FFCP PHASE1:Mm9::chr18:43847284..43847309,-: Difference between revisions
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{{FFCP|EntrezGene=76217|HGNC=|MCL_coexpression_id=1|UniProt=D3YXK0|association_with_transcript=117bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end|description=CAGE_peak_3_at_Jakmip2_5end|id=chr18:43847284..43847309,-|ontology_enrichment_celltype=CL:0000540!3.05e-15!33;CL:0000047!3.05e-15!33;CL:0000031!3.05e-15!33;CL:0000404!3.05e-15!33;CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000221!8.21e-12!44;CL:0000133!8.21e-12!44;CL:0002319!1.30e-11!43;CL:0000393!5.79e-11!39;CL:0000211!5.79e-11!39;CL:0000055!3.03e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-15,23;CL:0000337,4.64e-15,23;CL:0000540,1.15e-12,33;CL:0000047,1.15e-12,33;CL:0000031,1.15e-12,33;CL:0000404,1.15e-12,33;CL:0000393,1.24e-09,39;CL:0000211,1.24e-09,39;CL:0002319,4.08e-08,43;CL:0000221,8.77e-08,44;CL:0000133,8.77e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.18e-29!75;UBERON:0001016!2.18e-29!75;UBERON:0001017!3.90e-29!73;UBERON:0005743!3.90e-29!73;UBERON:0004121!3.43e-26!102;UBERON:0000924!3.43e-26!102;UBERON:0006601!3.43e-26!102;UBERON:0002346!8.21e-26!71;UBERON:0003075!8.21e-26!71;UBERON:0007284!8.21e-26!71;UBERON:0001049!5.25e-24!52;UBERON:0005068!5.25e-24!52;UBERON:0006241!5.25e-24!52;UBERON:0007135!5.25e-24!52;UBERON:0000033!8.02e-24!63;UBERON:0000955!6.59e-23!50;UBERON:0006238!6.59e-23!50;UBERON:0002616!4.22e-22!49;UBERON:0003056!1.34e-20!49;UBERON:0002020!1.89e-20!34;UBERON:0003080!1.04e-17!40;UBERON:0002791!3.97e-17!29;UBERON:0003528!3.97e-17!29;UBERON:0001893!3.97e-17!29;UBERON:0002780!4.77e-17!39;UBERON:0001890!4.77e-17!39;UBERON:0006240!4.77e-17!39;UBERON:0000956!3.77e-12!21;UBERON:0001869!3.77e-12!21;UBERON:0000203!3.77e-12!21;UBERON:0007811!1.25e-11!86;UBERON:0000153!4.78e-11!94;UBERON:0002619!3.11e-10!17;UBERON:0002021!8.31e-10!10;UBERON:0000411!8.31e-10!10;UBERON:0001950!8.31e-10!10;UBERON:0003076!6.48e-07!12;UBERON:0003057!6.48e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.15e-27,64;UBERON:0003075,6.15e-27,64;UBERON:0007284,6.15e-27,64;UBERON:0001017,8.23e-27,73;UBERON:0000073,9.98e-27,54;UBERON:0001016,1.15e-25,75;UBERON:0002020,2.83e-25,34;UBERON:0001049,1.16e-24,52;UBERON:0005068,1.16e-24,52;UBERON:0006241,1.16e-24,52;UBERON:0007135,1.16e-24,52;UBERON:0010371,9.09e-22,73;UBERON:0004121,1.03e-21,95;UBERON:0000924,1.03e-21,95;UBERON:0006601,1.03e-21,95;UBERON:0003528,1.40e-20,29;UBERON:0002791,1.40e-20,29;UBERON:0001893,1.40e-20,29;UBERON:0000955,2.55e-20,47;UBERON:0006238,2.55e-20,47;UBERON:0002616,2.61e-19,46;UBERON:0003056,1.93e-17,49;UBERON:0003080,5.89e-17,40;UBERON:0002780,4.20e-16,39;UBERON:0001890,4.20e-16,39;UBERON:0006240,4.20e-16,39;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0010314,2.67e-14,92;UBERON:0002021,1.94e-13,10;UBERON:0000411,1.94e-13,10;UBERON:0001950,1.94e-13,10;UBERON:0002619,2.85e-13,17;UBERON:0003076,2.02e-08,12;UBERON:0003057,2.02e-08,12;UBERON:0002420,4.08e-07,8;UBERON:0007245,4.08e-07,8;UBERON:0010009,4.08e-07,8;UBERON:0010011,4.08e-07,8;UBERON:0000454,4.08e-07,8;UBERON:0002240,8.68e-07,6;UBERON:0005174,8.68e-07,6;UBERON:0001137,8.68e-07,6|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,0,2.07379224616955,0.945041568321835,1.68259969081106,1.42825492201902,3.09215957332259,3.1847607795888,2.20444583341944,0.919218786610021,5.50579404996943,5.36286819957788,4.6081959976873,2.76961204233407,3.56801810049398,7.29278718779464,0.279182999001381,4.50210088025344,4.5839474333043,5.00868595305235,10.1083893367363,5.59198337475902,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,5.5628351432194,5.65506108396329,0,0,0,0,