FFCP PHASE1:Mm9::chr11:3795226..3795313,+: Difference between revisions
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{{FFCP|EntrezGene=75219|HGNC=|UniProt=Q8VE01,Q8BWD7|association_with_transcript=0bp_to_ENSMUST00000055931,ENSMUST00000109996,NM_173745,uc007htu.2_5end|description=CAGE_peak_1_at_Dusp18_5end|id=chr11:3795226..3795313,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.15e-18!63;UBERON:0003056!3.26e-18!49;UBERON:0004121!4.89e-17!102;UBERON:0000924!4.89e-17!102;UBERON:0006601!4.89e-17!102;UBERON:0003080!1.53e-16!40;UBERON:0002780!1.87e-16!39;UBERON:0001890!1.87e-16!39;UBERON:0006240!1.87e-16!39;UBERON:0000955!2.67e-15!50;UBERON:0006238!2.67e-15!50;UBERON:0001049!4.17e-15!52;UBERON:0005068!4.17e-15!52;UBERON:0006241!4.17e-15!52;UBERON:0007135!4.17e-15!52;UBERON:0000073!4.64e-15!75;UBERON:0001016!4.64e-15!75;UBERON:0001017!4.65e-15!73;UBERON:0005743!4.65e-15!73;UBERON:0002616!5.32e-15!49;UBERON:0002791!1.46e-12!29;UBERON:0003528!1.46e-12!29;UBERON:0001893!1.46e-12!29;UBERON:0002346!2.77e-12!71;UBERON:0003075!2.77e-12!71;UBERON:0007284!2.77e-12!71;UBERON:0002020!5.18e-12!34;UBERON:0000956!9.53e-11!21;UBERON:0001869!9.53e-11!21;UBERON:0000203!9.53e-11!21;UBERON:0002619!1.08e-09!17;UBERON:0004111!2.70e-09!122;UBERON:0000025!4.76e-09!114|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.50e-20,95;UBERON:0000924,4.50e-20,95;UBERON:0006601,4.50e-20,95;UBERON:0010314,1.36e-19,92;UBERON:0003056,2.93e-18,49;UBERON:0010371,3.22e-18,73;UBERON:0003080,1.39e-16,40;UBERON:0002780,1.70e-16,39;UBERON:0001890,1.70e-16,39;UBERON:0006240,1.70e-16,39;UBERON:0000955,7.71e-16,47;UBERON:0006238,7.71e-16,47;UBERON:0002616,1.53e-15,46;UBERON:0002346,1.83e-15,64;UBERON:0003075,1.83e-15,64;UBERON:0007284,1.83e-15,64;UBERON:0001049,3.82e-15,52;UBERON:0005068,3.82e-15,52;UBERON:0006241,3.82e-15,52;UBERON:0007135,3.82e-15,52;UBERON:0001016,4.26e-15,75;UBERON:0001017,4.27e-15,73;UBERON:0000073,7.83e-15,54;UBERON:0003528,1.36e-12,29;UBERON:0002791,1.36e-12,29;UBERON:0001893,1.36e-12,29;UBERON:0002020,4.85e-12,34;UBERON:0000956,8.98e-11,21;UBERON:0001869,8.98e-11,21;UBERON:0000203,8.98e-11,21;UBERON:0002619,1.02e-09,17;UBERON:0004111,1.43e-09,122;UBERON:0000025,2.53e-09,114|phase1_expression=19.2178616525753,1.04692622291808,2.27499619694768,0.60492842261366,1.00179145989269,6.04365378882803,6.30754129607919,0.903863264091034,0.281577444303333,0.234064526321993,0.34243593645101,0,0.513602189793617,0.524522414513984,0,0,0,0.946386496074713,0.822686601634433,1.27316895539409,23.7270779521485,2.28369187762036,0,4.7997726838022,3.21172993494038,1.14846392823004,1.29228598847722,1.939241094173,5.13063232532209,4.03248207615889,3.10422714917427,5.71527606113668,4.92051830067656,0,4.33277429626912,4.3221007793208,4.28755648150975,0,1.5626706890476,0.523523743973798,12.9410927366823,0.683045484958446,0,6.6725313527056,7.80602370390262,8.25960384727567,6.25913075478431,25.7269684528927,33.8316721411087,31.6920