Personal tools

FFCP PHASE1:Mm9::chr6:4852913..4853014,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr6:4852913..4853014,+ |short_description=p1@Ppp1r9a |description=CAGE_peak_1_at_Ppp1r9a_5end |association_with_transcript=0bp_to_ENSMUST00000168998,uc009avx.1...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:4852913..4853014,+
|DHSsupport=NA
|short_description=p1@Ppp1r9a
|DPIdataset=NA
|description=CAGE_peak_1_at_Ppp1r9a_5end
|association_with_transcript=0bp_to_ENSMUST00000168998,uc009avx.1_5end
|EntrezGene=243725
|EntrezGene=243725
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3UXW4,Q7TN74
|UniProt=Q3UXW4,Q7TN74
|association_with_transcript=0bp_to_ENSMUST00000168998,uc009avx.1_5end
|cluster_id=chr6:4852913..4853014,+
|description=CAGE_peak_1_at_Ppp1r9a_5end
|id=chr6:4852913..4853014,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.68e-11!333;UBERON:0000922!1.13e-09!328;UBERON:0000033!1.57e-09!63;UBERON:0002346!3.45e-09!71;UBERON:0003075!3.45e-09!71;UBERON:0007284!3.45e-09!71;UBERON:0000025!6.95e-09!114;UBERON:0004111!1.08e-08!122;UBERON:0003056!4.34e-08!49;UBERON:0002021!8.72e-07!10;UBERON:0000411!8.72e-07!10;UBERON:0001950!8.72e-07!10;UBERON:0000955!9.27e-07!50;UBERON:0006238!9.27e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.48e-12,92;UBERON:0000025,1.05e-08,114;UBERON:0004111,1.61e-08,122;UBERON:0003056,4.13e-08,49;UBERON:0002346,1.08e-07,64;UBERON:0003075,1.08e-07,64;UBERON:0007284,1.08e-07,64;UBERON:0002021,8.38e-07,10;UBERON:0000411,8.38e-07,10;UBERON:0001950,8.38e-07,10;UBERON:0000922,8.95e-07,320
|phase1_expression=10.4096750618116,1.04692622291808,0.454999239389536,1.20985684522732,0.500895729946347,3.69334398206158,7.00837921786577,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,9.09963204616447,0,0,4.15980299262857,4.81759490241057,0,1.29228598847722,1.72376986148711,8.17100703662408,7.30887376303799,3.99114919179548,0,0,0,11.554064790051,9.30914014007557,14.4960242946282,0,0,0,0,0,0.485510353031154,1.25896817975577,0.912392380975631,0.550640256485045,0.782391344348039,2.39827672018491,1.75748946187577,2.13872888981712,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,1.71920063963254,2.06268836910977,4.04632921719196,4.7609188134483,8.87363964908651,0.677689064138264,0,0.899899717281399,1.97773272513395,1.4209602298922,1.19840044207362,0.768436610643109,9.02099627083756,4.3201900266141,6.52007380189284,3.71346279724945,3.75476519617743,8.69684674426174,5.55903731905771,6.43453150627015,14.3150645299205,17.2377906415003,15.6678663921368,9.36392642884376,8.23388792421687,9.37644067002168,6.14202597803038,8.4414391504752,13.2934475565825,9.1334861496837,10.2507610175354,7.64237727883732,5.2251073399897,5.7434385681157,15.6526823898906,1.72084775396277,0,1.61910957491345,1.94932925234301,0.896053774194671,3.7919993435573,0,0,0,17.7462708918617,0,0,0,3.030874574157,4.30711771307668,3.53867111510348,3.53970027129086,1.8125651855302,23.4538579722423,13.3583701609925,15.5277393939192,15.912469310668,16.5794904607885,21.0483785772912,12.6923257242972,8.15743393523434,14.4599356919912,0.884610551949874,9.54424414689714,2.87093973998512,2.42437626567611,11.1835056730873,24.8863677459815,19.6879904404648,7.40825460104915,5.03223522924865,2.39961092397363,1.65191295194984,19.472783122627,31.1100409916666,12.4397808591736,32.8527965163402,29.407277592988,19.7398642331582,25.3096370385702,12.220723662038,6.22034853050465,10.108910337347,19.3606507415556,22.1204753036596,11.9549094305406,17.8261508507296,21.5507889505073,20.0707672496417,25.4946303366851,19.3962569838639,13.1938719076898,7.11374376678379,14.5611681729221,9.14945845652534,5.91828477554452,11.1218899690239,10.0993128291428,6.58502836505419,19.3063238813938,0.702213187313235,0.51469581422943,0.852490498186778,22.3695834338342,22.5145017581852,16.9258