FFCP PHASE1:Mm9::chr3:108218929..108218968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53883 | |EntrezGene=53883 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=A2AEE7 | |UniProt=A2AEE7 | ||
|association_with_transcript=-459bp_to_ENSMUST00000090558_5end | |association_with_transcript=-459bp_to_ENSMUST00000090558_5end | ||
|cluster_id=chr3:108218929..108218968,- | |||
|description=CAGE_peak_1_at_Celsr2_5end | |description=CAGE_peak_1_at_Celsr2_5end | ||
|id=chr3:108218929..108218968,- | |id=chr3:108218929..108218968,- | ||
|ontology_enrichment_celltype=CL:0000221!6.76e-17!44;CL:0000133!6.76e-17!44;CL:0002319!1.51e-16!43;CL:0000540!1.79e-14!33;CL:0000047!1.79e-14!33;CL:0000031!1.79e-14!33;CL:0000404!1.79e-14!33;CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0000055!3.54e-10!50;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39 | |ontology_enrichment_celltype=CL:0000221!6.76e-17!44;CL:0000133!6.76e-17!44;CL:0002319!1.51e-16!43;CL:0000540!1.79e-14!33;CL:0000047!1.79e-14!33;CL:0000031!1.79e-14!33;CL:0000404!1.79e-14!33;CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0000055!3.54e-10!50;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.06e-17,44;CL:0000133,4.06e-17,44;CL:0002319,9.19e-17,43;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000117,1.09e-12,23;CL:0000337,1.09e-12,23;CL:0000393,4.25e-09,39;CL:0000211,4.25e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.30e-36!102;UBERON:0000924!2.30e-36!102;UBERON:0006601!2.30e-36!102;UBERON:0001017!3.05e-33!73;UBERON:0005743!3.05e-33!73;UBERON:0000073!3.40e-32!75;UBERON:0001016!3.40e-32!75;UBERON:0000033!1.99e-26!63;UBERON:0002346!2.22e-24!71;UBERON:0003075!2.22e-24!71;UBERON:0007284!2.22e-24!71;UBERON:0001049!1.17e-23!52;UBERON:0005068!1.17e-23!52;UBERON:0006241!1.17e-23!52;UBERON:0007135!1.17e-23!52;UBERON:0000955!4.89e-23!50;UBERON:0006238!4.89e-23!50;UBERON:0002616!1.71e-22!49;UBERON:0003056!8.55e-21!49;UBERON:0002020!2.20e-19!34;UBERON:0003080!2.36e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!4.40e-17!29;UBERON:0003528!4.40e-17!29;UBERON:0001893!4.40e-17!29;UBERON:0007811!3.65e-15!86;UBERON:0000153!1.33e-14!94;UBERON:0000956!4.74e-13!21;UBERON:0001869!4.74e-13!21;UBERON:0000203!4.74e-13!21;UBERON:0002619!1.26e-10!17;UBERON:0000468!4.43e-09!333;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0000475!3.28e-07!200;UBERON:0000922!6.73e-07!328 | |ontology_enrichment_uberon=UBERON:0004121!2.30e-36!102;UBERON:0000924!2.30e-36!102;UBERON:0006601!2.30e-36!102;UBERON:0001017!3.05e-33!73;UBERON:0005743!3.05e-33!73;UBERON:0000073!3.40e-32!75;UBERON:0001016!3.40e-32!75;UBERON:0000033!1.99e-26!63;UBERON:0002346!2.22e-24!71;UBERON:0003075!2.22e-24!71;UBERON:0007284!2.22e-24!71;UBERON:0001049!1.17e-23!52;UBERON:0005068!1.17e-23!52;UBERON:0006241!1.17e-23!52;UBERON:0007135!1.17e-23!52;UBERON:0000955!4.89e-23!50;UBERON:0006238!4.89e-23!50;UBERON:0002616!1.71e-22!49;UBERON:0003056!8.55e-21!49;UBERON:0002020!2.20e-19!34;UBERON:0003080!2.36e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!4.40e-17!29;UBERON:0003528!4.40e-17!29;UBERON:0001893!4.40e-17!29;UBERON:0007811!3.65e-15!86;UBERON:0000153!1.33e-14!94;UBERON:0000956!4.74e-13!21;UBERON:0001869!4.74e-13!21;UBERON:0000203!4.74e-13!21;UBERON:0002619!1.26e-10!17;UBERON:0000468!4.43e-09!333;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0000475!3.28e-07!200;UBERON:0000922!6.73e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.37e-39,95;UBERON:0000924,1.37e-39,95;UBERON:0006601,1.37e-39,95;UBERON:0001017,1.06e-33,73;UBERON:0001016,1.22e-32,75;UBERON:0010371,1.65e-31,73;UBERON:0002346,1.67e-27,64;UBERON:0003075,1.67e-27,64;UBERON:0007284,1.67e-27,64;UBERON:0000073,2.27e-25,54;UBERON:0001049,5.63e-24,52;UBERON:0005068,5.63e-24,52;UBERON:0006241,5.63e-24,52;UBERON:0007135,5.63e-24,52;UBERON:0000955,2.39e-21,47;UBERON:0006238,2.39e-21,47;UBERON:0003056,4.52e-21,49;UBERON:0002616,8.31e-21,46;UBERON:0002020,1.22e-19,34;UBERON:0003080,1.35e-18,40;UBERON:0002780,6.36e-18,39;UBERON:0001890,6.36e-18,39;UBERON:0006240,6.36e-18,39;UBERON:0003528,2.63e-17,29;UBERON:0002791,2.63e-17,29;UBERON:0001893,2.63e-17,29;UBERON:0010314,1.48e-15,92;UBERON:0000956,3.24e-13,21;UBERON:0001869,3.24e-13,21;UBERON:0000203,3.24e-13,21;UBERON:0002619,9.34e-11,17;UBERON:0002021,9.64e-08,10;UBERON:0000411,9.64e-08,10;UBERON:0001950,9.64e-08,10;UBERON:0000479,8.64e-07,349 | |||
