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FFCP PHASE1:Mm9::chr11:41995741..41995783,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14394
|EntrezGene=14394
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q2L8
|UniProt=E9Q2L8
|association_with_transcript=-76bp_to_ENSMUST00000153147_5end
|association_with_transcript=-76bp_to_ENSMUST00000153147_5end
|cluster_id=chr11:41995741..41995783,-
|description=CAGE_peak_1_at_Gabra1_5end
|description=CAGE_peak_1_at_Gabra1_5end
|id=chr11:41995741..41995783,-
|id=chr11:41995741..41995783,-
|ontology_enrichment_celltype=CL:0000117!1.12e-09!23;CL:0000337!1.12e-09!23
|ontology_enrichment_celltype=CL:0000117!1.12e-09!23;CL:0000337!1.12e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-11,23;CL:0000337,2.96e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.62e-19!63;UBERON:0002346!7.87e-19!71;UBERON:0003075!7.87e-19!71;UBERON:0007284!7.87e-19!71;UBERON:0001049!3.97e-18!52;UBERON:0005068!3.97e-18!52;UBERON:0006241!3.97e-18!52;UBERON:0007135!3.97e-18!52;UBERON:0000955!1.61e-17!50;UBERON:0006238!1.61e-17!50;UBERON:0002616!6.72e-17!49;UBERON:0003056!1.06e-15!49;UBERON:0001017!4.28e-15!73;UBERON:0005743!4.28e-15!73;UBERON:0000073!5.64e-15!75;UBERON:0001016!5.64e-15!75;UBERON:0004121!1.32e-14!102;UBERON:0000924!1.32e-14!102;UBERON:0006601!1.32e-14!102;UBERON:0002020!4.13e-14!34;UBERON:0003080!8.45e-14!40;UBERON:0002780!4.46e-13!39;UBERON:0001890!4.46e-13!39;UBERON:0006240!4.46e-13!39;UBERON:0002791!1.63e-11!29;UBERON:0003528!1.63e-11!29;UBERON:0001893!1.63e-11!29;UBERON:0002021!1.42e-08!10;UBERON:0000411!1.42e-08!10;UBERON:0001950!1.42e-08!10;UBERON:0007811!4.64e-08!86;UBERON:0002619!7.23e-08!17;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21
|ontology_enrichment_uberon=UBERON:0000033!2.62e-19!63;UBERON:0002346!7.87e-19!71;UBERON:0003075!7.87e-19!71;UBERON:0007284!7.87e-19!71;UBERON:0001049!3.97e-18!52;UBERON:0005068!3.97e-18!52;UBERON:0006241!3.97e-18!52;UBERON:0007135!3.97e-18!52;UBERON:0000955!1.61e-17!50;UBERON:0006238!1.61e-17!50;UBERON:0002616!6.72e-17!49;UBERON:0003056!1.06e-15!49;UBERON:0001017!4.28e-15!73;UBERON:0005743!4.28e-15!73;UBERON:0000073!5.64e-15!75;UBERON:0001016!5.64e-15!75;UBERON:0004121!1.32e-14!102;UBERON:0000924!1.32e-14!102;UBERON:0006601!1.32e-14!102;UBERON:0002020!4.13e-14!34;UBERON:0003080!8.45e-14!40;UBERON:0002780!4.46e-13!39;UBERON:0001890!4.46e-13!39;UBERON:0006240!4.46e-13!39;UBERON:0002791!1.63e-11!29;UBERON:0003528!1.63e-11!29;UBERON:0001893!1.63e-11!29;UBERON:0002021!1.42e-08!10;UBERON:0000411!1.42e-08!10;UBERON:0001950!1.42e-08!10;UBERON:0007811!4.64e-08!86;UBERON:0002619!7.23e-08!17;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-24,54;UBERON:0001049,7.39e-22,52;UBERON:0005068,7.39e-22,52;UBERON:0006241,7.39e-22,52;UBERON:0007135,7.39e-22,52;UBERON:0001017,5.83e-20,73;UBERON:0001016,5.14e-19,75;UBERON:0002020,1.05e-18,34;UBERON:0002346,1.19e-18,64;UBERON:0003075,1.19e-18,64;UBERON:0007284,1.19e-18,64;UBERON:0000955,5.21e-18,47;UBERON:0006238,5.21e-18,47;UBERON:0002616,3.67e-17,46;UBERON:0010371,1.15e-15,73;UBERON:0004121,2.54e-15,95;UBERON:0000924,2.54e-15,95;UBERON:0006601,2.54e-15,95;UBERON:0003528,7.75e-15,29;UBERON:0002791,7.75e-15,29;UBERON:0001893,7.75e-15,29;UBERON:0003080,8.43e-15,40;UBERON:0002780,8.08e-14,39;UBERON:0001890,8.08e-14,39;UBERON:0006240,8.08e-14,39;UBERON:0003056,1.83e-13,49;UBERON:0002021,3.04e-12,10;UBERON:0000411,3.04e-12,10;UBERON:0001950,3.04e-12,10;UBERON:0010314,3.11e-12,92;UBERON:0002619,5.92e-10,17;UBERON:0000956,1.00e-08,21;UBERON:0001869,1.00e-08,21;UBERON:0000203,1.00e-08,21;UBERON:0003076,6.13e-08,12;UBERON:0003057,6.13e-08,12;UBERON:0002420,6.40e-08,8;UBERON:0007245,6.40e-08,8;UBERON:0010009,6.40e-08,8;UBERON:0010011,6.40e-08,8;UBERON:0000454,6.40e-08,8
