FFCP PHASE1:Mm9::chr5:102498924..102498959,-: Difference between revisions
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{{FFCP|EntrezGene=72145|HGNC=|MCL_coexpression_id=1|UniProt=E9QL77,Q6VNB8|association_with_transcript=0bp_to_ENSMUST00000043529,ENSMUST00000053177,ENSMUST00000174698,NM_172882,uc008yis.2,uc008yit.1_5end|description=CAGE_peak_1_at_Wdfy3_5end|id=chr5:102498924..102498959,-|ontology_enrichment_celltype=CL:0000117!1.84e-11!23;CL:0000337!1.84e-11!23;CL:0000540!1.32e-10!33;CL:0000047!1.32e-10!33;CL:0000031!1.32e-10!33;CL:0000404!1.32e-10!33;CL:0000393!3.36e-09!39;CL:0000211!3.36e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-11,23;CL:0000337,1.84e-11,23;CL:0000540,1.32e-10,33;CL:0000047,1.32e-10,33;CL:0000031,1.32e-10,33;CL:0000404,1.32e-10,33;CL:0000393,3.36e-09,39;CL:0000211,3.36e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.35e-18!73;UBERON:0005743!3.35e-18!73;UBERON:0000033!8.98e-18!63;UBERON:0004121!1.76e-17!102;UBERON:0000924!1.76e-17!102;UBERON:0006601!1.76e-17!102;UBERON:0000073!5.88e-17!75;UBERON:0001016!5.88e-17!75;UBERON:0001049!4.21e-16!52;UBERON:0005068!4.21e-16!52;UBERON:0006241!4.21e-16!52;UBERON:0007135!4.21e-16!52;UBERON:0000955!1.18e-15!50;UBERON:0006238!1.18e-15!50;UBERON:0002346!2.18e-15!71;UBERON:0003075!2.18e-15!71;UBERON:0007284!2.18e-15!71;UBERON:0002616!5.23e-15!49;UBERON:0003056!1.01e-13!49;UBERON:0002020!2.46e-13!34;UBERON:0004111!8.71e-13!122;UBERON:0003080!3.91e-12!40;UBERON:0000025!1.35e-11!114;UBERON:0002780!1.51e-11!39;UBERON:0001890!1.51e-11!39;UBERON:0006240!1.51e-11!39;UBERON:0002791!7.63e-11!29;UBERON:0003528!7.63e-11!29;UBERON:0001893!7.63e-11!29;UBERON:0000468!5.83e-08!333;UBERON:0000956!2.41e-07!21;UBERON:0001869!2.41e-07!21;UBERON:0000203!2.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.34e-19,95;UBERON:0000924,7.34e-19,95;UBERON:0006601,7.34e-19,95;UBERON:0001017,3.35e-18,73;UBERON:0000073,1.32e-17,54;UBERON:0002346,3.07e-17,64;UBERON:0003075,3.07e-17,64;UBERON:0007284,3.07e-17,64;UBERON:0010371,3.36e-17,73;UBERON:0001016,5.88e-17,75;UBERON:0001049,4.21e-16,52;UBERON:0005068,4.21e-16,52;UBERON:0006241,4.21e-16,52;UBERON:0007135,4.21e-16,52;UBERON:0010314,1.55e-14,92;UBERON:0000955,9.89e-14,47;UBERON:0006238,9.89e-14,47;UBERON:0003056,1.01e-13,49;UBERON:0002020,2.46e-13,34;UBERON:0002616,4.14e-13,46;UBERON:0004111,8.71e-13,122;UBERON:0003080,3.90e-12,40;UBERON:0000025,1.35e-11,114;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0003528,7.63e-11,29;UBERON:0002791,7.63e-11,29;UBERON:0001893,7.63e-11,29;UBERON:0000956,2.41e-07,21;UBERON:0001869,2.41e-07,21;UBERON:0000203,2.41e-07,21|phase1_expression=31.7094717267492,9.07336059862339,12.739978702907,15.4256747766483,11.520601788766,12.4230661214798,6.77476657727024,0,0,0,0,0,0,0,16.6554880907831,15.5905955890166,11.1929900500503,3.47008381894061,3.70208970735495,4.66828616977833,28.2343723301552,2.78014663362479,0.783599367416806,4.31979541542198,5.04700418347774,5.7423196411502,5.59990595006797,7.32602191132023,5.89072600314759,6.30075324399827,4.8780712344167,10.7955214488137,11.0711661765223,0,10.1098066912946,11.802659820453,12.4543307320045,45.6199477503229,23.440060335714,26.6997109426637,43.5291301142951,49.1792749170081,35.9277661243054,20.0175940581168,19.1602400004883,13.5824596599644,13.3006528539167,10.0291571935005,8.5677611266444,11.665793944457,6.15940255151595,10.062679505548,0,0,0,15.4355661621568,24.3553423947943,26.814948798427,39.4517098676216,33.8554226734101,30.4239073682966,12.876092218627,10.6715375533337,39.1456377017409,24.7216590641744,29.8401648277362,20.0732074047331,25.7426264565442,36.2913643079672,35.3715558