FFCP PHASE1:Mm9::chr15:91881607..91881656,+: Difference between revisions
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{{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=1|UniProt=P12960|association_with_transcript=11bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end|description=CAGE_peak_1_at_Cntn1_5end|id=chr15:91881607..91881656,+|ontology_enrichment_celltype=CL:0000221!7.23e-15!44;CL:0000133!7.23e-15!44;CL:0002319!2.45e-14!43;CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000117!3.28e-11!23;CL:0000337!3.28e-11!23;CL:0000055!3.46e-09!50;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.34e-16,44;CL:0000133,2.34e-16,44;CL:0002319,9.45e-16,43;CL:0000540,2.88e-15,33;CL:0000047,2.88e-15,33;CL:0000031,2.88e-15,33;CL:0000404,2.88e-15,33;CL:0000117,1.16e-12,23;CL:0000337,1.16e-12,23;CL:0000393,9.22e-11,39;CL:0000211,9.22e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.90e-35!73;UBERON:0005743!4.90e-35!73;UBERON:0000073!5.48e-35!75;UBERON:0001016!5.48e-35!75;UBERON:0004121!8.70e-34!102;UBERON:0000924!8.70e-34!102;UBERON:0006601!8.70e-34!102;UBERON:0002346!6.68e-30!71;UBERON:0003075!6.68e-30!71;UBERON:0007284!6.68e-30!71;UBERON:0000033!2.58e-29!63;UBERON:0001049!3.77e-27!52;UBERON:0005068!3.77e-27!52;UBERON:0006241!3.77e-27!52;UBERON:0007135!3.77e-27!52;UBERON:0000955!4.53e-26!50;UBERON:0006238!4.53e-26!50;UBERON:0002616!1.92e-25!49;UBERON:0003056!6.69e-24!49;UBERON:0003080!6.82e-21!40;UBERON:0002780!3.01e-20!39;UBERON:0001890!3.01e-20!39;UBERON:0006240!3.01e-20!39;UBERON:0002020!4.14e-18!34;UBERON:0007811!3.94e-15!86;UBERON:0002791!3.97e-15!29;UBERON:0003528!3.97e-15!29;UBERON:0001893!3.97e-15!29;UBERON:0000153!1.10e-14!94;UBERON:0000956!6.05e-11!21;UBERON:0001869!6.05e-11!21;UBERON:0000203!6.05e-11!21;UBERON:0002619!4.79e-10!17;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0000468!1.75e-07!333;UBERON:0003076!9.20e-07!12;UBERON:0003057!9.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-39,73;UBERON:0001016,2.15e-39,75;UBERON:0004121,2.72e-37,95;UBERON:0000924,2.72e-37,95;UBERON:0006601,2.72e-37,95;UBERON:0002346,1.75e-35,64;UBERON:0003075,1.75e-35,64;UBERON:0007284,1.75e-35,64;UBERON:0000073,3.60e-32,54;UBERON:0010371,9.94e-32,73;UBERON:0001049,2.36e-30,52;UBERON:0005068,2.36e-30,52;UBERON:0006241,2.36e-30,52;UBERON:0007135,2.36e-30,52;UBERON:0003056,2.84e-27,49;UBERON:0000955,1.67e-26,47;UBERON:0006238,1.67e-26,47;UBERON:0002616,8.44e-26,46;UBERON:0003080,8.27e-24,40;UBERON:0002780,4.57e-23,39;UBERON:0001890,4.57e-23,39;UBERON:0006240,4.57e-23,39;UBERON:0002020,1.33e-20,34;UBERON:0010314,5.58e-20,92;UBERON:0003528,3.60e-17,29;UBERON:0002791,3.60e-17,29;UBERON:0001893,3.60e-17,29;UBERON:0000956,2.35e-12,21;UBERON:0001869,2.35e-12,21;UBERON:0000203,2.35e-12,21;UBERON:0002619,2.53e-11,17;UBERON:0002021,5.17e-09,10;UBERON:0000411,5.17e-09,10;UBERON:0001950,5.17e-09,10;UBERON:0003076,5.79e-07,12;UBERON:0003057,5.79e-07,12;UBERON:0001894,8.41e-07,10;UBERON:0006222,8.41e-07,10|phase1_expression=14.733693933641,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.171200729931206,0,0,0,0,0.315462165358238,0.411343300817216,0,22.5364718900335,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.57852828398938,7.0299578475031,23.5260177879883,1.39986421625363,1.43