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,22.2813420195803,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.99911378165325,6.62605622854841,0.734944795289724,0.766763768145891,1.83843757322004,127.734421959291,109.428048739006,118.123424074051,1.84640802822271,2.10421580285542,2.08365348222704,67.0039197603314,68.6570384238649,69.0648079951182,7.07108605136802,7.68807076315156,1.4911955666024,0.151452386666368,0.377857800533928,0.289864488701678,0,0,1.07940638327563,0,0,4.21333260395256,0,0,0,2.81686839553361,0,0,0,0,0,0,3.08296475241462,0,0,1.04091196059682,1.21786191324856,0.922461989024234,1.20578112442098,1.41106448562846,0.251333182659351,0,0,0,0,0,0.484875253135222,0,151.074891257958,122.735770192685,0.255457055208591,0,0,0,173.757141709594,93.7876235778184,6.03140890141749,139.75475343459,104.331906590775,124.257250646617,94.2621738423672,1.2220723662038,0,0,3.36706969418358,0.780722657776222,0.459804208866946,0.360124259610698,0.452114453507145,0.612328492361951,1.2811372028485,0.937017245597288,8.79591460512653,0,0.189106080167819,0.351902248327898,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.462801338662135,0.232533944750408,0,0.467061369468678,0,0,0,0,0,0,93.3687371624725,3.2929475961371,0,0,1.2797295032114,1.62565670302307,1.03093969057675,0.201683524623343,1.11189021922435,0.190225626112559,0,0.988193728344065,1.00534083520108,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,60.3670218354098,57.4337264301796,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,58.1591582723471,0,0.534196811001766,1.30309567482861,0.164970122972535,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,0.516856586336442,0,0,0,0,0,3.74483566329167,0.36012218806262,0,0.428674070063185,1.24138163549592,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0.661585194164886,0,0,0.180938774784468,0,0,0.291480836629851,27.2575193955449,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0,1.89801596148681,1.42323626988794,0.540026704109006,0.836353184057875,0.87345025498471,0.404593039154462,1.07449492442937,0.785267825952089,0.259229946583586,0,0,0.747582730219894,0.496375471371293,3.69457257853691,1.6790777052105,3.21016638432478,2.11243029562357,0.651021924219751,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,111.256112995562,98.5096006125358,96.819341771258,93.8318375596534,130.850761276193,147.301809990992,110.703690038016,148.155675860769,125.520447288625,169.825382254597,0.103787347584177,1.99512436700516,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.40462261204824,1.53660365771686,1.49332219284595,1.90517476513229,0.927074607558844,0.964546102318525,0.824171801606613,1.03039244094078,1.37147700954166,1.59728225543404,0.715308569841963,1.74415699958794,1.78807822789128,1.35383372626682,2.19513567447327,3.15683653725411,0.543216455383447,3.36685362994643,1.30498519936592,1.18205378850676,0.818462086339379,1.39443157067369,0.771626443924566,1.74867404556562,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,22.2813420195803,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.99911378165325,6.62605622854841,0.734944795289724,0.766763768145891,1.83843757322004,127.734421959291,109.428048739006,118.123424074051,1.84640802822271,2.10421580285542,2.08365348222704,67.0039197603314,68.6570384238649,69.0648079951182,7.07108605136802,7.68807076315156,1.4911955666024,0.151452386666368,0.377857800533928,0.289864488701678,0,0,1.07940638327563,0,0,4.21333260395256,0,0,0,2.81686839553361,0,0,0,0,0,0,3.08296475241462,0,0,1.04091196059682,1.21786191324856,0.922461989024234,1.20578112442098,1.41106448562846,0.251333182659351,0,0,0,0,0,0.484875253135222,0,151.074891257958,122.735770192685,0.255457055208591,0,0,0,173.757141709594,93.7876235778184,6.03140890141749,139.75475343459,104.331906590775,124.257250646617,94.2621738423672,1.2220723662038,0,0,3.36706969418358,0.780722657776222,0.459804208866946,0.360124259610698,0.452114453507145,0.612328492361951,1.2811372028485,0.937017245597288,8.79591460512653,0,0.189106080167819,0.351902248327898,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.462801338662135,0.232533944750408,0,0.467061369468678,0,0,0,0,0,0,93.3687371624725,3.2929475961371,0,0,1.2797295032114,1.62565670302307,1.03093969057675,0.201683524623343,1.11189021922435,0.190225626112559,0,0.988193728344065,1.00534083520108,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,60.3670218354098,57.4337264301796,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,58.1591582723471,0,0.534196811001766,1.30309567482861,0.164970122972535,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,0.516856586336442,0,0,0,0,0,3.74483566329167,0.36012218806262,0,0.428674070063185,1.24138163549592,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0.661585194164886,0,0,0.180938774784468,0,0,0.291480836629851,27.2575193955449,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0,1.89801596148681,1.42323626