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FFCP PHASE1:Mm9::chr15:95359133..95359208,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:95359133..95359208,-
|DHSsupport=NA
|short_description=p1@Nell2
|DPIdataset=NA
|description=CAGE_peak_1_at_Nell2_5end
|association_with_transcript=0bp_to_ENSMUST00000166170,NM_016743,uc007xjr.1_5end
|EntrezGene=54003
|EntrezGene=54003
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80UM5
|UniProt=Q80UM5
|association_with_transcript=0bp_to_ENSMUST00000166170,NM_016743,uc007xjr.1_5end
|cluster_id=chr15:95359133..95359208,-
|description=CAGE_peak_1_at_Nell2_5end
|id=chr15:95359133..95359208,-
|ontology_enrichment_celltype=CL:0000540!1.46e-16!33;CL:0000047!1.46e-16!33;CL:0000031!1.46e-16!33;CL:0000404!1.46e-16!33;CL:0000221!3.74e-15!44;CL:0000133!3.74e-15!44;CL:0002319!4.66e-15!43;CL:0000117!4.21e-14!23;CL:0000337!4.21e-14!23;CL:0000393!8.51e-13!39;CL:0000211!8.51e-13!39;CL:0000055!1.85e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.22e-20,33;CL:0000047,4.22e-20,33;CL:0000031,4.22e-20,33;CL:0000404,4.22e-20,33;CL:0000221,4.01e-18,44;CL:0000133,4.01e-18,44;CL:0002319,5.27e-18,43;CL:0000117,4.66e-17,23;CL:0000337,4.66e-17,23;CL:0000393,7.85e-15,39;CL:0000211,7.85e-15,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.29e-35!73;UBERON:0005743!6.29e-35!73;UBERON:0000073!3.41e-33!75;UBERON:0001016!3.41e-33!75;UBERON:0004121!1.27e-29!102;UBERON:0000924!1.27e-29!102;UBERON:0006601!1.27e-29!102;UBERON:0002346!5.03e-29!71;UBERON:0003075!5.03e-29!71;UBERON:0007284!5.03e-29!71;UBERON:0000033!8.59e-28!63;UBERON:0001049!1.54e-27!52;UBERON:0005068!1.54e-27!52;UBERON:0006241!1.54e-27!52;UBERON:0007135!1.54e-27!52;UBERON:0000955!4.68e-26!50;UBERON:0006238!4.68e-26!50;UBERON:0002616!1.56e-25!49;UBERON:0003056!1.21e-22!49;UBERON:0002020!3.17e-21!34;UBERON:0003080!7.20e-21!40;UBERON:0002780!2.66e-20!39;UBERON:0001890!2.66e-20!39;UBERON:0006240!2.66e-20!39;UBERON:0002791!5.04e-18!29;UBERON:0003528!5.04e-18!29;UBERON:0001893!5.04e-18!29;UBERON:0007811!3.55e-14!86;UBERON:0000956!1.35e-13!21;UBERON:0001869!1.35e-13!21;UBERON:0000203!1.35e-13!21;UBERON:0000153!1.79e-13!94;UBERON:0002619!2.95e-11!17;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0000468!9.03e-08!333;UBERON:0003076!3.86e-07!12;UBERON:0003057!3.86e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.27e-42,73;UBERON:0001016,2.08e-40,75;UBERON:0002346,3.63e-36,64;UBERON:0003075,3.63e-36,64;UBERON:0007284,3.63e-36,64;UBERON:0004121,3.72e-35,95;UBERON:0000924,3.72e-35,95;UBERON:0006601,3.72e-35,95;UBERON:0000073,1.29e-34,54;UBERON:0001049,7.85e-33,52;UBERON:0005068,7.85e-33,52;UBERON:0006241,7.85e-33,52;UBERON:0007135,7.85e-33,52;UBERON:0010371,3.68e-30,73;UBERON:0000955,1.29e-28,47;UBERON:0006238,1.29e-28,47;UBERON:0002616,5.53e-28,46;UBERON:0003056,4.53e-27,49;UBERON:0002020,7.14e-26,34;UBERON:0003080,1.97e-25,40;UBERON:0002780,9.95e-25,39;UBERON:0001890,9.95e-25,39;UBERON:0006240,9.95e-25,39;UBERON:0010314,4.51e-22,92;UBERON:0003528,6.54e-22,29;UBERON:0002791,6.54e-22,29;UBERON:0001893,6.54e-22,29;UBERON:0000956,1.97e-16,21;UBERON:0001869,1.97e-16,21;UBERON:0000203,1.97e-16,21;UBERON:0002619,1.53e-13,17;UBERON:0002021,4.71e-10,10;UBERON:0000411,4.71e-10,10;UBERON:0001950,4.71e-10,10;UBERON:0003076,1.10e-07,12;UBERON:0003057,1.10e-07,12
