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FFCP PHASE1:Mm9::chr6:4853298..4853346,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=243725
|EntrezGene=243725
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q7TN74
|UniProt=Q7TN74
|association_with_transcript=0bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end
|association_with_transcript=0bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end
|cluster_id=chr6:4853298..4853346,+
|description=CAGE_peak_2_at_Ppp1r9a_5end
|description=CAGE_peak_2_at_Ppp1r9a_5end
|id=chr6:4853298..4853346,+
|id=chr6:4853298..4853346,+
|ontology_enrichment_celltype=CL:0000117!1.98e-08!23;CL:0000337!1.98e-08!23
|ontology_enrichment_celltype=CL:0000117!1.98e-08!23;CL:0000337!1.98e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.70e-09,23;CL:0000337,4.70e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.79e-20!71;UBERON:0003075!8.79e-20!71;UBERON:0007284!8.79e-20!71;UBERON:0001049!9.23e-18!52;UBERON:0005068!9.23e-18!52;UBERON:0006241!9.23e-18!52;UBERON:0007135!9.23e-18!52;UBERON:0000033!3.89e-17!63;UBERON:0000955!4.85e-17!50;UBERON:0006238!4.85e-17!50;UBERON:0002616!2.03e-16!49;UBERON:0001017!4.95e-16!73;UBERON:0005743!4.95e-16!73;UBERON:0003056!9.66e-16!49;UBERON:0000073!4.39e-15!75;UBERON:0001016!4.39e-15!75;UBERON:0004121!4.54e-15!102;UBERON:0000924!4.54e-15!102;UBERON:0006601!4.54e-15!102;UBERON:0002020!5.85e-14!34;UBERON:0003080!7.12e-14!40;UBERON:0002780!2.67e-13!39;UBERON:0001890!2.67e-13!39;UBERON:0006240!2.67e-13!39;UBERON:0002791!1.57e-11!29;UBERON:0003528!1.57e-11!29;UBERON:0001893!1.57e-11!29;UBERON:0000468!2.75e-08!333;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21;UBERON:0002619!2.02e-07!17;UBERON:0000153!4.08e-07!94;UBERON:0000025!8.78e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.96e-20,54;UBERON:0002346,3.27e-19,64;UBERON:0003075,3.27e-19,64;UBERON:0007284,3.27e-19,64;UBERON:0001049,1.48e-18,52;UBERON:0005068,1.48e-18,52;UBERON:0006241,1.48e-18,52;UBERON:0007135,1.48e-18,52;UBERON:0003056,1.47e-16,49;UBERON:0001017,6.84e-16,73;UBERON:0000955,6.98e-16,47;UBERON:0006238,6.98e-16,47;UBERON:0002616,3.12e-15,46;UBERON:0001016,9.86e-15,75;UBERON:0010371,1.30e-14,73;UBERON:0002020,1.44e-14,34;UBERON:0003080,1.64e-14,40;UBERON:0002780,6.83e-14,39;UBERON:0001890,6.83e-14,39;UBERON:0006240,6.83e-14,39;UBERON:0010314,4.46e-13,92;UBERON:0004121,1.27e-12,95;UBERON:0000924,1.27e-12,95;UBERON:0006601,1.27e-12,95;UBERON:0003528,6.15e-12,29;UBERON:0002791,6.15e-12,29;UBERON:0001893,6.15e-12,29;UBERON:0002021,1.20e-08,10;UBERON:0000411,1.20e-08,10;UBERON:0001950,1.20e-08,10;UBERON:0000956,1.28e-07,21;UBERON:0001869,1.28e-07,21;UBERON:0000203,1.28e-07,21;UBERON:0002619,1.83e-07,17
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0.42438965179803,7.65389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0,0,0.872100625521786,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,0,5.46254444320914,6.34789175126439,2.53532561402472,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0,2.07379224616955,1.21505344498522,1.68259969081106,4.57041575046086,5.96345060569357,3.55223317723367,2.30029130443767,1.83843757322004,9.91042928994498,14.300981865541,12.7493422602682,4.48413378282659,5.12330804173494,7.8137005583514,8.37548997004143,11.8180148106653,10.8486755921535,9.42811473515737,7.97281412474976,10.4383689662168,0.454357159999104,0.151143120213571,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,1.25602267690966,0,2.67195850316685,3.12273588179045,1.52232739156071,2.53677046981664,2.41156224884196,3.99801604261396,2.38766523526383,0.988779870937496