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FFCP PHASE1:Mm9::chr15:96472742..96472778,-: Difference between revisions

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{{FFCP|EntrezGene=105727|HGNC=|MCL_coexpression_id=7|UniProt=Q8K2P7|association_with_transcript=0bp_to_ENSMUST00000088454,NM_001166456,uc007xki.2,uc007xkk.2,uc007xkl.2_5end|description=CAGE_peak_2_at_Slc38a1_5end|id=chr15:96472742..96472778,-|ontology_enrichment_celltype=CL:0000117!5.77e-10!23;CL:0000337!5.77e-10!23;CL:0002319!1.80e-07!43;CL:0000221!6.63e-07!44;CL:0000133!6.63e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-10,23;CL:0000337,5.70e-10,23;CL:0002319,1.79e-07,43;CL:0000221,6.58e-07,44;CL:0000133,6.58e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!4.52e-15!94;UBERON:0007811!8.13e-14!86;UBERON:0001017!1.63e-11!73;UBERON:0005743!1.63e-11!73;UBERON:0000073!4.92e-11!75;UBERON:0001016!4.92e-11!75;UBERON:0001049!1.19e-10!52;UBERON:0005068!1.19e-10!52;UBERON:0006241!1.19e-10!52;UBERON:0007135!1.19e-10!52;UBERON:0000955!2.85e-10!50;UBERON:0006238!2.85e-10!50;UBERON:0002616!8.87e-10!49;UBERON:0000033!4.43e-09!63;UBERON:0002020!1.50e-07!34;UBERON:0002346!3.42e-07!71;UBERON:0003075!3.42e-07!71;UBERON:0007284!3.42e-07!71;UBERON:0003056!7.95e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.60e-11,73;UBERON:0000073,2.76e-11,54;UBERON:0001016,4.86e-11,75;UBERON:0001049,1.17e-10,52;UBERON:0005068,1.17e-10,52;UBERON:0006241,1.17e-10,52;UBERON:0007135,1.17e-10,52;UBERON:0002346,1.07e-09,64;UBERON:0003075,1.07e-09,64;UBERON:0007284,1.07e-09,64;UBERON:0000955,3.88e-09,47;UBERON:0006238,3.88e-09,47;UBERON:0002616,1.16e-08,46;UBERON:0002020,1.49e-07,34;UBERON:0004121,1.57e-07,95;UBERON:0000924,1.57e-07,95;UBERON:0006601,1.57e-07,95;UBERON:0003056,7.90e-07,49|phase1_expression=3.84357233051505,2.09385244583617,2.72999543633722,1.20985684522732,0,5.54001597309236,6.07392865548367,7.23090611272827,142.337398095335,147.694716109178,33.7299397404245,42.7578772215003,10.9568467155972,9.87850547334671,11.6588416635482,10.7311891716608,3.49780939064073,5.99378114180652,7.54129384831563,5.51706547337439,6.37824676133023,18.8652807281682,19.0675846071423,4.31979541542198,3.89995777814189,2.29692785646008,2.15380998079537,6.03319451520489,3.6104449696711,4.53654233567875,7.76056787293567,13.9706748161119,15.3766196896143,15.8481681015439,4.62162591602039,5.31950865147176,4.08338712524738,2.51118978442145,6.2506827561904,3.14114246384279,0.588231488031014,0,0.971020706062307,0,0.202753862439029,0.183546752161682,5.47673941043627,25.7269684528927,36.0285339684534,42.9690076954166,41.9959264876088,21.5628846547457,7.55021727259814,10.1550699881588,10.4189077734164,5.40244815675489,5.44413535883638,6.18806510732931,18.8154308599426,19.5726662330652,13.3104594736298,5.42151251310611,7.11435836888911,1.3498495759221,2.96659908770092,4.2628806896766,29.6604109413221,59.9380556301625,17.6272340924412,15.7956947848078,20.4015212510841,10.2834354385369,12.3686382932904,9.79926393719632,13.8975932976443,12.8690630125403,11.0115880999389,22.6006588410782,21.5049146558741,13.58428763621,13.9976094711687,16.6692278578163,23.451371916116,20.2594539611405,23.2253336620751,13.8475435172624,12.6710795911202,15.2847545576746,6.58817881998701,3.32514864469856,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,2.94933282276679,0,0,0,1.97180787687353,0,0,0,1.73192832808971,2.02687892380079,2.02209778005913,2.51204535381932,18.125651855302,2.3750742250372,7.80683970447611,4.56698217468212,2.07553947530453,3.01445281105245,2.58695155698551,1.25666591329675,25.7082766443749,4.04878199375753,11.4999371753484,3.39710384889559,5.52103796150984,4.363877278217,5.59175283654366,60.8984057784018,37.7004072264219,2.55457055208591,10.4239158320151,5.39912457894067,9.65733725755292,34.0024751448948,9.60751265919116,7.91622418311046,11.4724051326902,8.69432554923124,23.6878370797899,14.2772311499627,3.05518091550949,2.98576729464223,0,4.8401626853889,9.10843100738926,7.81667155073808,8.46292010085141,8.59017461663576,5.57899293040888,10.249097622788,7.21503279109912,13.4525752784288,22.8502072508813,13.4265316919152,9.14945845652534,8.98702502953057,6.67313398141435,6.96504333044333,4.93877127379064,4.37875387000685,8.42655824775882,5.66165395652373,5.39910648851626,7.24940203874257,7.27030785941398,8.4629168886677,5.68187365404505