752564364972,0,0,0,0,0,0,14.1621522601718,17.4567023159771,19.6487735086916,0,0,0,0,0.7104801149461,5.09320187881288,10.7581125490035,5.70292867696627,4.72520784160917,5.8890989178387,89.4087581183905,83.2674399387583,6.85948475603743,6.13411014516713,8.27296907949019,113.41935742937,129.858022832636,131.487192467344,13.8480602116704,20.6762074541446,21.8783615633839,89.0593766814405,105.236608075924,114.751484080384,104.003890672205,117.45663665926,33.3655008027288,1.4387976733305,2.11600368298999,0,0,0,0,0,0,5.75822122540183,0,0,0,57.323271849109,0,0,0,0,0,0,2.96878087269556,2.33044095282455,1.1875371125186,1.04091196059682,0.304465478312141,0.691846491768175,2.41156224884196,1.76383060703557,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,82.2714039602448,102.628886338593,0,0,0,0,104.703656943971,84.6376115214459,44.6072950000669,113.333456765364,123.76628134788,100.153837477708,121.680947300818,1.32391173005411,0.497627882440372,0,4.8401626853889,1.56144531555244,5.51765050640335,10.4436035287103,15.9747106905858,20.0707672496417,21.7793324484245,25.3931673556865,26.9051505568576,0,1.70195472151037,1.05570674498369,1.31517439456545,2.50242524303038,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,94.209896956729,32.4149528994746,0.330418782983798,0.264450566663544,1.06644125267617,0.928946687441754,1.9330119198314,1.61346819698674,0.889512175379481,1.90225626112559,0,1.64698954724011,3.2673577144035,3.97912944082302,4.09424582950152,1.797638817308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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12805 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P12960 | |||
|association_with_transcript=11bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end | |||
|cluster_id=chr15:91881607..91881656,+ | |||
|description=CAGE_peak_1_at_Cntn1_5end | |||
|id=chr15:91881607..91881656,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.23e-15!44;CL:0000133!7.23e-15!44;CL:0002319!2.45e-14!43;CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000117!3.28e-11!23;CL:0000337!3.28e-11!23;CL:0000055!3.46e-09!50;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.34e-16,44;CL:0000133,2.34e-16,44;CL:0002319,9.45e-16,43;CL:0000540,2.88e-15,33;CL:0000047,2.88e-15,33;CL:0000031,2.88e-15,33;CL:0000404,2.88e-15,33;CL:0000117,1.16e-12,23;CL:0000337,1.16e-12,23;CL:0000393,9.22e-11,39;CL:0000211,9.22e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.90e-35!73;UBERON:0005743!4.90e-35!73;UBERON:0000073!5.48e-35!75;UBERON:0001016!5.48e-35!75;UBERON:0004121!8.70e-34!102;UBERON:0000924!8.70e-34!102;UBERON:0006601!8.70e-34!102;UBERON:0002346!6.68e-30!71;UBERON:0003075!6.68e-30!71;UBERON:0007284!6.68e-30!71;UBERON:0000033!2.58e-29!63;UBERON:0001049!3.77e-27!52;UBERON:0005068!3.77e-27!52;UBERON:0006241!3.77e-27!52;UBERON:0007135!3.77e-27!52;UBERON:0000955!4.53e-26!50;UBERON:0006238!4.53e-26!50;UBERON:0002616!1.92e-25!49;UBERON:0003056!6.69e-24!49;UBERON:0003080!6.82e-21!40;UBERON:0002780!3.01e-20!39;UBERON:0001890!3.01e-20!39;UBERON:0006240!3.01e-20!39;UBERON:0002020!4.14e-18!34;UBERON:0007811!3.94e-15!86;UBERON:0002791!3.97e-15!29;UBERON:0003528!3.97e-15!29;UBERON:0001893!3.97e-15!29;UBERON:0000153!1.10e-14!94;UBERON:0000956!6.05e-11!21;UBERON:0001869!6.05e-11!21;UBERON:0000203!6.05e-11!21;UBERON:0002619!4.79e-10!17;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0000468!1.75e-07!333;UBERON:0003076!9.20e-07!12;UBERON:0003057!9.