337773354,26.988899856714,23.4149435779411,22.9857998202194,27.2064715357977,15.2915838797783,19.1495161482158,17.7724637906559,20.8492679380451,13.8627664323413,16.0819986167866,14.2707574939183,10.468100663309,24.3936340334388,15.3327872445134,1.98251269790279,5.55346189993443,23.4617075588757,19.5078804362768,15.9795652039396,12.9077455758939,12.4531704553127,8.94060442729028,6.64340686162316,4.77626968699632,9.0480675168097,9.54991065797524,9.35827618171777,7.19055526923377,12.1037307929829,7.56736838366595,5.12103332573321,19.7649926814831,16.9061603509621,28.7148372261893,19.5892012039302,16.9027325935668,17.6429938576678,14.3181843540214,14.9148791449306,7.52722699922983,1.48226313543574,11.0117769772622,9.43483176543374,8.09503604585473,6.8972441272091,10.1294407096015,8.40265310878685,11.5078454980324,13.4572238223279,10.158772287959,35.9420516318386,17.1184835927512,16.8500343481863,7.07220858251913,8.43167843552987,2.8946611281802,16.6277871149944,11.5589761179996,19.066902243717,20.8786455503481,24.4077858220042,33.3337452309213,28.8032805472077,15.2204245329083,26.4827042098401,25.0255099303116,25.3533082165404,18.0249646187312,16.0597033135283,16.7792907954553,4.52373851817817,0,2.45882136509518,9.65778612066564,17.1789131286937,18.2850231083837,0,2.52470927204373,10.0962630213202,13.2749173060857,14.2179442503647,14.5770966751057,17.8238939265915,13.0215204162863,13.3587531552715,16.6585839009448,17.7879500075936,18.9579576688866,27.9621967860289,10.1497394090335,11.7278610734575,18.6416238958965,5.30980553359851,17.7229864393136,16.6277956330613,11.8821200246216,7.38254732201932,18.4461088766356,10.3371317267288,19.2672876623078,23.8853243517763,18.0140952023415,6.32511651449993,12.3762651897824,23.4903327970114,20.5269647195694,6.59729287292048,14.3605813471167,22.5222096725687,17.3017753074008,13.8221177305782,3.34911444026059,2.81606049676452,8.26145076368899,3.08739757276947,0.65954501176592,5.32832608096488,5.1869115438214,2.626191568069,2.62625439592098,10.2018292820448,18.7279555030615,1.87957968877638,8.66824845445534,10.926477114813,3.76736914009382,1.50363650493128,1.83022538565218,10.3686842296252,11.6159705428636,11.6087977995716,1.90934123603023,15.1841276918945,20.9419051140654,15.768779759983,12.3362094648537,12.4466661335321,10.9240120571705,13.6378201946804,9.6849698534091,11.6653475962614,18.0188400795208,1.69107881605257,19.5866675317612,11.4166358415397,16.139448632556,14.8533796999391,20.9505595608565,23.1193760132135,25.7804681991021,31.4578033277133,10.8712854371703,6.33666013767304,0.632022241256357,2.02725215290164,4.5192821152524,0.909445760844565,1.79026695667481,0.79472541912506,0.961563596159751,0.590758108698309,0.908698049533329,1.5241361331,1.00826185136841,0.779663045918019,1.05833025804362,0.467507608726276,5.66825959038028,2.66383144048878,5.02397597013064,2.01461539636894,14.1028403643499,4.129014459926,17.5825559296574,4.28736758158132,6.01886524842436,22.0253218620656,23.0162618253588,23.4887160510153,22.5127668870231,27.4033007908257,21.1510291269116,24.9758325085768,24.7676661773321,33.5325382648311,21.2281727818246,5.70830411712972,12.768795948833,10.0732827394939,11.4260157022098,5.24032906569956,6.43452279575049,14.446037307105,17.1009097508282,15.7250412699989,12.1294661646623,15.4622372933046,17.9195024316772,15.2635657175908,16.5184893204563,14.1291253630809,13.3362233559261,15.1808466987761,13.3107362119956,16.4834360321323,15.7502844543805,14.7433778525729,14.5530161050657,13.5908628269973,17.4415699958794,14.7751727252069,14.4690979494767,14.451309856949,17.8887403777733,14.6668442953531,15.1508413347589,13.5243920661559,14.7756723563345,15.1415485972785,12.0850736125053,13.3105561576988,12.2407183189594,10.5269223800434,7.73535794573874,8.22539827896026,7.72069966918304,8.57910991795559
