FFCP PHASE1:Mm9::chr13:24508610..24508619,+: Difference between revisions
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{{FFCP|EntrezGene=12763|HGNC=|MCL_coexpression_id=187|UniProt=|association_with_transcript=13bp_to_uc007pvv.2_5end|description=CAGE_peak_14_at_Cmah_5end|id=chr13:24508610..24508619,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000838,6.55e-20,12;CL:0000542,1.97e-18,13;CL:0000051,1.97e-18,13;CL:0000625,4.83e-16,1;CL:0000945,1.33e-15,1;CL:0000236,1.33e-15,1;CL:0000826,1.33e-15,1;CL:0000791,2.36e-15,9;CL:0000789,2.36e-15,9;CL:0002420,2.36e-15,9;CL:0002419,2.36e-15,9;CL:0000790,2.36e-15,9;CL:0002031,6.51e-15,25;CL:0000738,3.01e-14,17;CL:0002087,3.01e-14,17;CL:0000084,1.04e-12,11;CL:0000827,1.04e-12,11;CL:0000988,9.34e-12,32;CL:0002032,9.34e-12,32;CL:0000037,9.34e-12,32;CL:0000837,9.34e-12,32;CL:0002320,2.67e-08,46;CL:0000134,2.67e-08,46;CL:0000624,2.89e-08,8;CL:0000219,4.03e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.34e-13!48;UBERON:0004177!4.70e-12!29;UBERON:0002390!3.97e-10!45;UBERON:0003061!3.97e-10!45;UBERON:0002370!7.73e-10!23;UBERON:0000974!7.73e-10!23;UBERON:0004807!7.73e-10!23;UBERON:0005058!7.73e-10!23;UBERON:0003351!7.73e-10!23;UBERON:0009113!7.73e-10!23;UBERON:0003295!7.73e-10!23;UBERON:0009722!7.73e-10!23;UBERON:0005562!7.73e-10!23;UBERON:0007690!7.73e-10!23;UBERON:0000065!9.37e-10!41;UBERON:0001004!2.01e-09!42;UBERON:0006562!2.60e-09!24;UBERON:0003408!2.60e-09!24;UBERON:0001557!2.60e-09!24;UBERON:0001042!2.60e-09!24;UBERON:0008814!2.60e-09!24;UBERON:0009145!2.60e-09!24;UBERON:0002405!1.51e-08!70;UBERON:0000072!5.69e-08!27;UBERON:0003081!1.21e-07!88;UBERON:0002465!2.82e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.44e-16,1;UBERON:0001097,3.44e-16,1;UBERON:0003968,3.44e-16,1;UBERON:0001467,3.44e-16,1;UBERON:0002384,2.67e-08,46|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,1.54080656938085,0.611942816932982,0,0.202475267389826,0,1.26184866143295,0.822686601634433,0,0,0,0,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.43769555659061,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0.941842285023455,0.410082683163076,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.198681354781265,0.360586348559907,0,0.201932899896295,0.609654453239999,0.403304740547362,0.0974578807397524,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p14@Cmah}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12763 | |||
|HGNC= | |||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=13bp_to_uc007pvv.2_5end | |||
|cluster_id=chr13:24508610..24508619,+ | |||
|description=CAGE_peak_14_at_Cmah_5end | |||