|phase1_expression=9.92922852049723,0,0,0,0,1.6787927191189,1.63528848416868,0.903863264091034,2.111830832275,2.57470978954193,0.513653904676515,0.398860794976682,1.02720437958723,0.874204024189974,0.999329285446988,1.21485160433896,0,0.315462165358238,0.548457734422955,0,20.3253463461057,1.09220046320974,0,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0,0.252030129759931,0.665191531965914,0,0,0,2.3108129580102,2.82598897109437,4.28755648150975,0,0,0,0,0,0,0,0.304130793658544,0,3.12956537739216,69.7680500417429,30.9757517655605,35.5806715305939,14.4186014274123,54.6259744586892,0.671130424230945,0.725362142011344,3.02484419228218,0,0,0,44.3073049282519,46.5512061759389,46.9035238594573,4.40497891689872,3.55717918444456,0,0,0.7104801149461,36.8508135937638,71.0803864844876,52.9853918896321,50.4922209360523,53.6328651446024,46.56111045782,30.4798586513227,35.6448225715516,34.9835969216563,30.3342199581307,52.8556228797066,58.7361755191863,51.3045821075853,41.0166354840903,34.4908416381084,32.2966289745191,49.6945738222458,43.895483582471,45.5338778374894,32.9984015730508,32.7454865837937,41.7534758648673,1.06016670666458,6.19686792875641,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,4.91555470461132,0,0,0,23.5208511027056,0,0,0,4.97929394325792,5.32055717497707,3.53867111510348,5.1382745873577,0.517875767294343,3.56261133755579,4.68410382268567,4.56698217468212,3.92046345335299,4.06951129492081,2.58695155698551,2.26199864393416,0,3.61498392299779,0,0.647067399789637,2.42925670306433,0,3.72783522436244,29.8636412951778,39.7948742945565,2.81002760729451,0.11981512450592,0,0,57.2200242526423,57.6450759551469,41.8428992535839,62.7505795894118,70.3217507658409,43.8432774020672,52.5661692339535,6.21220119486929,4.97627882440372,8.08712826987759,20.412860020988,9.62891277924007,13.5642241615749,17.8261508507296,17.6324636867787,30.9566071138542,19.3451717630123,24.7372552837684,17.3331258395141,2.37124792226126,2.83659120251729,5.10258260075452,6.57587197282724,8.34141747676794,17.4126083261083,12.3469281844766,4.17971960318836,0,0.257347907114715,0,2.07125772535502,0.938104239924385,2.34080679899319,2.84093682702252,1.18058539048442,1.54267112887378,0.697601834251224,2.41446061259657,1.63471479314037,1.81015834904829,1.97000956894914,1.13496333364198,1.02339991197733,2.41505126820156,3.08674763148855,60.5635051864686,39.6182757660245,1.65209391491899,0.528901133327089,4.47905326123991,3.48355007790658,3.99489130098489,3.02525286935014,3.55804870151792,2.28270751335071,0.949058123089023,1.31759163779209,2.01068167040216,2.58643413653496,2.33956904542944,2.69645822596266,1.72910439899755,2.58883655230677,8.53505554288868,10.3966146474853,20.2873924211545,9.77526373657508,12.412959178728,13.6063490587218,29.4049897627796,28.193538264104,23.863806631889,23.0752696533767,0.592905254174298,1.16791574001266,0.982794975566015,0.899448449539415,0.608580364165509,0.964708639009667,0.25462585178142,1.43848068725405,0.648540907100142,0.549122826376163,0,0.744281895337007,1.24815069245824,1.51547326768267,0.717589654087649,0.482443521363367,4.98833613449833,3.22135400009824,4.72598431681875,5.43184274480602,4.92849521405854,3.68513766371995,5.2369600994923,5.65887578787617,4.72905432318573,4.87222317227305,5.58091690301205