FFCP PHASE1:Mm9::chr4:99322855..99322867,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15221|HGNC=|MCL_coexpression_id=107|UniProt=A2BDY3,Q61060|association_with_transcript=-122bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end|description=CAGE_peak_2_at_Foxd3_5end|id=chr4:99322855..99322867,+|ontology_enrichment_celltype=CL:0000107!8.72e-13!9;CL:0000221!7.40e-08!44;CL:0000133!7.40e-08!44;CL:0000540!3.38e-07!33;CL:0000047!3.38e-07!33;CL:0000031!3.38e-07!33;CL:0000404!3.38e-07!33;CL:0002319!4.19e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,4.57e-60,9;CL:0000221,5.81e-25,44;CL:0000133,5.81e-25,44;CL:0002319,1.36e-21,43;CL:0000540,1.54e-19,33;CL:0000047,1.54e-19,33;CL:0000031,1.54e-19,33;CL:0000404,1.54e-19,33;CL:0000393,2.15e-16,39;CL:0000211,2.15e-16,39;CL:0002321,2.74e-15,70;CL:0000217,1.05e-14,2;CL:0000328,1.05e-14,2;CL:0002573,1.05e-14,2;CL:0002376,1.05e-14,2;CL:0000218,1.05e-14,2;CL:0000692,1.05e-14,2;CL:0002377,1.05e-14,2;CL:0002375,1.05e-14,2;CL:0000197,2.29e-14,2;CL:0002491,2.29e-14,2;CL:0000098,2.29e-14,2;CL:0000215,4.07e-10,3;CL:0000710,2.54e-08,1;CL:0002077,2.54e-08,1;CL:0005014,2.54e-08,1;CL:0002315,2.54e-08,1;CL:0002490,2.54e-08,1;CL:0002374,1.05e-07,1;CL:0000202,1.05e-07,1;CL:0000199,1.05e-07,1;CL:0000855,1.05e-07,1;CL:0000589,1.05e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.52e-15!11;UBERON:0002410!8.72e-13!9;UBERON:0001948!5.28e-07!5;UBERON:0002315!5.28e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.92e-73,11;UBERON:0002410,4.57e-60,9;UBERON:0000011,9.43e-22,3;UBERON:0010313,9.96e-21,3;UBERON:0002342,9.96e-21,3;UBERON:0002005,9.96e-21,3;UBERON:0005428,9.96e-21,3;UBERON:0005062,9.96e-21,3;UBERON:0000013,1.36e-20,3;UBERON:0004766,2.29e-14,2;UBERON:0008193,2.29e-14,2;UBERON:0005913,2.29e-14,2;UBERON:0011158,2.29e-14,2;UBERON:0005744,2.29e-14,2;UBERON:0003457,2.29e-14,2;UBERON:0008001,2.29e-14,2;UBERON:0007497,2.29e-14,2;UBERON:0009955,2.29e-14,2;UBERON:0003067,2.29e-14,2;UBERON:0002546,2.29e-14,2;UBERON:0007914,2.29e-14,2;UBERON:0005253,2.29e-14,2;UBERON:0002227,2.29e-14,2;UBERON:0001846,2.29e-14,2;UBERON:0004339,2.29e-14,2;UBERON:0002105,2.29e-14,2;UBERON:0001678,2.29e-14,2;UBERON:0003128,2.29e-14,2;UBERON:0001694,2.29e-14,2;UBERON:0004681,2.29e-14,2;UBERON:0001839,2.29e-14,2;UBERON:0001690,2.29e-14,2;UBERON:0001844,2.29e-14,2;UBERON:0001849,2.29e-14,2;UBERON:0002499,2.29e-14,2;UBERON:0001855,2.29e-14,2;UBERON:0011137,2.29e-14,2;UBERON:0001703,2.29e-14,2;UBERON:0010323,2.29e-14,2;UBERON:0003129,2.29e-14,2;UBERON:0003069,2.29e-14,2;UBERON:0003051,2.29e-14,2;UBERON:0004637,2.29e-14,2;UBERON:0004761,2.29e-14,2;UBERON:0010113,2.29e-14,2;UBERON:0009123,2.29e-14,2;UBERON:0010351,2.29e-14,2;UBERON:0009617,2.29e-14,2;UBERON:0005641,2.29e-14,2;UBERON:0010349,2.29e-14,2;UBERON:0001016,6.62e-12,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0001017,2.75e-08,73|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0.427115042397309,0.931997229126503,3.18050011999373,9.52201657345497,0,0,0,0,0,0,0,0,0,0,4.64783285263046,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10160685241134,3.12350995437311,4.30846795465598,4.54040716109849,5.34716817797746,5.37845408498782,4.04810701674894,3.50707029493574,3.55759000151871,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0,0,0,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.385813221962283,0.749431733813838,0,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p2@Foxd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15221 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=A2BDY3,Q61060 | |||
|association_with_transcript=-122bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end | |||