|phase1_expression=10.4096750618116,1.04692622291808,0.454999239389536,1.20985684522732,0.500895729946347,3.69334398206158,7.00837921786577,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,9.09963204616447,0,0,4.15980299262857,4.81759490241057,0,1.29228598847722,1.72376986148711,8.17100703662408,7.30887376303799,3.99114919179548,0,0,0,11.554064790051,9.30914014007557,14.4960242946282,0,0,0,0,0,0.485510353031154,1.25896817975577,0.912392380975631,0.550640256485045,0.782391344348039,2.39827672018491,1.75748946187577,2.13872888981712,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,1.71920063963254,2.06268836910977,4.04632921719196,4.7609188134483,8.87363964908651,0.677689064138264,0,0.899899717281399,1.97773272513395,1.4209602298922,1.19840044207362,0.768436610643109,9.02099627083756,4.3201900266141,6.52007380189284,3.71346279724945,3.75476519617743,8.69684674426174,5.55903731905771,6.43453150627015,14.3150645299205,17.2377906415003,15.6678663921368,9.36392642884376,8.23388792421687,9.37644067002168,6.14202597803038,8.4414391504752,13.2934475565825,9.1334861496837,10.2507610175354,7.64237727883732,5.2251073399897,5.7434385681157,15.6526823898906,1.72084775396277,0,1.61910957491345,1.94932925234301,0.896053774194671,3.7919993435573,0,0,0,17.7462708918617,0,0,0,3.030874574157,4.30711771307668,3.53867111510348,3.53970027129086,1.8125651855302,23.4538579722423,13.3583701609925,15.5277393939192,15.912469310668,16.5794904607885,21.0483785772912,12.6923257242972,8.15743393523434,14.4599356919912,0.884610551949874,9.54424414689714,2.87093973998512,2.42437626567611,11.1835056730873,24.8863677459815,19.6879904404648,7.40825460104915,5.03223522924865,2.39961092397363,1.65191295194984,19.472783122627,31.1100409916666,12.4397808591736,32.8527965163402,29.407277592988,19.7398642331582,25.3096370385702,12.220723662038,6.22034853050465,10.108910337347,19.3606507415556,22.1204753036596,11.9549094305406,17.8261508507296,21.5507889505073,20.0707672496417,25.4946303366851,19.3962569838639,13.1938719076898,7.11374376678379,14.5611681729221,9.14945845652534,5.91828477554452,11.1218899690239,10.0993128291428,6.58502836505419,19.3063238813938,0.702213187313235,0.51469581422943,0.852490498186778,22.3695834338342,22.5145017581852,16.9258337773354,26.988899856714,23.4149435779411,22.9857998202194,27.2064715357977,15.2915838797783,19.1495161482158,17.7724637906559,20.8492679380451,13.8627664323413,16.0819986167866,14.2707574939183,10.468100663309,24.3936340334388,15.3327872445134,1.98251269790279,5.55346189993443,23.4617075588757,19.5078804362768,15.9795652039396,12.9077455758939,12.4531704553127,8.94060442729028,6.64340686162316,4.77626968699632,9.0480675168097,9.54991065797524,9.35827618171777,7.19055526923377,12.1037307929829,7.56736838366595,5.12103332573321,19.7649926814831,16.9061603509621,28.7148372261893,19.5892012039302,16.9027325935668,17.6429938576678,14.3181843540214,14.9148791449306,7.52722699922983,1.48226313543574,11.0117769772622,9.43483176543374,8.09503604585473,6.8972441272091,10.1294407096015,8.40265310878685,11.5078454980324,13.4572238223279,10.158772287959,35.9420516318386,17.1184835927512,16.8500343481863,7.07220858251913,8.43167843552987,2.8946611281802,16.6277871149944,11.5589761179996,19.066902243717,20.8786455503481,24.4077858220042,33.3337452309213,28.8032805472077,15.2204245329083,26.4827042098401,25.0255099303116,25.3533082165404,18.0249646187312,16.0597033135283,16.7792907954553,4.52373851817817,0,2.45882136509518,9.65778612066564,17.1789131286937,18.2850231083837,0,2.52470927204373,10.0962630213202,13.2749173060857,14.2179442503647,14.5770966751057,17.8238939265915,13.0215204162863,13.3587531552715,16.6585839009448,17.7879500075936,18.9579576688866,27.9621967860289,10.1497394090335,11.7278610734575,18.6416238958965,5.30980553359851,17.7229