,4.26044618260919,5.69860440157455,6.94315481191256,0,0,26.555270743028,25.3861806600354,45.9174687365085,42.665053919562,0,4.54447668967871,14.5133780931478,11.7131623288992,21.3269163755471,18.8785350382516,18.2694912747563,22.0799694015289,16.1924280669958,13.4437694639203,15.4162233399144,42.0930924512567,6.67118400478862,4.80777129901589,4.0721739838394,13.5275500837479,30.5313818181915,7.52619972080442,10.2790009368015,8.29862350925952,11.8120757152309,10.1453598821496,4.39328098385976,10.1789444253702,11.7644134866958,12.6414703174326,14.7586052004998,22.6898195146011,10.5536277783674,7.38250485528372,11.6422815404479,9.64516657642165,9.75371285032505,8.91844088010353,6.08831376227848,10.656273219011,0.469343416127421,0.42366414172764,2.42581237860458,30.9986155529982,17.5996225098537,27.6836325420235,46.1970971292138,53.1816515173998,0.874442509889552,52.2899351669637,0.341741761595705,2.06386867963222,0.740778109478847,0,0.27338845544205,0.686334519619568,0.509935289981566,0.139951452323658,0.276399947608848,2.86401185404534,3.95419991976419,11.5892096262304,8.7484326065659,9.40897332065109,10.0446779323242,9.17077555416781,11.2408699786457,13.3495530411855,2.46268449254406,7.45607175704311,1.69107881605257,1.19613236835183,1.98550188548517,2.33341426012857,1.93739735216597,1.68956125490778,2.69921648885234,3.6457227756306,1.67774951081137,2.17425708743405,2.88030006257865,4.10814456816632,4.45995473638361,2.67048488628551,2.20865399062252,2.68540043501222,3.3775830312815,4.08664528367894,3.83992770653901,3.73575864808146,3.42930629947499,2.41982844328417,3.50848370663109,3.17499077413087,3.85693777199178,29.0214891027471,0.887943813496259,0.17942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| ||
|short_description=p1@Celsr2 | |short_description=p1@Celsr2 | ||
}} | }} |
Latest revision as of 07:31, 27 September 2015
Short description: | p1@Celsr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celsr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -459bp_to_ENSMUST00000090558_5end |
EntrezGene: | Celsr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.06e-17 | 44 |
neurectodermal cell | 4.06e-17 | 44 |
neural cell | 9.19e-17 | 43 |
neuron | 1.16e-14 | 33 |
neuronal stem cell | 1.16e-14 | 33 |
neuroblast | 1.16e-14 | 33 |
electrically signaling cell | 1.16e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.09e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-12 | 23 |
electrically responsive cell | 4.25e-09 | 39 |
electrically active cell | 4.25e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.37e-39 | 95 |
ectoderm | 1.37e-39 | 95 |
presumptive ectoderm | 1.37e-39 | 95 |
central nervous system | 1.06e-33 | 73 |
nervous system | 1.22e-32 | 75 |
ecto-epithelium | 1.65e-31 | 73 |
neurectoderm | 1.67e-27 | 64 |
neural plate | 1.67e-27 | 64 |
presumptive neural plate | 1.67e-27 | 64 |
regional part of nervous system | 2.27e-25 | 54 |
neural tube | 5.63e-24 | 52 |
neural rod | 5.63e-24 | 52 |
future spinal cord | 5.63e-24 | 52 |
neural keel | 5.63e-24 | 52 |
brain | 2.39e-21 | 47 |
future brain | 2.39e-21 | 47 |
pre-chordal neural plate | 4.52e-21 | 49 |
regional part of brain | 8.31e-21 | 46 |
gray matter | 1.22e-19 | 34 |
anterior neural tube | 1.35e-18 | 40 |
regional part of forebrain | 6.36e-18 | 39 |
forebrain | 6.36e-18 | 39 |
future forebrain | 6.36e-18 | 39 |
brain grey matter | 2.63e-17 | 29 |
regional part of telencephalon | 2.63e-17 | 29 |
telencephalon | 2.63e-17 | 29 |
structure with developmental contribution from neural crest | 1.48e-15 | 92 |
cerebral cortex | 3.24e-13 | 21 |
cerebral hemisphere | 3.24e-13 | 21 |
pallium | 3.24e-13 | 21 |
regional part of cerebral cortex | 9.34e-11 | 17 |
occipital lobe | 9.64e-08 | 10 |
visual cortex | 9.64e-08 | 10 |
neocortex | 9.64e-08 | 10 |
tissue | 8.64e-07 | 349 |