,7.08351234290654,7.25055430570678,6.97601834251224,9.38956904898667,4.55384835231961,7.40519324610662,6.40253109908471,4.86412857275134,5.4093995347373,8.34290438105992,5.50246316917524,11.565947171027,12.2456488731348,5.61711931072457,12.4291766331866,11.7308537794379,11.6118335930219,13.1444810548535,13.3111126251406,15.3440850252961,13.5060194539917,5.21981967698963,8.39964669092456,6.78605063760728,10.1467800740987,15.0122347081723,10.7858329038507,8.86166004486246,8.36393347668342,6.06937283049861,7.88314737007129,7.88954149711563,5.29493452397817,4.46090720485539,4.20814919341911,2.59269802209455,3.09981310757165,2.66897837330337,1.72756029490521,0.296452627087149,11.0117769772622,10.614185736113,10.1187950573184,7.1001042485976,4.823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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=105727
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8K2P7
|association_with_transcript=0bp_to_ENSMUST00000088454,NM_001166456,uc007xki.2,uc007xkk.2,uc007xkl.2_5end
|cluster_id=chr15:96472742..96472778,-
|description=CAGE_peak_2_at_Slc38a1_5end
|id=chr15:96472742..96472778,-
|ontology_enrichment_celltype=CL:0000117!5.77e-10!23;CL:0000337!5.77e-10!23;CL:0002319!1.80e-07!43;CL:0000221!6.63e-07!44;CL:0000133!6.63e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-10,23;CL:0000337,5.70e-10,23;CL:0002319,1.79e-07,43;CL:0000221,6.58e-07,44;CL:0000133,6.58e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.52e-15!94;UBERON:0007811!8.13e-14!86;UBERON:0001017!1.63e-11!73;UBERON:0005743!1.63e-11!73;UBERON:0000073!4.92e-11!75;UBERON:0001016!4.92e-11!75;UBERON:0001049!1.19e-10!52;UBERON:0005068!1.19e-10!52;UBERON:0006241!1.19e-10!52;UBERON:0007135!1.19e-10!52;UBERON:0000955!2.85e-10!50;UBERON:0006238!2.85e-10!50;UBERON:0002616!8.87e-10!49;UBERON:0000033!4.43e-09!63;UBERON:0002020!1.50e-07!34;UBERON:0002346!3.42e-07!71;UBERON:0003075!3.42e-07!71;UBERON:0007284!3.42e-07!71;UBERON:0003056!7.95e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.60e-11,73;UBERON:0000073,2.76e-11,54;UBERON:0001016,4.86e-11,75;UBERON:0001049,1.17e-10,52;UBERON:0005068,1.17e-10,52;UBERON:0006241,1.17e-10,52;UBERON:0007135,1.17e-10,52;UBERON:0002346,1.07e-09,64;UBERON:0003075,1.07e-09,64;UBERON:0007284,1.07e-09,64;UBERON:0000955,3.88e-09,47;UBERON:0006238,3.88e-09,47;UBERON:0002616,1.16e-08,46;UBERON:0002020,1.49e-07,34;UBERON:0004121,1.57e-07,95;UBERON:0000924,1.57e-07,95;UBERON:0006601,1.57e-07,95;UBERON:0003056,7.90e-07,49
|phase1_expression=3.84357233051505,2.09385244583617,2.72999543633722,1.20985684522732,0,5.54001597309236,6.07392865548367,7.23090611272827,142.337398095335,147.694716109178,33.7299397404245,42.7578772215003,10.9568467155972,9.87850547334671,11.6588416635482,10.7311891716608,3.49780939064073,5.99378114180652,7.54129384831563,5.51706547337439,6.37824676133023,18.8652807281682,19.0675846071423,4.31979541542198,3.89995777814189,2.29692785646008,2.15380998079537,6.03319451520489,3.6104449696711,4.53654233567875,7.76056787293567,13.9706748161119,15.3766196896143,15.8481681015439,4.62162591602039,5.31950865147176,4.08338712524738,2.51118978442145,6.2506827561904,3.14114246384279,0.588231488031014,0,0.971020706062307,0,0.202753862439029,0.183546752161682,5.47673941043627,25.7269684528927,36.0285339684534,42.9690076954166,41.9959264876088,21.5628846547457,7.55021727259814,10.1550699881588,10.4189077734164,5.40244815675489,5.44413535883638,6.18806510732931,18.8154308599426,19.5726662330652,13.3104594736298,5.42151251310611,7.11435836888911,1.3498495759221,2.96659908770092,4.2628806896766,29.6604109413221,59.9380556301625,17.6272340924412,15.7956947848078,20.4015212510841,10.2834354385369,12.3686382932904,9.79926393719632,13.8975932976443,12.8690630125403,11.0115880999389,22.6006588410782,21.5049146558741,13.58428763621,13.9976094711687,16.6692278578163,23.451371916116,20.2594539611405,23.2253336620751,13.8475435172624,12.6710795911202,15.2847545576746,6.58817881998701,3.32514864469856,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,2.94933282276679,0,0,0,1.97180787687353,0,0,0,1.73192832808971,2.02687892380079,2.02209778005913,2.51204535381932,18.125651855302,2.3750742250372,7.80683970447611,4.56698217468212,2.07553947530453,3.01445281105245,2.58695155698551,1.25666591329675,25.7082766443749,4.04878199375753,11.4999371753484,3.39710