FFCP PHASE1:Mm9::chr8:112229540..112229566,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:112229540..112229566,+
|short_description=p2@Zfp821
|description=CAGE_peak_2_at_Zfp821_5end
|association_with_transcript=91bp_to_ENSMUST00000034163,NM_0011...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75871 | |EntrezGene=75871 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=335 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PD05 | |UniProt=Q6PD05 | ||
|association_with_transcript=91bp_to_ENSMUST00000034163,NM_001167946,NR_030772,NR_030773,uc009njc.2,uc009njd.2,uc009nje.2_5end | |||
|cluster_id=chr8:112229540..112229566,+ | |||
|description=CAGE_peak_2_at_Zfp821_5end | |||
|id=chr8:112229540..112229566,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.53e-13!33;CL:0000047!1.53e-13!33;CL:0000031!1.53e-13!33;CL:0000404!1.53e-13!33;CL:0000117!3.03e-13!23;CL:0000337!3.03e-13!23;CL:0000221!3.65e-11!44;CL:0000133!3.65e-11!44;CL:0002319!7.53e-11!43;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39;CL:0000055!7.23e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-14,23;CL:0000337,1.69e-14,23;CL:0000540,2.09e-14,33;CL:0000047,2.09e-14,33;CL:0000031,2.09e-14,33;CL:0000404,2.09e-14,33;CL:0000221,1.93e-11,44;CL:0000133,1.93e-11,44;CL:0000393,3.35e-11,39;CL:0000211,3.35e-11,39;CL:0002319,4.25e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-19!73;UBERON:0005743!1.78e-19!73;UBERON:0000073!1.37e-18!75;UBERON:0001016!1.37e-18!75;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0001049!2.46e-16!52;UBERON:0005068!2.46e-16!52;UBERON:0006241!2.46e-16!52;UBERON:0007135!2.46e-16!52;UBERON:0002346!2.20e-15!71;UBERON:0003075!2.20e-15!71;UBERON:0007284!2.20e-15!71;UBERON:0000033!2.66e-15!63;UBERON:0000955!3.92e-15!50;UBERON:0006238!3.92e-15!50;UBERON:0002020!4.12e-15!34;UBERON:0003056!5.10e-15!49;UBERON:0002616!7.10e-15!49;UBERON:0002780!1.45e-14!39;UBERON:0001890!1.45e-14!39;UBERON:0006240!1.45e-14!39;UBERON:0003080!2.30e-14!40;UBERON:0002791!2.72e-12!29;UBERON:0003528!2.72e-12!29;UBERON:0001893!2.72e-12!29;UBERON:0000153!6.96e-09!94;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0007811!6.66e-08!86;UBERON:0002619!4.71e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-19,73;UBERON:0001016,7.61e-19,75;UBERON:0004121,9.75e-19,95;UBERON:0000924,9.75e-19,95;UBERON:0006601,9.75e-19,95;UBERON:0002346,3.81e-18,64;UBERON:0003075,3.81e-18,64;UBERON:0007284,3.81e-18,64;UBERON:0000073,7.86e-18,54;UBERON:0010371,1.53e-17,73;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0002020,1.06e-15,34;UBERON:0003056,1.49e-15,49;UBERON:0002780,7.60e-15,39;UBERON:0001890,7.60e-15,39;UBERON:0006240,7.60e-15,39;UBERON:0003080,1.20e-14,40;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002616,3.18e-14,46;UBERON:0003528,1.29e-12,29;UBERON:0002791,1.29e-12,29;UBERON:0001893,1.29e-12,29;UBERON:0010314,9.07e-12,92;UBERON:0000956,1.16e-08,21;UBERON:0001869,1.16e-08,21;UBERON:0000203,1.16e-08,21;UBERON:0002619,6.90e-07,17 | |||
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| ||
|short_description=p2@Zfp821 | |||
}} | }} |
Latest revision as of 11:53, 1 October 2015
Short description: | p2@Zfp821 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp821_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 91bp_to_ENSMUST00000034163, NM_001167946, NR_030772, NR_030773, uc009njc.2, uc009njd.2, uc009nje.2_5end |
EntrezGene: | Zfp821 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.69e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-14 | 23 |
neuron | 2.09e-14 | 33 |
neuronal stem cell | 2.09e-14 | 33 |
neuroblast | 2.09e-14 | 33 |
electrically signaling cell | 2.09e-14 | 33 |
ectodermal cell | 1.93e-11 | 44 |
neurectodermal cell | 1.93e-11 | 44 |
electrically responsive cell | 3.35e-11 | 39 |
electrically active cell | 3.35e-11 | 39 |
neural cell | 4.25e-11 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.34e-19 | 73 |
nervous system | 7.61e-19 | 75 |
ectoderm-derived structure | 9.75e-19 | 95 |
ectoderm | 9.75e-19 | 95 |
presumptive ectoderm | 9.75e-19 | 95 |
neurectoderm | 3.81e-18 | 64 |
neural plate | 3.81e-18 | 64 |
presumptive neural plate | 3.81e-18 | 64 |
regional part of nervous system | 7.86e-18 | 54 |
ecto-epithelium | 1.53e-17 | 73 |
neural tube | 1.77e-16 | 52 |
neural rod | 1.77e-16 | 52 |
future spinal cord | 1.77e-16 | 52 |
neural keel | 1.77e-16 | 52 |
gray matter | 1.06e-15 | 34 |
pre-chordal neural plate | 1.49e-15 | 49 |
regional part of forebrain | 7.60e-15 | 39 |
forebrain | 7.60e-15 | 39 |
future forebrain | 7.60e-15 | 39 |
anterior neural tube | 1.20e-14 | 40 |
brain | 1.67e-14 | 47 |
future brain | 1.67e-14 | 47 |
regional part of brain | 3.18e-14 | 46 |
brain grey matter | 1.29e-12 | 29 |
regional part of telencephalon | 1.29e-12 | 29 |
telencephalon | 1.29e-12 | 29 |
structure with developmental contribution from neural crest | 9.07e-12 | 92 |
cerebral cortex | 1.16e-08 | 21 |
cerebral hemisphere | 1.16e-08 | 21 |
pallium | 1.16e-08 | 21 |
regional part of cerebral cortex | 6.90e-07 | 17 |