|cluster_id=chr4:99322855..99322867,+ | |||
|description=CAGE_peak_2_at_Foxd3_5end | |||
|id=chr4:99322855..99322867,+ | |||
|ontology_enrichment_celltype=CL:0000107!8.72e-13!9;CL:0000221!7.40e-08!44;CL:0000133!7.40e-08!44;CL:0000540!3.38e-07!33;CL:0000047!3.38e-07!33;CL:0000031!3.38e-07!33;CL:0000404!3.38e-07!33;CL:0002319!4.19e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.57e-60,9;CL:0000221,5.81e-25,44;CL:0000133,5.81e-25,44;CL:0002319,1.36e-21,43;CL:0000540,1.54e-19,33;CL:0000047,1.54e-19,33;CL:0000031,1.54e-19,33;CL:0000404,1.54e-19,33;CL:0000393,2.15e-16,39;CL:0000211,2.15e-16,39;CL:0002321,2.74e-15,70;CL:0000217,1.05e-14,2;CL:0000328,1.05e-14,2;CL:0002573,1.05e-14,2;CL:0002376,1.05e-14,2;CL:0000218,1.05e-14,2;CL:0000692,1.05e-14,2;CL:0002377,1.05e-14,2;CL:0002375,1.05e-14,2;CL:0000197,2.29e-14,2;CL:0002491,2.29e-14,2;CL:0000098,2.29e-14,2;CL:0000215,4.07e-10,3;CL:0000710,2.54e-08,1;CL:0002077,2.54e-08,1;CL:0005014,2.54e-08,1;CL:0002315,2.54e-08,1;CL:0002490,2.54e-08,1;CL:0002374,1.05e-07,1;CL:0000202,1.05e-07,1;CL:0000199,1.05e-07,1;CL:0000855,1.05e-07,1;CL:0000589,1.05e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.52e-15!11;UBERON:0002410!8.72e-13!9;UBERON:0001948!5.28e-07!5;UBERON:0002315!5.28e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.92e-73,11;UBERON:0002410,4.57e-60,9;UBERON:0000011,9.43e-22,3;UBERON:0010313,9.96e-21,3;UBERON:0002342,9.96e-21,3;UBERON:0002005,9.96e-21,3;UBERON:0005428,9.96e-21,3;UBERON:0005062,9.96e-21,3;UBERON:0000013,1.36e-20,3;UBERON:0004766,2.29e-14,2;UBERON:0008193,2.29e-14,2;UBERON:0005913,2.29e-14,2;UBERON:0011158,2.29e-14,2;UBERON:0005744,2.29e-14,2;UBERON:0003457,2.29e-14,2;UBERON:0008001,2.29e-14,2;UBERON:0007497,2.29e-14,2;UBERON:0009955,2.29e-14,2;UBERON:0003067,2.29e-14,2;UBERON:0002546,2.29e-14,2;UBERON:0007914,2.29e-14,2;UBERON:0005253,2.29e-14,2;UBERON:0002227,2.29e-14,2;UBERON:0001846,2.29e-14,2;UBERON:0004339,2.29e-14,2;UBERON:0002105,2.29e-14,2;UBERON:0001678,2.29e-14,2;UBERON:0003128,2.29e-14,2;UBERON:0001694,2.29e-14,2;UBERON:0004681,2.29e-14,2;UBERON:0001839,2.29e-14,2;UBERON:0001690,2.29e-14,2;UBERON:0001844,2.29e-14,2;UBERON:0001849,2.29e-14,2;UBERON:0002499,2.29e-14,2;UBERON:0001855,2.29e-14,2;UBERON:0011137,2.29e-14,2;UBERON:0001703,2.29e-14,2;UBERON:0010323,2.29e-14,2;UBERON:0003129,2.29e-14,2;UBERON:0003069,2.29e-14,2;UBERON:0003051,2.29e-14,2;UBERON:0004637,2.29e-14,2;UBERON:0004761,2.29e-14,2;UBERON:0010113,2.29e-14,2;UBERON:0009123,2.29e-14,2;UBERON:0010351,2.29e-14,2;UBERON:0009617,2.29e-14,2;UBERON:0005641,2.29e-14,2;UBERON:0010349,2.29e-14,2;UBERON:0001016,6.62e-12,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0001017,2.75e-08,73 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0.427115042397309,0.931997229126503,3.18050011999373,9.52201657345497,0,0,0,0,0,0,0,0,0,0,4.64783285263046,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10160685241134,3.12350995437311,4.30846795465598,4.54040716109849,5.34716817797746,5.37845408498782,4.04810701674894,3.50707029493574,3.55759000151871,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0,0,0,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.385813221962283,0.749431733813838,0,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p2@Foxd3 | |||
}} |
Latest revision as of 08:39, 27 September 2015
Short description: | p2@Foxd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Foxd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -122bp_to_ENSMUST00000087285, NM_010425, uc008tuv.1_5end |
EntrezGene: | Foxd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data