429029,27.7628948983824,38.5628828945135,39.5354688303388,26.9479758272899,30.2871688417627,29.4150011715207,58.361416929676,56.0547414193974,57.7560565043475,39.5658863190582,40.1630755414578,44.2776364973246,52.765586811261,38.8306200921859,58.6745271462951,46.8459450903132,40.148813985347,36.1614924901083,11.4346551933108,11.5624486963382,55.0742528533188,21.5105969245347,5.439770669662,11.3337670243942,12.3457519315057,12.0967259516281,8.98844288843212,8.52151612890289,4.93593408745451,3.88673531961374,27.4644668564527,15.3991772897181,30.5766287647975,7.11066703153331,7.14420435337007,7.34743609877786,6.57181778519218,15.4148237620731,16.572024553419,28.5008907004464,18.0424739836781,14.9188084372949,11.992005857315,15.8258772580254,26.692636519805,14.9543243682314,23.4835219347655,22.7020990364261,9.73071607144862,19.4120219936891,15.0172232553068,14.0613823409214,11.1835056730873,72.0240760648406,65.347372525798,13.7946809812639,7.30872259486114,2.99951365496704,5.20987930999565,52.1271425128783,51.2400675156862,21.2355855070741,52.6687690182598,45.2616359474685,51.7392230953305,43.3184172390913,22.6083387747702,20.2783362094452,21.734157225296,33.0393713741764,23.4216797332867,20.921091503446,23.9482632641114,24.4141804893858,36.4675635451117,28.185018462667,30.1719553082327,46.5666067330228,19.8322553498215,24.7728965019843,28.1521798662318,15.56289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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72145 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9QL77,Q6VNB8 | |||
|association_with_transcript=0bp_to_ENSMUST00000043529,ENSMUST00000053177,ENSMUST00000174698,NM_172882,uc008yis.2,uc008yit.1_5end | |||
|cluster_id=chr5:102498924..102498959,- | |||
|description=CAGE_peak_1_at_Wdfy3_5end | |||
|id=chr5:102498924..102498959,- | |||
|ontology_enrichment_celltype=CL:0000117!1.84e-11!23;CL:0000337!1.84e-11!23;CL:0000540!1.32e-10!33;CL:0000047!1.32e-10!33;CL:0000031!1.32e-10!33;CL:0000404!1.32e-10!33;CL:0000393!3.36e-09!39;CL:0000211!3.36e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-11,23;CL:0000337,1.84e-11,23;CL:0000540,1.32e-10,33;CL:0000047,1.32e-10,33;CL:0000031,1.32e-10,33;CL:0000404,1.32e-10,33;CL:0000393,3.36e-09,39;CL:0000211,3.36e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.35e-18!73;UBERON:0005743!3.35e-18!73;UBERON:0000033!8.98e-18!63;UBERON:0004121!1.76e-17!102;UBERON:0000924!1.76e-17!102;UBERON:0006601!1.76e-17!102;UBERON:0000073!5.88e-17!75;UBERON:0001016!5.88e-17!75;UBERON:0001049!4.21e-16!52;UBERON:0005068!4.21e-16!52;UBERON:0006241!4.21e-16!52;UBERON:0007135!4.21e-16!52;UBERON:0000955!1.18e-15!50;UBERON:0006238!1.18e-15!50;UBERON:0002346!2.18e-15!71;UBERON:0003075!2.18e-15!71;UBERON:0007284!2.18e-15!71;UBERON:0002616!5.23e-15!49;UBERON:0003056!1.01e-13!49;UBERON:0002020!2.46e-13!34;UBERON:0004111!8.71e-13!122;UBERON:0003080!3.91e-12!40;UBERON:0000025!1.35e-11!114;UBERON:0002780!1.51e-11!39;UBERON:0001890!1.51e-11!39;UBERON:0006240!1.51e-11!39;UBERON:0002791!7.63e-11!29;UBERON:0003528!7.63e-11!29;UBERON:0001893!7.63e-11!29;UBERON:0000468!5.83e-08!333;UBERON:0000956!2.41e-07!21;UBERON:0001869!2.41e-07!21;UBERON:0000203!2.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.34e-19,95;UBERON:0000924,7.34e-19,95;UBERON:0006601,7.34e-19,95;UBERON:0001017,3.35e-18,73;UBERON:0000073,1.32e-17,54;UBERON:0002346,3.07e-17,64;UBERON:0003075,3.07e-17,64;UBERON:0007284,3.07e-17,64;UBERON:0010371,3.36e-17,73;UBERON:0001016,5.88e-17,75;UBERON:0001049,4.21e-16,52;UBERON:0005068,4.21e-16,52;UBERON:0006241,4.21e-16,52;UBERON:0007135,4.21e-16,52;UBERON:0010314,1.55e-14,92;UBERON:0000955,9.89e-14,47;UBERON:0006238,9.89e-14,47;UBERON:0003056,1.01e-13,49;UBERON:0002020,2.46e-13,34;UBERON:0002616,4.14e-13,46;UBERON:0004111,8.71e-13,122;UBERON:0003080,3.90e-12,40;UBERON:0000025,1.35e-11,114;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0003528,7.63e-11,29;UBERON:0002791,7.63e-11,29;UBERON:0001893,7.63e-11,29;UBERON:0000956,2.41e-07,21;UBERON:0001869,2.41e-07,21;UBERON:0000203,2.41e-07,21 | |||