,1.01219549843938,0,3.72063754879041,1.10420759230197,0,0,9.9545470983926,7.33063473847093,0,0.239630249011841,0,0,12.5824137100051,62.2200819833332,17.4659549436882,43.9775530086459,52.6773842100481,15.7918913865266,32.9349764027548,3.05518091550949,0.746441823660558,0.252722758433675,1.47309299120532,1.95180664444056,1.60931473103431,3.42118046630164,3.91832526372859,6.46346741937615,4.48398020996974,5.05989312622536,5.43277078551933,1.07783996466421,3.78212160335639,4.39877810409872,2.6303487891309,5.00485048606076,2.43776516565517,2.88094990971121,5.57295947091781,0,0.257347907114715,0,1.24275463521301,2.11073453982987,1.44049649168812,0.710234206755631,1.96764231747404,1.3884040159864,0.465067889500816,1.87791380979733,0.817357396570186,1.81015834904829,1.31333971263276,0.810688095458557,0.877199924551994,0.439100230582101,0.671032093801859,29.2303028504137,9.2614151141356,0,0,3.41261200856374,2.32236671860439,1.9330119198314,2.01683524623343,0.667134131534611,0.760902504450237,0,0.658795818896044,1.00534083520108,1.39269530428806,0.779856348476481,0,0,0.199141273254367,0.758671603812327,1.37098215131675,1.1270773567308,2.44381593414377,1.55161989734101,2.73529697572242,1.70738650235495,0.738050739898011,0.784993639206874,0.863780147452604,0.296452627087149,0.333690211432188,1.96558995113203,0.224862112384854,0,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,0,2.87536413054709,1.48856379067401,0.312037673114561,1.01031551178845,1.07638448113147,0,1.84753190166605,1.51593129416388,1.95557971730431,1.35796068620151,2.11221223459652,2.34508760418542,1.90434912708811,1.56106918286239,3.78324345854858,3.10050565508285,2.71073106717728,2.45794972073607,1.72684981865896,1.59113964439663,0,0,0,0.827810238914197,10.2752377592187,12.1900154055891,0,0.757412781613119,0.94652465824877,0.390438744296638,1.93881057959519,1.43381278771531,1.78238939265915,2.83076530788832,2.02405350837447,0.292255857911312,0.790575555893047,16.0660658210904,3.54850213020672,1.6025904330053,5.53815661802159,2.47455184458803,0,1.45668381692989,2.41858845571801,1.69744571780308,1.18120757152309,4.30409207121498,3.35956781118687,0.363533729477506,1.42598951353889,1.58018378967908,0,0,3.06395645178409,3.42116078659489,1.94038025674132,1.50035924522115,3.01478397191865,3.21063871683727,2.79733335023606,2.43571959291679,0.23467170806371,1.48282449604674,0.882113592219848,0.16488625294148,1.45317984026315,0.965006798850494,0.477489376012546,0.492422699235184,0.291480836629851,10.198391610578,0,1.857481811669,1.85194527369712,0.565105371014073,0.410082683163076,0,1.01987057996313,2.37917468950219,0.552799895217695,0.954670618015114,1.89801596148681,1.82987520414164,1.51207477150522,1.04544148007234,0.218362563746178,2.02296519577231,2.14898984885873,0.785267825952089,0.648074866458964,0,3.94585057078933,5.38259565758324,2.48187735685646,5.25018208528929,3.35815541042101,4.56181538825101,6.33729088687071,7.68205870579306,13.1074180532139,9.18019659138823,5.18454011264158,0.632022241256357,1.41907650703115,1.43795340030758,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.35232715822533,0.93841237725591,1.46521299413812,0,0,29.9318476587045,36.365693684067,31.5092532391668,34.0269301040501,43.1601987455505,42.3020582538232,37.8012600129811,31.0721630224712,43.5016712624836,46.080667745912,0.415149390336707,5.58634822761443,3.24393850932855,4.61902762429759,1.67690530102386,2.75765262675021,3.11145418922261,3.29656091582231,3.20919209591815,3.28506375292937,2.28131369901216,5.28153755881013,3.27745276144588,3.90553429669703,4.07791829584854,2.85776214769844,4.