384889559,5.52103796150984,4.363877278217,5.59175283654366,60.8984057784018,37.7004072264219,2.55457055208591,10.4239158320151,5.39912457894067,9.65733725755292,34.0024751448948,9.60751265919116,7.91622418311046,11.4724051326902,8.69432554923124,23.6878370797899,14.2772311499627,3.05518091550949,2.98576729464223,0,4.8401626853889,9.10843100738926,7.81667155073808,8.46292010085141,8.59017461663576,5.57899293040888,10.249097622788,7.21503279109912,13.4525752784288,22.8502072508813,13.4265316919152,9.14945845652534,8.98702502953057,6.67313398141435,6.96504333044333,4.93877127379064,4.37875387000685,8.42655824775882,5.66165395652373,5.39910648851626,7.24940203874257,7.27030785941398,8.4629168886677,5.68187365404505,7.08351234290654,7.25055430570678,6.97601834251224,9.38956904898667,4.55384835231961,7.40519324610662,6.40253109908471,4.86412857275134,5.4093995347373,8.34290438105992,5.50246316917524,11.565947171027,12.2456488731348,5.61711931072457,12.4291766331866,11.7308537794379,11.6118335930219,13.1444810548535,13.3111126251406,15.3440850252961,13.5060194539917,5.21981967698963,8.39964669092456,6.78605063760728,10.1467800740987,15.0122347081723,10.7858329038507,8.86166004486246,8.36393347668342,6.06937283049861,7.88314737007129,7.88954149711563,5.29493452397817,4.46090720485539,4.20814919341911,2.59269802209455,3.09981310757165,2.66897837330337,1.72756029490521,0.296452627087149,11.0117769772622,10.614185736113,10.1187950573184,7.1001042485976,4.82354319504834,2.80088436959562,6.04161888646702,3.24270453550071,4.11842119782122,0,1.86070473834252,0.624075346229121,0,0.538192240565737,0.482443521363367,5.35784251483154,9.28507917675375,6.84452901056509,7.29903868833309,6.80601720036656,2.34508760418542,2.85652369063216,1.56106918286239,1.10344600874334,1.55025282754142,2.39182152986231,2.94953966488328,2.76295970985433,2.74833211304872,1.50791283939272,2.71952841909355,0.491764273019036,0.551873492609465,30.6651626876683,25.7865710502847,7.70494243270374,0,4.41711507182759,3.90438744296638,2.80050417052639,4.06246956519338,3.56477878531831,4.52922449262132,2.42886421004937,5.55286130031493,5.13874111330481,25.3843839973228,10.9293865610367,2.49291845134157,3.4206261464251,25.570369060743,1.32745138339963,6.79785781233948,5.44182402536552,3.77210159511796,5.31543407185391,5.53383266299069,6.71913562237375,2.54473610634254,2.85197902707777,5.05658812697306,5.27093042874994,2.06271086496374,2.7235168460303,8.8229936075342,7.76152102696527,8.57348140126369,4.96552654198366,7.31312152168489,5.92376474167636,5.78483403317739,59.3719421401187,109.729012707459,13.4522322813527,0.8244312647074,1.13025098687134,1.68876189798836,1.19372344003136,1.47726809770555,10.7847909553045,38.3830375161755,10.9357363710626,5.15967169908056,7.40778109478847,10.7370020492674,11.2089266731241,6.86334519619568,13.4282959695146,11.7559219951873,15.0637971446822,5.72802370809068,10.597255784968,7.9294592179471,7.99239522081329,6.27264888043406,6.98760203987768,12.6772485601731,10.6622957885683,8.63794608547298,9.0730481304255,8.07741107013003,0.56369293868419,5.23307911153926,2.97825282822776,2.91676782516071,3.22899558694328,2.19642963138012,1.29092962510329,0.911430693907651,1.46803082195995,0.241584120826006,0.288030006257865,13.2724670663835,9.12263468805739,10.9900724166365,16.2401028722244,17.9026695667481,12.715606706001,16.3465811347158,15.5074003533306,15.044001042274,12.878950324695,14.6197968448419,14.5212242302231,11.8340565217605,7.48012173962041,2.0405734525369,22.8645531975287,22.069608725931,22.8323078255147,11.204996453867,55.9293776844522,24.5423176518135,12.6477343656649,9.02829787263654,9.60078132449013,6.44455331110048,9.16632821503035,7.38968684077857,3.42541259885321,5.2877572817279,6.75022500231806,6.30449684513909,7.70342095273148,4.65984280576638,9.44464863016008,14.3648954424371,8.87814749921498,8.265628380322,6.49800804146745,4.59608771125035,5.33392146723877,4.94484137373346,4.49286893428541,3.79045817645696,7.09742039692671,5.84741658296836,5.05664140337365,4.41773551593598,5.28406314391642,7.1444053692461,5.79421629724277,3.6652751888104,6.1812885120496,5.88795680537589,5.48590803816665,4.61437096014278,6.43777712857767,6.1045494985578,5.64656282491984,3.63842813934209,4.57319932181931,5.5244639401947,5.83957689537206,4.48913817326191,5.21994079746366,4.43270170690036,4.91077251803627,5.26785260032284,4.43685205256625,10.2422336954558,6.08222181958062,4.72716318906256,2.10417165275728,3.30887128679273,1.85494268496337