735491082,22.1178546168073,43.1257693094915,2.68452169692378,0.725362142011344,1.00828139742739,6.43148590089868,5.73066879877513,3.6097046459421,15.578367486189,23.8045940672415,9.50747105259269,8.13226876965917,8.00365316500025,2.6996991518442,0.988866362566974,2.8419204597844,16.7776061890307,32.6585559523321,12.9612015385597,16.7407363531296,10.5162480675691,4.85606673486466,7.50953039235486,16.6587486932338,15.7186572469908,13.7882817991503,7.70811166995721,8.68273898979276,8.44835932909339,21.761237475482,28.361169516747,28.129322010065,6.42120897703176,9.00420176050688,8.86229837105499,10.606629077052,11.6744778255264,13.9799584368975,6.96680978665293,11.7135918165518,13.0439019915755,0,0.679971333707751,0,0,0,12.3591089715942,17.5543232255399,11.950156211732,11.6602059588412,29.7179615728796,3.84979432242953,2.54805239706646,0,9.74209684550464,12.92135313923,7.07734223020697,4.22480354960522,1.55362730188303,5.78924342352817,3.81667718885499,3.95805121805784,2.99800146432876,5.12456977878917,4.46837087115678,3.51866455723091,8.15743393523434,14.749134405831,3.5384422077995,6.14714029800155,3.75430581382669,4.84875253135222,18.6391761218122,8.49064311333487,5.65506108396329,2.81002760729451,8.02761334189666,5.39912457894067,9.40319680340679,11.0845073159569,24.7050325522058,19.3507702253811,26.0736480288415,26.338692105024,11.6361304953354,13.9527486238272,5.09196819251581,6.09594155989456,20.217820674694,27.7783249770146,14.053007839972,10.5754968039398,13.5046597354012,13.1113191517072,11.4301318574231,14.7330778327577,7.96464658757695,10.8655415710387,10.993967639575,9.07709184805532,7.5658983390498,8.32943783224784,8.06337022754234,16.716103993064,20.1666493679785,5.9710280045548,8.42655824775882,4.63226232806487,4.54661599032948,19.4698226183372,14.3060896588469,11.523971933505,15.8618972842091,11.0187969778546,14.1925743856388,16.2773761325285,20.6570519077707,16.5806786161381,23.5320585376277,39.0718564508247,52.2893821570769,56.7255951210289,36.6648692536055,58.5139985795221,28.8097229532854,28.8132914661996,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75219 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8VE01,Q8BWD7 | |||
|association_with_transcript=0bp_to_ENSMUST00000055931,ENSMUST00000109996,NM_173745,uc007htu.2_5end | |||
|cluster_id=chr11:3795226..3795313,+ | |||
|description=CAGE_peak_1_at_Dusp18_5end | |||
|id=chr11:3795226..3795313,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.15e-18!63;UBERON:0003056!3.26e-18!49;UBERON:0004121!4.89e-17!102;UBERON:0000924!4.89e-17!102;UBERON:0006601!4.89e-17!102;UBERON:0003080!1.53e-16!40;UBERON:0002780!1.87e-16!39;UBERON:0001890!1.87e-16!39;UBERON:0006240!1.87e-16!39;UBERON:0000955!2.67e-15!50;UBERON:0006238!2.67e-15!50;UBERON:0001049!4.17e-15!52;UBERON:0005068!4.17e-15!52;UBERON:0006241!4.17e-15!52;UBERON:0007135!4.17e-15!52;UBERON:0000073!4.64e-15!75;UBERON:0001016!4.64e-15!75;UBERON:0001017!4.65e-15!73;UBERON:0005743!4.65e-15!73;UBERON:0002616!5.32e-15!49;UBERON:0002791!1.46e-12!29;UBERON:0003528!1.46e-12!29;UBERON:0001893!1.46e-12!29;UBERON:0002346!2.77e-12!71;UBERON:0003075!2.77e-12!71;UBERON:0007284!2.77e-12!71;UBERON:0002020!5.18e-12!34;UBERON:0000956!9.53e-11!21;UBERON:0001869!9.53e-11!21;UBERON:0000203!9.53e-11!21;UBERON:0002619!1.08e-09!17;UBERON:0004111!2.70e-09!122;UBERON:0000025!4.76e-09!