51948871184936,5.20854895252004,4.94503080963968,3.67997300335993,3.08582327146874,4.2594193478241,5.96090474868302,4.79643174886684,4.51725025993587,3.89227196301712,4.75612729469209,3.15683653725411,3.80251518768413,3.92799590160417,5.81311588808453,4.82671963640261,3.27384834535751,4.02835787083512,5.40138510747196,2.74791635731741,3.74290573512653,2.79332370262788,4.20834330551455,1.76473135295612,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0.42438965179803,7.65389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0,0,0.872100625521786,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,0,5.46254444320914,6.34789175126439,2.53532561402472,0,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0,2.07379224616955,1.21505344498522,1.68259969081106,4.57041575046086,5.96345060569357,3.55223317723367,2.30029130443767,1.83843757322004,9.91042928994498,14.300981865541,12.7493422602682,4.48413378282659,5.12330804173494,7.8137005583514,8.37548997004143,11.8180148106653,10.8486755921535,9.42811473515737,7.97281412474976,10.4383689662168,0.454357159999104,0.151143120213571,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,1.25602267690966,0,2.67195850316685,3.12273588179045,1.52232739156071,2.53677046981664,2.41156224884196,3.99801604261396,2.38766523526383,0.988779870937496,1.01219549843938,0,3.72063754879041,1.10420759230197,0,0,9.9545470983926,7.33063473847093,0,0.239630249011841,0,0,12.5824137100051,62.2200819833332,17.4659549436882,43.9775530086459,52.6773842100481,15.7918913865266,32.9349764027548,3.05518091550949,0.746441823660558,0.252722758433675,1.47309299120532,1.95180664444056,1.60931473103431,3.42118046630164,3.91832526372859,6.46346741937615,4.48398020996974,5.05989312622536,5.43277078551933,1.07783996466421,3.78212160335639,4.39877810409872,2.6303487891309,5.00485048606076,2.43776516565517,2.88094990971121,5.57295947091781,0,0.257347907114715,0,1.24275463521301,2.11073453982987,1.44049649168812,0.710234206755631,1.96764231747404,1.3884040159864,0.465067889500816,1.87791380979733,0.817357396570186,1.81015834904829,1.31333971263276,0.810688095458557,0.877199924551994,0.439100230582101,0.671032093801859,29.2303028504137,9.2614151141356,0,0,3.41261200856374,2.32236671860439,1.9330119198314,2.01683524623343,0.667134131534611,0.760902504450237,0,0.658795818896044,1.00534083520108,1.39269530428806,0.779856348476481,0,0,0.199141273254367,0.758671603812327,1.37098215131675,1.1270773567308,2.44381593414377,1.55161989734101,2.73529697572242,1.70738650235495,0.738050739898011,0.784993639206874,0.863780147452604,0.296452627087149,0.333690211432188,1.96558995113203,0.224862112384854,0,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,0,2.87536413054709,1.48856379067401,0.312037673114561,1.01031551178845,1.07638448113147,0,1.84753190166605,1.51593129416388,1.95557971730431,1.35796068620151,2.11221223459652,2.34508760418542,1.90434912708811,1.56106918286239,3.78324345854858,3.10050565508285,2.71073106717728,2.45794972073607,1.72684981865896,1.59113964439663,0,0,0,0.827810238914197,10.2752377592187,12.1900154055891,0,0.757412781613119,0.94652465824877,0.390438744296638,1.93881057959519,1.43381278771531,1.78238939265915,2.83076530788832,2.02405350837447,0.292255857911312,0.790575555893047,16.0660658210904,3.54850213020672,1.6025904330053,5.53815661802159,2.47455184458803,0,1.45668381692989,2.41858845571801,1.69744571780308,1.18120757152309,4.30409207121498,3.35956781118687,0.363533729477506,1.42598951353889,1.58018378967908,0,0,3.06395645178409,3.42116078659489,1.94038025674132,1.50035924522115,3.01478397191865,3.21063871683