FFCP PHASE1:Mm9::chr4:99323046..99323073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15221 | |EntrezGene=15221 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |MCL_coexpression_id=107 | ||
|TSSclassifier=NA | |||
|UniProt=A2BDY3,Q61060 | |UniProt=A2BDY3,Q61060 | ||
|association_with_transcript=56bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end | |association_with_transcript=56bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end | ||
|cluster_id=chr4:99323046..99323073,+ | |||
|description=CAGE_peak_3_at_Foxd3_5end | |description=CAGE_peak_3_at_Foxd3_5end | ||
|id=chr4:99323046..99323073,+ | |id=chr4:99323046..99323073,+ | ||
|ontology_enrichment_celltype=CL:0000107!3.82e-15!9;CL:0000221!3.08e-11!44;CL:0000133!3.08e-11!44;CL:0002319!2.80e-10!43;CL:0000055!3.63e-10!50;CL:0000393!5.59e-09!39;CL:0000211!5.59e-09!39;CL:0000540!7.82e-09!33;CL:0000047!7.82e-09!33;CL:0000031!7.82e-09!33;CL:0000404!7.82e-09!33;CL:0002321!5.13e-08!70;CL:0000220!5.13e-08!70 | |ontology_enrichment_celltype=CL:0000107!3.82e-15!9;CL:0000221!3.08e-11!44;CL:0000133!3.08e-11!44;CL:0002319!2.80e-10!43;CL:0000055!3.63e-10!50;CL:0000393!5.59e-09!39;CL:0000211!5.59e-09!39;CL:0000540!7.82e-09!33;CL:0000047!7.82e-09!33;CL:0000031!7.82e-09!33;CL:0000404!7.82e-09!33;CL:0002321!5.13e-08!70;CL:0000220!5.13e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.33e-60,9;CL:0000221,5.81e-25,44;CL:0000133,5.81e-25,44;CL:0002319,9.96e-22,43;CL:0000540,6.39e-16,33;CL:0000047,6.39e-16,33;CL:0000031,6.39e-16,33;CL:0000404,6.39e-16,33;CL:0002321,2.74e-15,70;CL:0000217,4.75e-15,2;CL:0000328,4.75e-15,2;CL:0002573,4.75e-15,2;CL:0002376,4.75e-15,2;CL:0000218,4.75e-15,2;CL:0000692,4.75e-15,2;CL:0002377,4.75e-15,2;CL:0002375,4.75e-15,2;CL:0000393,2.40e-13,39;CL:0000211,2.40e-13,39;CL:0000215,2.41e-10,3;CL:0000710,7.68e-08,1;CL:0002077,7.68e-08,1;CL:0005014,7.68e-08,1;CL:0002315,7.68e-08,1;CL:0002490,7.68e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.73e-18!11;UBERON:0002410!3.82e-15!9 | |ontology_enrichment_uberon=UBERON:0000010!2.73e-18!11;UBERON:0002410!3.82e-15!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.33e-74,11;UBERON:0002410,3.33e-60,9;UBERON:0000011,2.08e-21,3;UBERON:0010313,2.44e-21,3;UBERON:0002342,2.44e-21,3;UBERON:0002005,2.44e-21,3;UBERON:0005428,2.44e-21,3;UBERON:0005062,2.44e-21,3;UBERON:0000013,1.85e-20,3;UBERON:0001016,5.54e-12,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0001017,2.64e-08,73 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,1.19840044207362,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.589257170947335,0.427115042397309,0.372798891650601,3.63485727999283,9.06858721281426,0,0,0.679971333707751,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,2.2085575359138,4.29482618726302,5.38558494331997,3.82350076724083,5.34716817797746,3.39691836946599,2.42886421004937,2.92255857911312,1.58115111178609,0.642642632843614,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0.412085900803307,0,0,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.80074423552397,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,1.19840044207362,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.589257170947335,0.427115042397309,0.372798891650601,3.63485727999283,9.06858721281426,0,0,0.679971333707751,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,2.2085575359138,4.29482618726302,5.38558494331997,3.82350076724083,5.34716817797746,3.39691836946599,2.42886421004937,2.92255857911312,1.58115111178609,0.642642632843614,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0.412085900803307,0,0,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p3@Foxd3 | |short_description=p3@Foxd3 | ||
}} | }} |
Latest revision as of 08:39, 27 September 2015
Short description: | p3@Foxd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Foxd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 56bp_to_ENSMUST00000087285, NM_010425, uc008tuv.1_5end |
EntrezGene: | Foxd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.33e-60 | 9 |
ectodermal cell | 5.81e-25 | 44 |
neurectodermal cell | 5.81e-25 | 44 |
neural cell | 9.96e-22 | 43 |
neuron | 6.39e-16 | 33 |
neuronal stem cell | 6.39e-16 | 33 |
neuroblast | 6.39e-16 | 33 |
electrically signaling cell | 6.39e-16 | 33 |
embryonic cell | 2.74e-15 | 70 |
insulating cell | 4.75e-15 | 2 |
myelin accumulating cell | 4.75e-15 | 2 |
Schwann cell | 4.75e-15 | 2 |
non-myelinating Schwann cell | 4.75e-15 | 2 |
myelinating Schwann cell;;Schwann cell | 4.75e-15 | 2 |
terminal Schwann cell | 4.75e-15 | 2 |
immature Schwann cell | 4.75e-15 | 2 |
Schwann cell precursor | 4.75e-15 | 2 |
electrically responsive cell | 2.40e-13 | 39 |
electrically active cell | 2.40e-13 | 39 |
barrier cell | 2.41e-10 | 3 |
neurecto-epithelial cell | 7.68e-08 | 1 |
ecto-epithelial cell | 7.68e-08 | 1 |
auditory epithelial support cell | 7.68e-08 | 1 |
supporting cell of cochlea | 7.68e-08 | 1 |
organ of Corti supporting cell | 7.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.33e-74 | 11 |
autonomic nervous system | 3.33e-60 | 9 |
parasympathetic nervous system | 2.08e-21 | 3 |
neural crest-derived structure | 2.44e-21 | 3 |
neural crest | 2.44e-21 | 3 |
enteric nervous system | 2.44e-21 | 3 |
vagal neural crest | 2.44e-21 | 3 |
neural fold | 2.44e-21 | 3 |
sympathetic nervous system | 1.85e-20 | 3 |
nervous system | 5.54e-12 | 75 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
central nervous system | 2.64e-08 | 73 |