864393136,16.6277956330613,11.8821200246216,7.38254732201932,18.4461088766356,10.3371317267288,19.2672876623078,23.8853243517763,18.0140952023415,6.32511651449993,12.3762651897824,23.4903327970114,20.5269647195694,6.59729287292048,14.3605813471167,22.5222096725687,17.3017753074008,13.8221177305782,3.34911444026059,2.81606049676452,8.26145076368899,3.08739757276947,0.65954501176592,5.32832608096488,5.1869115438214,2.626191568069,2.62625439592098,10.2018292820448,18.7279555030615,1.87957968877638,8.66824845445534,10.926477114813,3.76736914009382,1.50363650493128,1.83022538565218,10.3686842296252,11.6159705428636,11.6087977995716,1.90934123603023,15.1841276918945,20.9419051140654,15.768779759983,12.3362094648537,12.4466661335321,10.9240120571705,13.6378201946804,9.6849698534091,11.6653475962614,18.0188400795208,1.69107881605257,19.5866675317612,11.4166358415397,16.139448632556,14.8533796999391,20.9505595608565,23.1193760132135,25.7804681991021,31.4578033277133,10.8712854371703,6.33666013767304,0.632022241256357,2.02725215290164,4.5192821152524,0.909445760844565,1.79026695667481,0.79472541912506,0.961563596159751,0.590758108698309,0.908698049533329,1.5241361331,1.00826185136841,0.779663045918019,1.05833025804362,0.467507608726276,5.66825959038028,2.66383144048878,5.02397597013064,2.01461539636894,14.1028403643499,4.129014459926,17.5825559296574,4.28736758158132,6.01886524842436,22.0253218620656,23.0162618253588,23.4887160510153,22.5127668870231,27.4033007908257,21.1510291269116,24.9758325085768,24.7676661773321,33.5325382648311,21.2281727818246,5.70830411712972,12.768795948833,10.0732827394939,11.4260157022098,5.24032906569956,6.43452279575049,14.446037307105,17.1009097508282,15.7250412699989,12.1294661646623,15.4622372933046,17.9195024316772,15.2635657175908,16.5184893204563,14.1291253630809,13.3362233559261,15.1808466987761,13.3107362119956,16.4834360321323,15.7502844543805,14.7433778525729,14.5530161050657,13.5908628269973,17.4415699958794,14.7751727252069,14.4690979494767,14.451309856949,17.8887403777733,14.6668442953531,15.1508413347589,13.5243920661559,14.7756723563345,15.1415485972785,12.0850736125053,13.3105561576988,12.2407183189594,10.5269223800434,7.73535794573874,8.22539827896026,7.72069966918304,8.57910991795559
|short_description=p1@Ppp1r9a
}}
}}

Latest revision as of 07:22, 27 September 2015

Short description:p1@Ppp1r9a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppp1r9a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000168998, uc009avx.1_5end
EntrezGene:Ppp1r9a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppp1r9a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D723.45
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D615.53
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F516.58
adrenal gland, neonate N00.CNhs11191.1311-23C121.05
adrenal gland, neonate N25.CNhs11223.1377-27I312.69
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H114.46
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B224.89
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A419.47
corpus striatum, adult.CNhs10487.19-21D831.11
corpus striatum, neonate N00.CNhs11226.630-43F112.44
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F229.41
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B225.31
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G419.36
eyeball, embryo E12.CNhs11016.345-16C622.12
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D421.55
eyeball, neonate N00.CNhs11207.633-15C620.07
eyeball, neonate N01.CNhs11140.1532-43E725.49
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H214.56
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I619.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E922.37
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D426.99
heart, embryo E15.CNhs11017.431-16C823.41