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.50e-20,95;UBERON:0000924,4.50e-20,95;UBERON:0006601,4.50e-20,95;UBERON:0010314,1.36e-19,92;UBERON:0003056,2.93e-18,49;UBERON:0010371,3.22e-18,73;UBERON:0003080,1.39e-16,40;UBERON:0002780,1.70e-16,39;UBERON:0001890,1.70e-16,39;UBERON:0006240,1.70e-16,39;UBERON:0000955,7.71e-16,47;UBERON:0006238,7.71e-16,47;UBERON:0002616,1.53e-15,46;UBERON:0002346,1.83e-15,64;UBERON:0003075,1.83e-15,64;UBERON:0007284,1.83e-15,64;UBERON:0001049,3.82e-15,52;UBERON:0005068,3.82e-15,52;UBERON:0006241,3.82e-15,52;UBERON:0007135,3.82e-15,52;UBERON:0001016,4.26e-15,75;UBERON:0001017,4.27e-15,73;UBERON:0000073,7.83e-15,54;UBERON:0003528,1.36e-12,29;UBERON:0002791,1.36e-12,29;UBERON:0001893,1.36e-12,29;UBERON:0002020,4.85e-12,34;UBERON:0000956,8.98e-11,21;UBERON:0001869,8.98e-11,21;UBERON:0000203,8.98e-11,21;UBERON:0002619,1.02e-09,17;UBERON:0004111,1.43e-09,122;UBERON:0000025,2.53e-09,114 | |||
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| |||
|short_description=p1@Dusp18 | |||
}} |
Latest revision as of 11:34, 1 October 2015
Short description: | p1@Dusp18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dusp18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000055931, ENSMUST00000109996, NM_173745, uc007htu.2_5end |
EntrezGene: | Dusp18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.50e-20 | 95 |
ectoderm | 4.50e-20 | 95 |
presumptive ectoderm | 4.50e-20 | 95 |
structure with developmental contribution from neural crest | 1.36e-19 | 92 |
pre-chordal neural plate | 2.93e-18 | 49 |
ecto-epithelium | 3.22e-18 | 73 |
anterior neural tube | 1.39e-16 | 40 |
regional part of forebrain | 1.70e-16 | 39 |
forebrain | 1.70e-16 | 39 |
future forebrain | 1.70e-16 | 39 |
brain | 7.71e-16 | 47 |
future brain | 7.71e-16 | 47 |
regional part of brain | 1.53e-15 | 46 |
neurectoderm | 1.83e-15 | 64 |
neural plate | 1.83e-15 | 64 |
presumptive neural plate | 1.83e-15 | 64 |
neural tube | 3.82e-15 | 52 |
neural rod | 3.82e-15 | 52 |
future spinal cord | 3.82e-15 | 52 |
neural keel | 3.82e-15 | 52 |
nervous system | 4.26e-15 | 75 |
central nervous system | 4.27e-15 | 73 |
regional part of nervous system | 7.83e-15 | 54 |
brain grey matter | 1.36e-12 | 29 |
regional part of telencephalon | 1.36e-12 | 29 |
telencephalon | 1.36e-12 | 29 |
gray matter | 4.85e-12 | 34 |
cerebral cortex | 8.98e-11 | 21 |
cerebral hemisphere | 8.98e-11 | 21 |
pallium | 8.98e-11 | 21 |
regional part of cerebral cortex | 1.02e-09 | 17 |
anatomical conduit | 1.43e-09 | 122 |
tube | 2.53e-09 | 114 |