|id=chr13:24508610..24508619,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.55e-20,12;CL:0000542,1.97e-18,13;CL:0000051,1.97e-18,13;CL:0000625,4.83e-16,1;CL:0000945,1.33e-15,1;CL:0000236,1.33e-15,1;CL:0000826,1.33e-15,1;CL:0000791,2.36e-15,9;CL:0000789,2.36e-15,9;CL:0002420,2.36e-15,9;CL:0002419,2.36e-15,9;CL:0000790,2.36e-15,9;CL:0002031,6.51e-15,25;CL:0000738,3.01e-14,17;CL:0002087,3.01e-14,17;CL:0000084,1.04e-12,11;CL:0000827,1.04e-12,11;CL:0000988,9.34e-12,32;CL:0002032,9.34e-12,32;CL:0000037,9.34e-12,32;CL:0000837,9.34e-12,32;CL:0002320,2.67e-08,46;CL:0000134,2.67e-08,46;CL:0000624,2.89e-08,8;CL:0000219,4.03e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-13!48;UBERON:0004177!4.70e-12!29;UBERON:0002390!3.97e-10!45;UBERON:0003061!3.97e-10!45;UBERON:0002370!7.73e-10!23;UBERON:0000974!7.73e-10!23;UBERON:0004807!7.73e-10!23;UBERON:0005058!7.73e-10!23;UBERON:0003351!7.73e-10!23;UBERON:0009113!7.73e-10!23;UBERON:0003295!7.73e-10!23;UBERON:0009722!7.73e-10!23;UBERON:0005562!7.73e-10!23;UBERON:0007690!7.73e-10!23;UBERON:0000065!9.37e-10!41;UBERON:0001004!2.01e-09!42;UBERON:0006562!2.60e-09!24;UBERON:0003408!2.60e-09!24;UBERON:0001557!2.60e-09!24;UBERON:0001042!2.60e-09!24;UBERON:0008814!2.60e-09!24;UBERON:0009145!2.60e-09!24;UBERON:0002405!1.51e-08!70;UBERON:0000072!5.69e-08!27;UBERON:0003081!1.21e-07!88;UBERON:0002465!2.82e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.44e-16,1;UBERON:0001097,3.44e-16,1;UBERON:0003968,3.44e-16,1;UBERON:0001467,3.44e-16,1;UBERON:0002384,2.67e-08,46 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,1.54080656938085,0.611942816932982,0,0.202475267389826,0,1.26184866143295,0.822686601634433,0,0,0,0,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.43769555659061,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0.941842285023455,0.410082683163076,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.198681354781265,0.360586348559907,0,0.201932899896295,0.609654453239999,0.403304740547362,0.0974578807397524,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@Cmah | |||
}} |
Latest revision as of 07:40, 27 September 2015
Short description: | p14@Cmah |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Cmah_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | 13bp_to_uc007pvv.2_5end |
EntrezGene: | Cmah |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.55e-20 | 12 |
lymphocyte | 1.97e-18 | 13 |
common lymphoid progenitor | 1.97e-18 | 13 |
CD8-positive, alpha-beta T cell | 4.83e-16 | 1 |
lymphocyte of B lineage | 1.33e-15 | 1 |
B cell | 1.33e-15 | 1 |
pro-B cell | 1.33e-15 | 1 |
mature alpha-beta T cell | 2.36e-15 | 9 |
alpha-beta T cell | 2.36e-15 | 9 |
immature T cell | 2.36e-15 | 9 |
mature T cell | 2.36e-15 | 9 |
immature alpha-beta T cell | 2.36e-15 | 9 |
hematopoietic lineage restricted progenitor cell | 6.51e-15 | 25 |
leukocyte | 3.01e-14 | 17 |
nongranular leukocyte | 3.01e-14 | 17 |
T cell | 1.04e-12 | 11 |
pro-T cell | 1.04e-12 | 11 |
hematopoietic cell | 9.34e-12 | 32 |
hematopoietic oligopotent progenitor cell | 9.34e-12 | 32 |
hematopoietic stem cell | 9.34e-12 | 32 |
hematopoietic multipotent progenitor cell | 9.34e-12 | 32 |
connective tissue cell | 2.67e-08 | 46 |
mesenchymal cell | 2.67e-08 | 46 |
CD4-positive, alpha-beta T cell | 2.89e-08 | 8 |
motile cell | 4.03e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.44e-16 | 1 |
axillary lymph node | 3.44e-16 | 1 |
peripheral lymph node | 3.44e-16 | 1 |
shoulder | 3.44e-16 | 1 |
connective tissue | 2.67e-08 | 46 |