|phase1_expression=31.7094717267492,9.07336059862339,12.739978702907,15.4256747766483,11.520601788766,12.4230661214798,6.77476657727024,0,0,0,0,0,0,0,16.6554880907831,15.5905955890166,11.1929900500503,3.47008381894061,3.70208970735495,4.66828616977833,28.2343723301552,2.78014663362479,0.783599367416806,4.31979541542198,5.04700418347774,5.7423196411502,5.59990595006797,7.32602191132023,5.89072600314759,6.30075324399827,4.8780712344167,10.7955214488137,11.0711661765223,0,10.1098066912946,11.802659820453,12.4543307320045,45.6199477503229,23.440060335714,26.6997109426637,43.5291301142951,49.1792749170081,35.9277661243054,20.0175940581168,19.1602400004883,13.5824596599644,13.3006528539167,10.0291571935005,8.5677611266444,11.665793944457,6.15940255151595,10.062679505548,0,0,0,15.4355661621568,24.3553423947943,26.814948798427,39.4517098676216,33.8554226734101,30.4239073682966,12.876092218627,10.6715375533337,39.1456377017409,24.7216590641744,29.8401648277362,20.0732074047331,25.7426264565442,36.2913643079672,35.3715558429029,27.7628948983824,38.5628828945135,39.5354688303388,26.9479758272899,30.2871688417627,29.4150011715207,58.361416929676,56.0547414193974,57.7560565043475,39.5658863190582,40.1630755414578,44.2776364973246,52.765586811261,38.8306200921859,58.6745271462951,46.8459450903132,40.148813985347,36.1614924901083,11.4346551933108,11.5624486963382,55.0742528533188,21.5105969245347,5.439770669662,11.3337670243942,12.3457519315057,12.0967259516281,8.98844288843212,8.52151612890289,4.93593408745451,3.88673531961374,27.4644668564527,15.3991772897181,30.5766287647975,7.11066703153331,7.14420435337007,7.34743609877786,6.57181778519218,15.4148237620731,16.572024553419,28.5008907004464,18.0424739836781,14.9188084372949,11.992005857315,15.8258772580254,26.692636519805,14.9543243682314,23.4835219347655,22.7020990364261,9.73071607144862,19.4120219936891,15.0172232553068,14.0613823409214,11.1835056730873,72.0240760648406,65.347372525798,13.7946809812639,7.30872259486114,2.99951365496704,5.20987930999565,52.1271425128783,51.2400675156862,21.2355855070741,52.6687690182598,45.2616359474685,51.7392230953305,43.3184172390913,22.6083387747702,20.2783362094452,21.734157225296,33.0393713741764,23.4216797332867,20.921091503446,23.9482632641114,24.4141804893858,36.4675635451117,28.185018462667,30.1719553082327,46.5666067330228,19.8322553498215,24.7728965019843,28.1521798662318,15.5628970023578,30.5851974148158,25.4224081561182,30.2499740519677,21.2966665495788,2.1066395619397,2.05878325691772,6.81992398549422,19.8840741634082,18.9966108584688,16.0255234700303,21.7805156738393,18.495837784256,20.2089917882465,22.5557926407896,24.681152928765,16.8142093008724,19.0889425899637,21.1776028662033,25.860950245128,24.8539978623065,18.0031094538662,23.4861232830651,47.3152384269286,27.9900545671654,12.8863325363681,10.3135720998782,18.5560777965654,27.1716906076713,24.2270827285535,17.3447831176075,16.4559752445204,13.1255682017666,9.01605216934572,13.0112174231969,16.5881237808178,16.1154742353332,14.2323783596958,16.178749355776,11.0230405436094,13.541606581297,16.311439481965,23.9921876480431,25.9227792048085,27.6965805869627,27.9291581521381,28.405007055579,31.5550320250044,28.193538264104,18.839