|short_description=p2@Slc38a1
}}

Latest revision as of 11:38, 1 October 2015

Short description:p2@Slc38a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc38a1_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000088454, NM_001166456, uc007xki.2, uc007xkk.2, uc007xkl.2_5end
EntrezGene:Slc38a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc38a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7142.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2147.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E633.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.76
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.07
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C342.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C442.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.55
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C829.66
Mouse Microglia, donor2.CNhs12634.11736-123E859.94
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D96.59
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H918.13
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A825.71
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B260.90
cerebellum, neonate N30.CNhs11135.1395-42I237.70
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.66
corpora quadrigemina, adult.CNhs10501.16-22A434.00
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E710.25
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E222.85
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A88.99
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G112.25
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A312.43
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D813.14
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E38.86
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F811.01
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G29.29
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C230.67
medulla oblongata, neonate N30.CNhs11200.1396-42A325.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I925.38
ovary, adult.CNhs10507.91-2I710.93
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I759.37
placenta, adult pregnant day17.CNhs10464.577-18G3109.73
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I110.78
spinal cord, adult.CNhs10505.24-13C938.38
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D110.74
spleen, neonate N20.CNhs11112.824-19H111.21
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.06
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E310.60
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D47.99
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B812.68
stomach, neonate N07.CNhs11210.718-18A910.66
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I19.07
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I210.99
thymus, embryo E16.CNhs11002.456-26C516.24
thymus, embryo E17.CNhs10581.478-18C117.90
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C715.51
thymus, neonate N06.CNhs11197.681-26C415.04
thymus, neonate N07.CNhs11211.713-19D312.88
thymus, neonate N10.CNhs11194.748-24E414.62
thymus, neonate N20.CNhs11186.820-7A214.52
thymus, neonate N25.CNhs11125.1362-25G711.83
thymus, neonate N30.CNhs11132.1393-42G27.48
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.83
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F555.93
uterus, adult.CNhs10509.92-27E524.54
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I89.44
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.70e-1023
neuroblast (sensu Vertebrata)5.70e-1023
neural cell1.79e-0743
ectodermal cell6.58e-0744
neurectodermal cell6.58e-0744

Uber anatomy
Ontology termp-valuen
central nervous system1.60e-1173
regional part of nervous system2.76e-1154
nervous system4.86e-1175
neural tube1.17e-1052
neural rod1.17e-1052
future spinal cord1.17e-1052
neural keel1.17e-1052
neurectoderm1.07e-0964
neural plate1.07e-0964
presumptive neural plate1.07e-0964
brain3.88e-0947
future brain3.88e-0947
regional part of brain1.16e-0846
gray matter1.49e-0734
ectoderm-derived structure1.57e-0795
ectoderm1.57e-0795
presumptive ectoderm1.57e-0795
pre-chordal neural plate7.90e-0749
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