727,2.79733335023606,2.43571959291679,0.23467170806371,1.48282449604674,0.882113592219848,0.16488625294148,1.45317984026315,0.965006798850494,0.477489376012546,0.492422699235184,0.291480836629851,10.198391610578,0,1.857481811669,1.85194527369712,0.565105371014073,0.410082683163076,0,1.01987057996313,2.37917468950219,0.552799895217695,0.954670618015114,1.89801596148681,1.82987520414164,1.51207477150522,1.04544148007234,0.218362563746178,2.02296519577231,2.14898984885873,0.785267825952089,0.648074866458964,0,3.94585057078933,5.38259565758324,2.48187735685646,5.25018208528929,3.35815541042101,4.56181538825101,6.33729088687071,7.68205870579306,13.1074180532139,9.18019659138823,5.18454011264158,0.632022241256357,1.41907650703115,1.43795340030758,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,1.35232715822533,0.93841237725591,1.46521299413812,0,0,29.9318476587045,36.365693684067,31.5092532391668,34.0269301040501,43.1601987455505,42.3020582538232,37.8012600129811,31.0721630224712,43.5016712624836,46.080667745912,0.415149390336707,5.58634822761443,3.24393850932855,4.61902762429759,1.67690530102386,2.75765262675021,3.11145418922261,3.29656091582231,3.20919209591815,3.28506375292937,2.28131369901216,5.28153755881013,3.27745276144588,3.90553429669703,4.07791829584854,2.85776214769844,4.51948871184936,5.20854895252004,4.94503080963968,3.679973003359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|short_description=p2@Ppp1r9a
|short_description=p2@Ppp1r9a
}}
}}

Latest revision as of 07:22, 27 September 2015

Short description:p2@Ppp1r9a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ppp1r9a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000035813, NM_181595, uc009avy.1, uc009avz.1_5end
EntrezGene:Ppp1r9a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ppp1r9a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D862.22
corpus striatum, neonate N00.CNhs11226.630-43F117.47
cortex, adult.CNhs10473.12-14D543.98
cortex, neonate N30.CNhs11107.1392-42F252.68
diencephalon, adult.CNhs10482.20-12F215.79
diencephalon, neonate N30.CNhs11201.1388-42B232.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G85.06
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E829.23
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A312.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B76.34
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D913.11
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.08
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.70e-0923
neuroblast (sensu Vertebrata)4.70e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.96e-2054
neurectoderm3.27e-1964
neural plate3.27e-1964
presumptive neural plate3.27e-1964
neural tube1.48e-1852
neural rod1.48e-1852
future spinal cord1.48e-1852
neural keel1.48e-1852
pre-chordal neural plate1.47e-1649
central nervous system6.84e-1673
brain6.98e-1647
future brain6.98e-1647
regional part of brain3.12e-1546
nervous system9.86e-1575
ecto-epithelium1.30e-1473
gray matter1.44e-1434
anterior neural tube1.64e-1440
regional part of forebrain6.83e-1439
forebrain6.83e-1439
future forebrain6.83e-1439
structure with developmental contribution from neural crest4.46e-1392
ectoderm-derived structure1.27e-1295
ectoderm1.27e-1295
presumptive ectoderm1.27e-1295
brain grey matter6.15e-1229
regional part of telencephalon6.15e-1229
telencephalon6.15e-1229
occipital lobe1.20e-0810
visual cortex1.20e-0810
neocortex1.20e-0810
cerebral cortex1.28e-0721
cerebral hemisphere1.28e-0721
pallium1.28e-0721
regional part of cerebral cortex1.83e-0717
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