FFCP PHASE1:Mm9::chr3:112959660..112959680,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:112959660..112959680,-
|short_description=p1@Amy2b
|description=CAGE_peak_1_at_Amy2b_5end
|association_with_transcript=-15bp_to_ENSMUST00000120184,NM_00119...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545562 | |EntrezGene=545562 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENSMUST00000120184,NM_001190403,NM_001190404,uc008rav.2,uc012cwi.1_5end | |||
|cluster_id=chr3:112959660..112959680,- | |||
|description=CAGE_peak_1_at_Amy2b_5end | |||
|id=chr3:112959660..112959680,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001264!4.78e-35!12;UBERON:0003922!4.78e-35!12;UBERON:0002114!4.78e-35!12;UBERON:0003923!4.78e-35!12;UBERON:0003924!4.78e-35!12;UBERON:0003921!4.78e-35!12;UBERON:0005409!2.36e-33!59;UBERON:0001045!3.76e-32!13;UBERON:0000160!2.21e-31!43;UBERON:0002108!7.24e-30!16;UBERON:0002075!8.91e-25!19;UBERON:0004921!7.54e-14!126;UBERON:0004185!7.54e-14!126;UBERON:0001007!1.53e-13!128;UBERON:0001555!1.53e-13!128;UBERON:0007026!1.53e-13!128;UBERON:0004119!3.02e-13!130;UBERON:0000925!3.02e-13!130;UBERON:0006595!3.02e-13!130;UBERON:0002323!2.47e-11!37;UBERON:0004458!2.47e-11!37;UBERON:0003886!5.83e-11!38;UBERON:0002553!1.31e-10!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.03e-68,12;UBERON:0002075,1.60e-42,19;UBERON:0002323,2.12e-21,37;UBERON:0004458,2.12e-21,37;UBERON:0003886,8.23e-21,38;UBERON:0002553,2.98e-20,39;UBERON:0000949,1.78e-10,72;UBERON:0005177,1.91e-09,79;UBERON:0002100,3.84e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0.257734922644187,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8941249011933,0.242780636154981,2.11626489875326,9.43025398779491,2.95301892880773,9.83792473420568,3.35956781118687,5.08947221268508,4.9909632973861,16.1178746547266,14.7586052004998,21.6584640821192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0,1.42323626988794,0.324016022465404,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0.257734922644187,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8941249011933,0.242780636154981,2.11626489875326,9.43025398779491,2.95301892880773,9.83792473420568,3.35956781118687,5.08947221268508,4.9909632973861,16.1178746547266,14.7586052004998,21.6584640821192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0,1.42323626988794,0.324016022465404,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p1@Amy2b | |||
}} | }} |
Latest revision as of 08:32, 27 September 2015
Short description: | p1@Amy2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Amy2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | -15bp_to_ENSMUST00000120184, NM_001190403, NM_001190404, uc008rav.2, uc012cwi.1_5end |
EntrezGene: | Amy2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 9.03e-68 | 12 |
viscus | 1.60e-42 | 19 |
body cavity | 2.12e-21 | 37 |
body cavity or lining | 2.12e-21 | 37 |
body cavity precursor | 8.23e-21 | 38 |
anatomical cavity | 2.98e-20 | 39 |
endocrine system | 1.78e-10 | 72 |
trunk region element | 1.91e-09 | 79 |
trunk | 3.84e-08 | 90 |