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,13.2995345392072,2.85592037554813,3.4997381833371,4.89952475688769,0,0,0,0,0,0.286533439938757,0,28.3243045203437,23.8045940672415,31.0577387718028,0,0,0,0,0,3.89480143673926,3.07374644257244,25.611334240194,35.2365499045713,27.7628948983824,41.1337417541477,33.7928867655969,26.4580126304301,21.5652309791032,22.9804696652505,29.731287869835,36.5185786923637,27.9563890526363,43.7862475264244,36.5035697973615,33.3384557156326,20.6595419261022,18.0084035210138,32.0876320331301,42.4265163082082,33.4573449877892,31.5015063444758,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0,0,0,1.97180787687353,0,0,0,0,0,0,0.91347103775248,0,0,2.4287945747259,2.43572382649713,1.61430848079241,2.11011696773672,1.29347577849275,0,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,47.1377083188591,52.9900168238041,0.510914110417183,0,0,0,25.7639899776295,19.2150253183823,20.356005042284,67.270011914411,66.4860189058859,29.5059023274575,35.6930778749067,0.509196819251581,0.248813941220186,0,1.26265113531884,0.390361328888111,6.20735681970377,5.58192602396583,9.49440352365005,6.73561341598146,5.89323113310309,4.31027932974753,5.43277078551933,0.431135985865684,0.756424320671277,1.05570674498369,1.7535658594206,1.66828349535359,0,0.823128545631774,0.398068533636986,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,101.359755207909,48.0564539811258,0,0.264450566663544,2.34617075588757,1.62565670302307,0.77320476793256,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.658795818896044,0.502670417600539,0.795825888164603,0.779856348476481,0,0.648414149624083,0.398282546508734,0.189667900953082,0.228497025219458,0,1.01825663922657,0.193952487167626,0.701358198903186,0.442655759869801,0,0,0.246794327843601,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.327726629431476,0,0,0,0,0,0,13.9679013289379,20.0431984072667,0,0.252470927204373,6.31016438832513,3.90438744296638,8.40151251157916,3.58453196928828,4.67877215573028,7.64306633129848,6.8817819284732,5.84511715822624,8.30104333687699,15.7447445046685,0,0.534196811001766,0.977321756121456,0,0,1.45668381692989,0.906970670894253,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,4.76615448055303,1.44048875225048,1.94038025674132,3.85806663056866,3.72414490648775,6.77801506887868,5.92376474167636,4.26250928760439,0,0,0.882113592219848,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,16.6882771809459,0,1.03193433981611,1.48155621895769,0,0.136694227721025,0.228778173206523,0,0,0,0,1.73984796469624,1.21991680276109,1.18805874903981,1.67270636811575,1.52853794622324,2.15782954215713,1.23980183588004,0.785267825952089,0.388844919875379,0.621339313086926,0,0.448549638131936,0.496375471371293,0.194451188344048,0.774958940866387,1.01373675294467,1.64300134104056,2.0832701575032,1.36317147753424,0.241584120826006,0.864090018773596,0,2.43270258348197,0.513554785824136,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0.214368379079066,0,88.1012874482624,89.3030958823923,83.6427449621519,94.8629566537156,80.1546548131652,65.7192690729039,67.5022500231806,60.3430412320455,62.9867948488044,67.8266008394884,1.3492355185943,2.79317411380722,4.78054096111576,3.40349403895612,3.77303692730368,3.49302666055027,7.55638874525492,5.97501665992793,5.45562656306086,6.06473308233114,5.57654459758527,6.22466926574051,5.05664140337365,5.95433917365284,6.71994986780675,5.23923060411381,7.18482820858104,6.94473193669338,5.35711671044299,6.91834924631667,6.17164654293748,4.43689515398344,5.7224685587357,7.41266724824875,6.7758753899038,6.17686637609238,7.68297486065645,4.99832451731901,6.11118512306378,7.85599180320834,7.3553711236988,6.2057823896605,6.13846564754534,7.43696837692637,4.43685205256625,16.4874981439044,7.01794825336225,5.15690529715916,2.67803664896381,1.76473135295612,0.695603506861264
