07,8;UBERON:0007245,4.03e-07,8;UBERON:0010009,4.03e-07,8;UBERON:0010011,4.03e-07,8;UBERON:0000454,4.03e-07,8;UBERON:0002950,7.79e-07,4;UBERON:0001891,7.79e-07,4;UBERON:0009616,7.79e-07,4;UBERON:0010286,7.79e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.856952953211411,1.32521124570968,0,0,0,1.10115880999389,2.93680877595932,1.99688493233117,0,0,0,2.51264699101243,0,1.83357897332172,0,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,1.37250180845588,0.125654352112864,0.347648640384553,0,0.41557608911912,0.811206315338788,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0,0.422190474497091,0,0.820704498725306,0,3.52308073819968,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.247960367176008,0.26175594198403,1.68499465279331,4.34937519160848,5.07323644815771,0,0,0,0,0,0,0,0,0.483168241652012,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p6@Fa2h}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=338521 | |||
|HGNC= | |||
|MCL_coexpression_id=2475 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000162216_5end | |||
|cluster_id=chr8:113871970..113871981,- | |||
|description=CAGE_peak_6_at_Fa2h_5end | |||
|id=chr8:113871970..113871981,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.50e-18,3;CL:0002614,7.76e-09,3;CL:0000117,8.25e-09,23;CL:0000337,8.25e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.23e-09!102;UBERON:0000924!1.23e-09!102;UBERON:0006601!1.23e-09!102;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0003076!1.77e-08!12;UBERON:0003057!1.77e-08!12;UBERON:0000073!1.87e-08!75;UBERON:0001016!1.87e-08!75;UBERON:0002616!2.37e-08!49;UBERON:0000955!4.32e-08!50;UBERON:0006238!4.32e-08!50;UBERON:0001017!4.60e-08!73;UBERON:0005743!4.60e-08!73;UBERON:0000033!6.00e-08!63;UBERON:0002298!6.94e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.50e-18,3;UBERON:0002275,3.50e-18,3;UBERON:0002038,7.76e-09,3;UBERON:0009663,7.76e-09,3;UBERON:0009661,7.76e-09,3;UBERON:0000125,7.76e-09,3;UBERON:0002308,7.76e-09,3;UBERON:0001044,1.38e-07,1;UBERON:0001736,1.38e-07,1;UBERON:0003293,1.38e-07,1;UBERON:0003294,1.38e-07,1;UBERON:0001829,1.38e-07,1;UBERON:0010047,1.38e-07,1;UBERON:0000167,1.38e-07,1;UBERON:0006298,1.38e-07,1;UBERON:0001153,1.59e-07,1;UBERON:0001045,1.59e-07,1;UBERON:0002420,4.03e-07,8;UBERON:0007245,4.03e-07,8;UBERON:0010009,4.03e-07,8;UBERON:0010011,4.03e-07,8;UBERON:0000454,4.03e-07,8;UBERON:0002950,7.79e-07,4;UBERON:0001891,7.79e-07,4;UBERON:0009616,7.79e-07,4;UBERON:0010286,7.79e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.856952953211411,1.32521124570968,0,0,0,1.10115880999389,2.93680877595932,1.99688493233117,0,0,0,2.51264699101243,0,1.83357897332172,0,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,1.37250180845588,0.125654352112864,0.347648640384553,0,0.41557608911912,0.811206315338788,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0,0.422190474497091,0,0.820704498725306,0,3.52308073819968,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.247960367176008,0.26175594198403,1.68499465279331,4.34937519160848,5.07323644815771,0,0,0,0,0,0,0,0,0.483168241652012,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p6@Fa2h | |||
}} |
Latest revision as of 12:46, 1 October 2015
Short description: | p6@Fa2h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fa2h_5end |
Coexpression cluster: | MCL_coexpression_mm9:2475 |
Association with transcript: | -13bp_to_ENSMUST00000162216_5end |
EntrezGene: | Fa2h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.50e-18 | 3 |
neuron of the substantia nigra | 7.76e-09 | 3 |
CNS neuron (sensu Vertebrata) | 8.25e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.50e-18 | 3 |
reticular formation | 3.50e-18 | 3 |
substantia nigra | 7.76e-09 | 3 |
telencephalic nucleus | 7.76e-09 | 3 |
midbrain nucleus | 7.76e-09 | 3 |
neural nucleus | 7.76e-09 | 3 |
nucleus of brain | 7.76e-09 | 3 |
saliva-secreting gland | 1.38e-07 | 1 |
submandibular gland | 1.38e-07 | 1 |
gland of oral region | 1.38e-07 | 1 |
gland of foregut | 1.38e-07 | 1 |
major salivary gland | 1.38e-07 | 1 |
oral gland | 1.38e-07 | 1 |
oral cavity | 1.38e-07 | 1 |
submandibular gland primordium | 1.38e-07 | 1 |
caecum | 1.59e-07 | 1 |
midgut | 1.59e-07 | 1 |
basal ganglion | 4.03e-07 | 8 |
nuclear complex of neuraxis | 4.03e-07 | 8 |
aggregate regional part of brain | 4.03e-07 | 8 |
collection of basal ganglia | 4.03e-07 | 8 |
cerebral subcortex | 4.03e-07 | 8 |
regional part of midbrain | 7.79e-07 | 4 |
midbrain | 7.79e-07 | 4 |
presumptive midbrain | 7.79e-07 | 4 |
midbrain neural tube | 7.79e-07 | 4 |