heart, embryo E16.CNhs11021.457-17C622.99
heart, embryo E17.CNhs11025.479-18E527.21
heart, embryo E18.CNhs11030.1283-20G315.29
heart, neonate N00.CNhs11213.639-21E319.15
heart, neonate N03.CNhs11221.1349-25I217.77
heart, neonate N10.CNhs11118.749-24G120.85
heart, neonate N16.CNhs11209.782-15G113.86
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D314.27
heart, neonate N30.CNhs11202.1390-42D210.47
hippocampus, adult.CNhs10478.13-16E824.39
hippocampus, neonate N00.CNhs11228.627-43G115.33
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I523.46
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D815.98
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E312.10
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F819.76
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I228.71
kidney, embryo E18.CNhs11001.1288-20C719.59
kidney, neonate N00.CNhs11214.646-21G716.90
kidney, neonate N10.CNhs11206.758-6D517.64
kidney, neonate N20.CNhs11113.832-19I114.32
kidney, neonate N25.CNhs11122.1353-25F314.91
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F811.01
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F413.46
liver, neonate N03.CNhs11123.1345-25G210.16
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H217.12
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H18.43
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B116.63
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F819.07
lung, embryo E15.CNhs11020.432-17C520.88
lung, embryo E16.CNhs10998.458-17B624.41
lung, embryo E17.CNhs10605.480-44A633.33
lung, embryo E18.CNhs10583.1287-20I628.80
lung, neonate N00.CNhs11224.640-42C615.22
lung, neonate N06.CNhs11212.683-20E526.48
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E625.35
lung, neonate N20.CNhs11109.822-18A418.02
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H216.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C217.18
medulla oblongata, neonate N30.CNhs11200.1396-42A318.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I727.96
ovary, embryo E18.CNhs11040.505-44H710.15
ovary, neonate N00.CNhs11217.1299-22I411.73
oviduct, adult pregnant day01.CNhs10500.988-6G618.64
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F216.63
pancreas, embryo E16.CNhs11003.460-26E511.88
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I718.45
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D823.89
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G823.49
pituitary gland, embryo E12.CNhs11018.346-16E620.53
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B922.52
pituitary gland, embryo E16.CNhs11036.449-43F617.30
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F210.93
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.61
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E315.18
stomach, embryo E15.CNhs10603.1252-16G820.94
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A913.64
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I111.67
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F519.59
testis, embryo E15.CNhs11034.443-27C511.42
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I514.85
testis, embryo E18.CNhs11027.503-18G520.95
testis, neonate N00.CNhs11189.1300-22B723.12
testis, neonate N07.CNhs11222.726-26I425.78
testis, neonate N10.CNhs11204.763-44D931.46
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E517.58
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D211.43
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.48e-1292
tube1.05e-08114
anatomical conduit1.61e-08122
pre-chordal neural plate4.13e-0849
neurectoderm1.08e-0764
neural plate1.08e-0764
presumptive neural plate1.08e-0764
occipital lobe8.38e-0710
visual cortex8.38e-0710
neocortex8.38e-0710
embryo8.95e-07320
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:4852913..4853014,%2B&oldid=4299078"