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-39,73;UBERON:0001016,2.15e-39,75;UBERON:0004121,2.72e-37,95;UBERON:0000924,2.72e-37,95;UBERON:0006601,2.72e-37,95;UBERON:0002346,1.75e-35,64;UBERON:0003075,1.75e-35,64;UBERON:0007284,1.75e-35,64;UBERON:0000073,3.60e-32,54;UBERON:0010371,9.94e-32,73;UBERON:0001049,2.36e-30,52;UBERON:0005068,2.36e-30,52;UBERON:0006241,2.36e-30,52;UBERON:0007135,2.36e-30,52;UBERON:0003056,2.84e-27,49;UBERON:0000955,1.67e-26,47;UBERON:0006238,1.67e-26,47;UBERON:0002616,8.44e-26,46;UBERON:0003080,8.27e-24,40;UBERON:0002780,4.57e-23,39;UBERON:0001890,4.57e-23,39;UBERON:0006240,4.57e-23,39;UBERON:0002020,1.33e-20,34;UBERON:0010314,5.58e-20,92;UBERON:0003528,3.60e-17,29;UBERON:0002791,3.60e-17,29;UBERON:0001893,3.60e-17,29;UBERON:0000956,2.35e-12,21;UBERON:0001869,2.35e-12,21;UBERON:0000203,2.35e-12,21;UBERON:0002619,2.53e-11,17;UBERON:0002021,5.17e-09,10;UBERON:0000411,5.17e-09,10;UBERON:0001950,5.17e-09,10;UBERON:0003076,5.79e-07,12;UBERON:0003057,5.79e-07,12;UBERON:0001894,8.41e-07,10;UBERON:0006222,8.41e-07,10 | |||
|phase1_expression=14.733693933641,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.171200729931206,0,0,0,0,0.315462165358238,0.411343300817216,0,22.5364718900335,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.57852828398938,7.0299578475031,23.5260177879883,1.39986421625363,1.43752564364972,0,0,0,0,0,0,14.1621522601718,17.4567023159771,19.6487735086916,0,0,0,0,0.7104801149461,5.09320187881288,10.7581125490035,5.70292867696627,4.72520784160917,5.8890989178387,89.4087581183905,83.2674399387583,6.85948475603743,6.13411014516713,8.27296907949019,113.41935742937,129.858022832636,131.487192467344,13.8480602116704,20.6762074541446,21.8783615633839,89.0593766814405,105.236608075924,114.751484080384,104.003890672205,117.45663665926,33.3655008027288,1.4387976733305,2.11600368298999,0,0,0,0,0,0,5.75822122540183,0,0,0,57.323271849109,0,0,0,0,0,0,2.96878087269556,2.33044095282455,1.1875371125186,1.04091196059682,0.304465478312141,0.691846491768175,2.41156224884196,1.76383060703557,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,82.2714039602448,102.628886338593,0,0,0,0,104.703656943971,84.6376115214459,44.6072950000669,113.333456765364,123.76628134788,100.153837477708,121.680947300818,1.32391173005411,0.497627882440372,0,4.8401626853889,1.56144531555244,5.51765050640335,10.4436035287103,15.9747106905858,20.0707672496417,21.7793324484245,25.3931673556865,26.9051505568576,0,1.70195472151037,1.05570674498369,1.31517439456545,2.50242524303038,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,94.209896956729,32.4149528994746,0.330418782983798,0.264450566663544,1.06644125267617,0.928946687441754,1.9330119198314,1.61346819698674,0.889512175379481,1.90225626112559,0,1.64698954724011,3.2673577144035,3.97912944082302,4.09424582950152,1.79763881730844,1.72910439899755,1.99141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.203651327845314,0.775809948670503,0.911765658574141,0.632365371242573,1.47610147979602,1.255989822731,0.493588655687202,0.296452627087149,0.500535317