988794,0.540026704109006,0.836353184057875,0.87345025498471,0.404593039154462,1.07449492442937,0.785267825952089,0.259229946583586,0,0,0.747582730219894,0.496375471371293,3.69457257853691,1.6790777052105,3.21016638432478,2.11243029562357,0.651021924219751,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,111.256112995562,98.5096006125358,96.819341771258,93.8318375596534,130.850761276193,147.301809990992,110.703690038016,148.155675860769,125.520447288625,169.825382254597,0.103787347584177,1.99512436700516,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.40462261204824,1.53660365771686,1.49332219284595,1.90517476513229,0.927074607558844,0.964546102318525,0.824171801606613,1.03039244094078,1.37147700954166,1.59728225543404,0.715308569841963,1.74415699958794,1.78807822789128,1.35383372626682,2.19513567447327,3.15683653725411,0.543216455383447,3.36685362994643,1.30498519936592,1.18205378850676,0.818462086339379,1.39443157067369,0.771626443924566,1.74867404556562,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p1@Gabra1
|short_description=p1@Gabra1
}}
}}

Latest revision as of 12:25, 1 October 2015

Short description:p1@Gabra1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabra1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -76bp_to_ENSMUST00000153147_5end
EntrezGene:Gabra1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabra1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3127.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3109.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7118.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E467.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E568.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I669.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2151.07
cerebellum, neonate N30.CNhs11135.1395-42I2122.74
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4173.76
corpus striatum, adult.CNhs10487.19-21D893.79
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D5139.75
cortex, neonate N30.CNhs11107.1392-42F2104.33
diencephalon, adult.CNhs10482.20-12F2124.26
diencephalon, neonate N30.CNhs11201.1388-42B294.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E893.37
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C260.37
medulla oblongata, neonate N30.CNhs11200.1396-42A357.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I958.16
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C927.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1111.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A396.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D793.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4130.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5147.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6110.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7148.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8125.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9169.83
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.96e-1123
neuroblast (sensu Vertebrata)2.96e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.93e-2454
neural tube7.39e-2252
neural rod7.39e-2252
future spinal cord7.39e-2252
neural keel7.39e-2252
central nervous system5.83e-2073
nervous system5.14e-1975
gray matter1.05e-1834
neurectoderm1.19e-1864
neural plate1.19e-1864
presumptive neural plate1.19e-1864
brain5.21e-1847
future brain5.21e-1847
regional part of brain3.67e-1746
ecto-epithelium1.15e-1573
ectoderm-derived structure2.54e-1595
ectoderm2.54e-1595
presumptive ectoderm2.54e-1595
brain grey matter7.75e-1529
regional part of telencephalon7.75e-1529
telencephalon7.75e-1529
anterior neural tube8.43e-1540
regional part of forebrain8.08e-1439
forebrain8.08e-1439
future forebrain8.08e-1439
pre-chordal neural plate1.83e-1349
occipital lobe3.04e-1210
visual cortex3.04e-1210
neocortex3.04e-1210
structure with developmental contribution from neural crest3.11e-1292
regional part of cerebral cortex5.92e-1017
cerebral cortex1.00e-0821
cerebral hemisphere1.00e-0821
pallium1.00e-0821
posterior neural tube6.13e-0812
chordal neural plate6.13e-0812
basal ganglion6.40e-088
nuclear complex of neuraxis6.40e-088
aggregate regional part of brain6.40e-088
collection of basal ganglia6.40e-088
cerebral subcortex6.40e-088
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