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,13.2995345392072,2.85592037554813,3.4997381833371,4.89952475688769,0,0,0,0,0,0.286533439938757,0,28.3243045203437,23.8045940672415,31.0577387718028,0,0,0,0,0,3.89480143673926,3.07374644257244,25.611334240194,35.2365499045713,27.7628948983824,41.1337417541477,33.7928867655969,26.4580126304301,21.5652309791032,22.9804696652505,29.731287869835,36.5185786923637,27.9563890526363,43.7862475264244,36.5035697973615,33.3384557156326,20.6595419261022,18.0084035210138,32.0876320331301,42.4265163082082,33.4573449877892,31.5015063444758,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0,0,0,1.97180787687353,0,0,0,0,0,0,0.91347103775248,0,0,2.4287945747259,2.43572382649713,1.61430848079241,2.11011696773672,1.29347577849275,0,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,47.1377083188591,52.9900168238041,0.510914110417183,0,0,0,25.7639899776295,19.2150253183823,20.356005042284,67.270011914411,66.4860189058859,29.5059023274575,35.6930778749067,0.509196819251581,0.248813941220186,0,1.26265113531884,0.390361328888111,6.20735681970377,5.58192602396583,9.49440352365005,6.73561341598146,5.89323113310309,4.31027932974753,5.43277078551933,0.431135985865684,0.756424320671277,1.05570674498369,1.7535658594206,1.66828349535359,0,0.823128545631774,0.398068533636986,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,101.359755207909,48.0564539811258,0,0.264450566663544,2.34617075588757,1.62565670302307,0.77320476793256,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.658795818896044,0.502670417600539,0.795825888164603,0.779856348476481,0,0.648414149624083,0.398282546508734,0.189667900953082,0.228497025219458,0,1.01825663922657,0.193952487167626,0.701358198903186,0.442655759869801,0,0,0.246794327843601,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.327726629431476,0,0,0,0,0,0,13.9679013289379,20.0431984072667,0,0.252470927204373,6.31016438832513,3.90438744296638,8.40151251157916,3.58453196928828,4.67877215573028,7.64306633129848,6.8817819284732,5.84511715822624,8.30104333687699,15.7447445046685,0,0.534196811001766,0.977321756121456,0,0,1.45668381692989,0.906970670894253,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,4.76615448055303,1.44048875225048,1.94038025674132,3.85806663056866,3.72414490648775,6.77801506887868,5.92376474167636,4.26250928760439,0,0,0.882113592219848,0,0.322928853391811,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,16.6882771809459,0,1.03193433981611,1.48155621895769,0,0.136694227721025,0.228778173206523,0,0,0,0,1.73984796469624,1.21991680276109,1.18805874903981,1.67270636811575,1.52853794622324,2.15782954215713,1.23980183588004,0.785267825952089,0.388844919875379,0.621339313086926,0,0.448549638131936,0.496375471371293,0.194451188344048,0.774958940866387,1.01373675294467,1.64300134104056,2.0832701575032,1.36317147753424,0.241584120826006,0.864090018773596,0,2.43270258348197,0.513554785824136,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0.214368379079066,0,88.1012874482624,89.3030958823923,83.6427449621519,94.8629566537156,80.1546548131652,65.7192690729039,67.5022500231806,60.3430412320455,62.9867948488044,67.8266008394884,1.3492355185943,2.79317411380722,4.78054096111576,3.40349403895612,3.77303692730368,3.49302666055027,7.55638874525492,5.97501665992793,5.45562656306086,6.06473308233114,5.57654459758527,6.22466926574051,5.05664140337365,5.95433917365284,6.71994986780675,5.23923060411381,7.18482820858104,6.94473193669338,5.35711671044299,6.91834924631667,6.17164654293748,4.43689515398344,5.7224685587357,7.41266724824875,6.7758753899038,6.17686637609238,7.68297486065645,4.99832451731901,6.11118512306378,7.85599180320834,7.3553711236988,6.2057823896605,6.13846564754534,7.43696837692637,4.43685205256625,16.4874981439044,7.01794825336225,5.15690529715916,2.67803664896381,1.76473135295612,0.695603506861264