148282,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.325929952884052,0,0.938760993154008,0.502518772325447,0,0,0.472905432318573,1.10732344824387,2.07291199254733,0.983179888294428,0.863424909329478,0.723245292907558,0,0.54390568381871,0,0.275936746304732,99.541365792431,120.493613816785,0,0.504941854408746,6.94118082715765,8.98009111882268,16.1567548299599,1.91175038362042,2.67358408898873,3.39691836946599,5.66734982344852,15.4895604692995,10.6727700045561,85.1501488517789,0.99358059645788,1.78065603667255,1.46598263418218,4.12425307431339,0,0.242780636154981,0.604647113929502,0.377210159511796,0.885905678642318,1.22974059177571,1.03371317267288,0,0.356497378384721,0.632073515871632,0,0,32.0013229408561,13.5045820523483,13.5826617971892,27.863814554107,42.2069756068611,31.5712807155665,29.6188237083818,13.0919928119278,0,0,0.882113592219848,1.15420377059036,0.807322133479528,0.603129249281559,0.238744688006273,1.47726809770555,1.1659233465194,117.188790870642,0,0.412773735926445,0.925972636848558,0.188368457004691,0.136694227721025,0,0,0,0,0,1.10717597753397,2.23651413839534,2.80813886136683,1.88179466413022,1.09181281873089,3.10187996685088,2.97552440611209,1.30877970992015,2.07383957266869,0.621339313086926,0,0.149516546043979,0.827292452285488,1.36115831840833,0.387479470433193,0.506868376472335,0.704143431874524,0.2604087696879,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0.513554785824136,0.25984164595559,0.716106782669926,0.79472541912506,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0.467507608726276,0.226730383615211,0.221985953374065,0,0,0.386379188064381,3.75364950902364,5.31139710375069,1.07184189539533,0,132.151931172394,148.685051391818,139.213609765773,114.62607262324,119.204358440092,129.172356453639,112.05373503848,107.626767570589,106.488466111288,109.247425779634,0.31136204275253,1.19707462020309,3.58540572083682,3.16038732188782,2.72497111416377,5.88299227040045,5.778414922842,7.62329711783909,8.98573786857083,7.58091635291392,9.12525479604863,7.9223063382152,8.5213771797593,8.83547103187196,8.04096565378586,5.23923060411381,9.618399053423,9.06673336179414,7.41754621445952,7.50714492685426,7.20025430009372,8.87379030796687,7.62995807831427,8.57543858130738,9.2227192807024,9.22299226019274,9.14639864363863,8.15516105457313,8.55565917228929,2.24456908663095,8.77899134118889,8.27437651954733,6.95692773388472,6.50734732981057,6.55882477335881,9.74261253957989,10.292990771598,6.23126056740065,5.7386499620653,5.29419405886837,4.40548887678801 | |||
|short_description=p1@Cntn1 | |||
}} |
Latest revision as of 08:44, 27 September 2015
Short description: | p1@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000141187, ENSMUST00000169825, NM_001159648, uc007xii.1, uc007xim.2_5end |
EntrezGene: | Cntn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.34e-16 | 44 |
neurectodermal cell | 2.34e-16 | 44 |
neural cell | 9.45e-16 | 43 |
neuron | 2.88e-15 | 33 |
neuronal stem cell | 2.88e-15 | 33 |
neuroblast | 2.88e-15 | 33 |
electrically signaling cell | 2.88e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.16e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-12 | 23 |
electrically responsive cell | 9.22e-11 | 39 |
electrically active cell | 9.22e-11 | 39 |