FFCP PHASE1:Mm9::chr3:116265969..116265981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109245 | |EntrezGene=109245 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGI7 | |UniProt=Q8BGI7 | ||
|association_with_transcript=73bp_to_ENSMUST00000029573_5end | |association_with_transcript=73bp_to_ENSMUST00000029573_5end | ||
|cluster_id=chr3:116265969..116265981,+ | |||
|description=CAGE_peak_4_at_Lrrc39_5end | |description=CAGE_peak_4_at_Lrrc39_5end | ||
|id=chr3:116265969..116265981,+ | |id=chr3:116265969..116265981,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.10e-18!23;UBERON:0001009!3.10e-18!23;UBERON:0007100!2.29e-17!18;UBERON:0000948!2.29e-17!18;UBERON:0005498!2.29e-17!18;UBERON:0004140!2.29e-17!18;UBERON:0009881!2.29e-17!18;UBERON:0004141!2.29e-17!18;UBERON:0003084!2.29e-17!18;UBERON:0007005!2.29e-17!18;UBERON:0004139!2.29e-17!18;UBERON:0004291!2.29e-17!18;UBERON:0004872!8.33e-12!33;UBERON:0003103!4.93e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.10e-37,18;UBERON:0000948,1.10e-37,18;UBERON:0005498,1.10e-37,18;UBERON:0004140,1.10e-37,18;UBERON:0009881,1.10e-37,18;UBERON:0004141,1.10e-37,18;UBERON:0003084,1.10e-37,18;UBERON:0007005,1.10e-37,18;UBERON:0004139,1.10e-37,18;UBERON:0004291,1.10e-37,18;UBERON:0004535,6.14e-33,23;UBERON:0001009,6.14e-33,23;UBERON:0004872,6.75e-22,33;UBERON:0003103,6.85e-16,43;UBERON:0003914,2.48e-14,47;UBERON:0003081,3.91e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.230615497256059,0,0.352766121407114,0.502666365318702,0.247194967734374,6.2177723475562,0,0.808834249737046,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,5.59239585845855,5.39409937956521,6.30217215113552,5.68187365404505,5.3126342571799,5.86215028972037,6.27841650826101,4.29237442239391,8.75740067753771,10.3672705445493,14.4467368389604,11.2685645268739,14.7661987299586,12.2948064562988,10.0654814070279,0.210289948564127,0.102904612379284,0,0,0,0,0,0.605050573870028,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.645857706783622,0.784068024066026,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.539457385539283,0.826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,2.0405734525369,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,1.12369808963859,0.832326981263301,0.976402972245426,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.676916863133412,1.46342378298218,1.05227884575137,0.543216455383447,0,1.30498519936592,0.886540341380071,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,1.07435527024149,0.956441660344217,0.220591419119515,2.08681052058379 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.230615497256059,0,0.352766121407114,0.502666365318702,0.247194967734374,6.2177723475562,0,0.808834249737046,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,5.59239585845855,5.39409937956521,6.30217215113552,5.68187365404505,5.3126342571799,5.86215028972037,6.27841650826101,4.29237442239391,8.75740067753771,10.3672705445493,14.4467368389604,11.2685645268739,14.7661987299586,12.2948064562988,10.0654814070279,0.210289948564127,0.102904612379284,0,0,0,0,0,0.605050573870028,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.645857706783622,0.784068024066026,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.539457385539283,0.826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,2.0405734525369,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.666740183404846,0,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,1.12369808963859,0.832326981263301,0.976402972245426,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.676916863133412,1.46342378298218,1.05227884575137,0.543216455383447,0,1.30498519936592,0.886540341380071,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,1.07435527024149,0.956441660344217,0.220591419119515,2.08681052058379 | ||
|short_description=p4@Lrrc39 | |short_description=p4@Lrrc39 | ||
}} | }} |
Latest revision as of 12:00, 1 October 2015
Short description: | p4@Lrrc39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lrrc39_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 73bp_to_ENSMUST00000029573_5end |
EntrezGene: | Lrrc39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.10e-37 | 18 |
heart | 1.10e-37 | 18 |
primitive heart tube | 1.10e-37 | 18 |
primary heart field | 1.10e-37 | 18 |
anterior lateral plate mesoderm | 1.10e-37 | 18 |
heart tube | 1.10e-37 | 18 |
heart primordium | 1.10e-37 | 18 |
cardiac mesoderm | 1.10e-37 | 18 |
cardiogenic plate | 1.10e-37 | 18 |
heart rudiment | 1.10e-37 | 18 |
cardiovascular system | 6.14e-33 | 23 |
circulatory system | 6.14e-33 | 23 |
splanchnic layer of lateral plate mesoderm | 6.75e-22 | 33 |
compound organ | 6.85e-16 | 43 |
epithelial tube | 2.48e-14 | 47 |
lateral plate mesoderm | 3.91e-07 | 87 |