|short_description=p1@Nell2
}}
}}

Latest revision as of 11:09, 1 October 2015

Short description:p1@Nell2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nell2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000166170, NM_016743, uc007xjr.1_5end
EntrezGene:Nell2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nell2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E323.80
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D443.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D833.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.50
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I252.99
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.76
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F120.36
cortex, adult.CNhs10473.12-14D567.27
cortex, neonate N30.CNhs11107.1392-42F266.49
diencephalon, adult.CNhs10482.20-12F229.51
diencephalon, neonate N30.CNhs11201.1388-42B235.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C66.74
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8101.36
hippocampus, neonate N00.CNhs11228.627-43G148.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A320.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C916.69
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A289.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D794.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A480.15
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A565.72
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A667.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A967.83
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I516.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.22e-2033
neuronal stem cell4.22e-2033
neuroblast4.22e-2033
electrically signaling cell4.22e-2033
ectodermal cell4.01e-1844
neurectodermal cell4.01e-1844
neural cell5.27e-1843
CNS neuron (sensu Vertebrata)4.66e-1723
neuroblast (sensu Vertebrata)4.66e-1723
electrically responsive cell7.85e-1539
electrically active cell7.85e-1539

Uber anatomy
Ontology termp-valuen
central nervous system2.27e-4273
nervous system2.08e-4075
neurectoderm3.63e-3664
neural plate3.63e-3664
presumptive neural plate3.63e-3664
ectoderm-derived structure3.72e-3595
ectoderm3.72e-3595
presumptive ectoderm3.72e-3595
regional part of nervous system1.29e-3454
neural tube7.85e-3352
neural rod7.85e-3352
future spinal cord7.85e-3352
neural keel7.85e-3352
ecto-epithelium3.68e-3073
brain1.29e-2847
future brain1.29e-2847
regional part of brain5.53e-2846
pre-chordal neural plate4.53e-2749
gray matter7.14e-2634
anterior neural tube1.97e-2540
regional part of forebrain9.95e-2539
forebrain9.95e-2539
future forebrain9.95e-2539
structure with developmental contribution from neural crest4.51e-2292
brain grey matter6.54e-2229
regional part of telencephalon6.54e-2229
telencephalon6.54e-2229
cerebral cortex1.97e-1621
cerebral hemisphere1.97e-1621
pallium1.97e-1621
regional part of cerebral cortex1.53e-1317
occipital lobe4.71e-1010
visual cortex4.71e-1010
neocortex4.71e-1010
posterior neural tube1.10e-0712
chordal neural plate1.10e-0712
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