FFCP PHASE1:Mm9::chr18:56892835..56892840,+: Difference between revisions
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{{FFCP|EntrezGene=16906|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-56bp_to_uc008eyu.1_5end|description=CAGE_peak_13_at_Lmnb1_5end|id=chr18:56892835..56892840,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.10e-11,9|ontology_enrichment_disease=DOID:0060100!2.15e-08!3;DOID:4045!2.15e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.69e-33,3;DOID:4045,1.69e-33,3;DOID:0050686,3.63e-17,6|ontology_enrichment_uberon=UBERON:0007823!3.02e-07!5;UBERON:0002465!5.17e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.666219523631325,0,0,0,0,0.42438965179803,0,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,12.5013655123808,8.89990364755457,22.3527965451785,19.1252735788365,7.76816564849846,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0.228778173206523,1.01987057996313,1.11961161858926,0.967399816630967,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.194915761479505,0.192423683280659,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p13@Lmnb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16906 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_uc008eyu.1_5end | |||
|cluster_id=chr18:56892835..56892840,+ | |||
|description=CAGE_peak_13_at_Lmnb1_5end | |||
|id=chr18:56892835..56892840,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.10e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.15e-08!3;DOID:4045!2.15e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.69e-33,3;DOID:4045,1.69e-33,3;DOID:0050686,3.63e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0007823!3.02e-07!5;UBERON:0002465!5.17e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.666219523631325,0,0,0,0,0.42438965179803,0,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,12.5013655123808,8.89990364755457,22.3527965451785,19.1252735788365,7.76816564849846,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0.228778173206523,1.01987057996313,1.11961161858926,0.967399816630967,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.194915761479505,0.192423683280659,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p13@Lmnb1 | |||
}} |
Latest revision as of 12:13, 1 October 2015
Short description: | p13@Lmnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Lmnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -56bp_to_uc008eyu.1_5end |
EntrezGene: | Lmnb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.10e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.10e-11 | 9 |
striated muscle tissue | 1.10e-11 | 9 |
muscle tissue | 1.10e-11 | 9 |
multilaminar epithelium | 1.10e-11 | 9 |
epithelial vesicle | 1.10e-11 | 9 |
musculature | 1.10e-11 | 9 |
somite | 1.10e-11 | 9 |
myotome | 1.10e-11 | 9 |
presomitic mesoderm | 1.10e-11 | 9 |
presumptive segmental plate | 1.10e-11 | 9 |
dermomyotome | 1.10e-11 | 9 |
trunk paraxial mesoderm | 1.10e-11 | 9 |
musculature of body | 1.39e-10 | 10 |
dense mesenchyme tissue | 1.11e-09 | 11 |
paraxial mesoderm | 1.11e-09 | 11 |
presumptive paraxial mesoderm | 1.11e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.69e-33 | 3 |
muscle cancer | 1.69e-33 | 3 |
organ system cancer | 3.63e-17 | 6 |