847340965,19.9903405553317,12.7474629647474,15.3497497258807,14.9384836286034,13.4917267430912,18.8659912891308,18.0882869814313,11.4581633301639,17.2617682470486,26.1037715107807,9.06052663520669,47.443508154027,31.6319805518228,19.6583734062173,14.9021537988796,12.9166137735777,24.1221760681684,26.0501998134913,20.6545638829828,20.3706220552532,19.860175035697,22.0608833391192,31.1561638841777,29.7554551107517,32.3921855443946,31.8422991094506,34.3270268955601,30.1369512762651,33.2642528872948,24.6939524068231,34.8604231181443,39.2057338242108,30.4587182938477,9.83528546038072,11.8652800911035,44.4725134266184,45.3609227111826,7.70494243270374,20.7026160307586,14.1978698737316,23.0358859135017,24.3428439438063,20.790285421872,22.057068734157,31.4214949175604,27.9319384155677,19.2888866221466,28.4607200121497,56.552551690238,23.7039942297809,22.2582004584069,23.7814960656221,36.2934270539578,23.8941249011933,12.624593080059,9.67435382287203,10.1846743068185,12.1073776081117,13.2197113615889,20.4158351602895,18.1766864738753,18.8943610543902,17.0659849285341,9.48767477174989,22.6898195146011,28.2564872775644,22.5076367539138,19.9212373025442,22.5053886783172,23.9409315417069,25.6851097346982,27.9733335023606,22.2259412853657,19.9470951854154,43.637406597947,26.6839361646504,35.7803168883012,35.6836382997951,25.6329930944662,21.845138952574,21.1741760671129,13.9910801582328,38.3830375161755,13.1570578214347,20.2259130603958,19.6306199011894,15.25784501738,12.9859516334974,14.870581258424,11.0485979496006,9.23679585336143,10.7795979567451,0.954670618015114,18.0311516341247,26.2282112593635,19.1169453254588,20.6997413054324,20.0893558646483,17.6672293764115,21.8205123114887,17.275892170946,15.5537967950151,14.2908042009993,2.81846469342095,22.1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| |||
|short_description=p1@Wdfy3 | |||
}} |
Latest revision as of 12:05, 1 October 2015
Short description: | p1@Wdfy3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wdfy3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000043529, ENSMUST00000053177, ENSMUST00000174698, NM_172882, uc008yis.2, uc008yit.1_5end |
EntrezGene: | Wdfy3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-11 | 23 |
neuron | 1.32e-10 | 33 |
neuronal stem cell | 1.32e-10 | 33 |
neuroblast | 1.32e-10 | 33 |
electrically signaling cell | 1.32e-10 | 33 |
electrically responsive cell | 3.36e-09 | 39 |
electrically active cell | 3.36e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.34e-19 | 95 |
ectoderm | 7.34e-19 | 95 |
presumptive ectoderm | 7.34e-19 | 95 |
central nervous system | 3.35e-18 | 73 |
regional part of nervous system | 1.32e-17 | 54 |
neurectoderm | 3.07e-17 | 64 |
neural plate | 3.07e-17 | 64 |
presumptive neural plate | 3.07e-17 | 64 |
ecto-epithelium | 3.36e-17 | 73 |
nervous system | 5.88e-17 | 75 |
neural tube | 4.21e-16 | 52 |
neural rod | 4.21e-16 | 52 |
future spinal cord | 4.21e-16 | 52 |
neural keel | 4.21e-16 | 52 |
structure with developmental contribution from neural crest | 1.55e-14 | 92 |
brain | 9.89e-14 | 47 |
future brain | 9.89e-14 | 47 |
pre-chordal neural plate | 1.01e-13 | 49 |
gray matter | 2.46e-13 | 34 |
regional part of brain | 4.14e-13 | 46 |
anatomical conduit | 8.71e-13 | 122 |
anterior neural tube | 3.90e-12 | 40 |
tube | 1.35e-11 | 114 |
regional part of forebrain | 1.51e-11 | 39 |
forebrain | 1.51e-11 | 39 |
future forebrain | 1.51e-11 | 39 |
brain grey matter | 7.63e-11 | 29 |
regional part of telencephalon | 7.63e-11 | 29 |
telencephalon | 7.63e-11 | 29 |
cerebral cortex | 2.41e-07 | 21 |
cerebral hemisphere | 2.41e-07 | 21 |
pallium | 2.41e-07 | 21 |