4.04434726393021,8.23501085073528,16.9633375352367,9.73416193076748,15.3429274398198,5.40248915854856,8.11206315338788,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.689706313300419,1.0803727788321,2.26057226753573,1.2246569847239,1.7935920839879,1.40552586839593,0.517406741478031,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.62188789112922,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.80567915028033,0,0,1.26203287766503,1.17131623288992,1.29254038639679,0.477937595905104,0.668396022247182,0.849229592366497,1.21443210502468,0.876767573733936,0.790575555893047,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,14.7304075682297,17.1868654031819,10.3111909406213,15.7568979547248,12.0863023582352,14.8504950050997,9.45674526770863,13.1411298605419,12.9440077937955,0.726511433089237,1.19707462020309,0.853668028770671,1.45864030240976,1.67690530102386,0.735374033800057,2.889207461421,2.88449080134452,0.962757628775446,2.02157769411038,3.29523089857312,2.64076877940507,1.40462261204824,2.17685518176556,1.66562859971278,0.476293691283074,1.62238056322798,1.15745532278223,2.47251540481984,1.61918812147837,2.05721551431249,2.48466128623072,2.62279808942053,1.45346416632329,2.35273451038327,1.09998990259179,1.82927972872773,2.10455769150274,2.44447404922551,1.68342681497322,1.18635018124174,2.46261205938909,0.818462086339379,2.01417893541756,1.15743966588685,1.74867404556562,1.16965804222704,1.07435527024149,1.14772999241306,0.441182838239031,0.231867835620421|short_description=p3@Jakmip2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76217 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YXK0 | |||
|association_with_transcript=117bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end | |||
|cluster_id=chr18:43847284..43847309,- | |||
|description=CAGE_peak_3_at_Jakmip2_5end | |||
|id=chr18:43847284..43847309,- | |||
|ontology_enrichment_celltype=CL:0000540!3.05e-15!33;CL:0000047!3.05e-15!33;CL:0000031!3.05e-15!33;CL:0000404!3.05e-15!33;CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000221!8.21e-12!44;CL:0000133!8.21e-12!44;CL:0002319!1.30e-11!43;CL:0000393!5.79e-11!39;CL:0000211!5.79e-11!39;CL:0000055!3.03e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-15,23;CL:0000337,4.64e-15,23;CL:0000540,1.15e-12,33;CL:0000047,1.15e-12,33;CL:0000031,1.15e-12,33;CL:0000404,1.15e-12,33;CL:0000393,1.24e-09,39;CL:0000211,1.24e-09,39;CL:0002319,4.08e-08,43;CL:0000221,8.77e-08,44;CL:0000133,8.77e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.18e-29!75;UBERON:0001016!2.18e-29!75;UBERON:0001017!3.90e-29!73;UBERON:0005743!3.90e-29!73;UBERON:0004121!3.43e-26!102;UBERON:0000924!3.43e-26!102;UBERON:0006601!3.43e-26!102;UBERON:0002346!8.21e-26!71;UBERON:0003075!8.21e-26!71;UBERON:0007284!8.21e-26!71;UBERON:0001049!5.25e-24!52;UBERON:0005068!5.25e-24!52;UBERON:0006241!5.25e-24!52;UBERON:0007135!5.25e-24!52;UBERON:0000033!8.02e-24!63;UBERON:0000955!6.59e-23!50;UBERON:0006238!6.59e-23!50;UBERON:0002616!4.22e-22!49;UBERON:0003056!1.34e-20!49;UBERON:0002020!1.89e-20!34;UBERON:0003080!1.04e-17!40;UBERON:0002791!3.97e-17!29;UBERON:0003528!3.97e-17!29;UBERON:0001893!3.97e-17!29;UBERON:0002780!4.77e-17!39;UBERON:0001890!4.77e-17!39;UBERON:0006240!4.77e-17!39;UBERON:0000956!3.77e-12!21;UBERON:0001869!3.77e-12!21;UBERON:0000203!3.77e-12!21;UBERON:0007811!1.25e-11!86;UBERON:0000153!4.78e-11!94;UBERON:0002619!3.11e-10!17;UBERON:0002021!8.31e-10!10;UBERON:0000411!8.31e-10!10;UBERON:0001950!8.31e-10!10;UBERON:0003076!6.48e-07!12;UBERON:0003057!6.48e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.15e-27,64;UBERON:0003075,6.15e-27,64;UBERON:0007284,6.15e-27,64;UBERON:0001017,8.23e-27,73;UBERON:0000073,9.98e-27,54;UBERON:0001016,1.15e-25,75;UBERON:0002020,2.83e-25,34;UBERON:0001049,1.16e-24,52;UBERON:0005068,1.16e-24,52;UBERON:0006241,1.16e-24,52;UBERON:0007135,1.16e-24,52;UBERON:0010371,9.09e-22,73;UBERON:0004121,1.03e-21,95;UBERON:0000924,1.03e-21,95;UBERON:0006601,1.03e-21,95;UBERON:0003528,1.40e-20,29;UBERON:0002791,1.40e-20,29;UBERON:0001893,1.40e-20,29;UBERON:0000955,2.55e-20,47;UBERON:0006238,2.55e-20,47;UBERON:0002616,2.61e-19,46;UBERON:0003056,1.93e-17,49;UBERON:0003080,5.89e-17,40;UBERON:0002780,4.20e-16,39;UBERON:0001890,4.20e-16,39;UBERON:0006240,4.20e-16,39;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0010314,2.67e-14,92;UBERON:0002021,1.94e-13,10;UBERON:0000411,1.94e-13,10;UBERON:0001950,1.94e-13,10;UBERON:0002619,2.85e-13,17;UBERON:0003076,2.02e-08,12;UBERON:0003057,2.02e-08,12;UBERON:0002420,4.08e-07,8;UBERON:0007245,4.08e-07,8;UBERON:0010009,4.08e-07,8;UBERON:0010011,4.08e-07,8;UBERON:0000454,4.08e-07,8;UBERON:0002240,8.68e-07,6;UBERON:0005174,8.68e-07,6;UBERON:0001137,8.68e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,0,2.07379224616955,0.945041568321835,1.68259969081106,1.42825492201902,3.09215957332259,3.1847607795888,2.20444583341944,0.919218786610021,5.50579404996943,5.36286819957788,4.6081959976873,2.76961204233407,3.56801810049398,7.29278718779464,0.279182999001381,4.50210088025344,4.5839474333043,5.00868595305235,10.1083893367363,5.59198337475902,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,5.5628351432194,5.65506108396329,0,0,0,0,4.04434726393021,8.23501085073528,16.9633375352367,9.73416193076748,15.3429274398198,5.40248915854856,8.11206315338788,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.689706313300419,1.0803727788321,2.26057226753573,1.2246569847239,1.7935920839879,1.40552586839593,0.517406741478031,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.62188789112922,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.80567915028033,0,0,1.26203287766503,1.17131623288992,1.29254038639679,0.477937595905104,0.668396022247182,0.849229592366497,1.21443210502468,0.876767573733936,0.790575555893047,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,14.7304075682297,17.1868654031819,10.3111909406213,15.7568979547248,12.0863023582352,14.8504950050997,9.45674526770863,13.1411298605419,12.9440077937955,0.726511433089237,1.19707462020309,0.853668028770671,1.45864030240976,1.67690530102386,0.735374033800057,2.889207461421,2.88449080134452,0.962757628775446,2.02157769411038,3.29523089857312,2.64076877940507,1.40462261204824,2.17685518176556,1.66562859971278,0.476293691283074,1.62238056322798,1.15745532278223,2.47251540481984,1.61918812147837,2.05721551431249,2.48466128623072,2.62279808942053,1.45346416632329,2.35273451038327,1.09998990259179,1.82927972872773,2.10455769150274,2.44447404922551,1.68342681497322,1.18635018124174,2.46261205938909,0.818462086339379,2.01417893541756,1.15743966588685,1.74867404556562,1.16965804222704,1.07435527024149,1.14772999241306,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Jakmip2 | |||
}} |
Latest revision as of 07:17, 27 September 2015
Short description: | p3@Jakmip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jakmip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 117bp_to_ENSMUST00000082254, NM_001163637, uc008euk.2_5end |
EntrezGene: | Jakmip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.64e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.64e-15 | 23 |
neuron | 1.15e-12 | 33 |
neuronal stem cell | 1.15e-12 | 33 |
neuroblast | 1.15e-12 | 33 |
electrically signaling cell | 1.15e-12 | 33 |
electrically responsive cell | 1.24e-09 | 39 |
electrically active cell | 1.24e-09 | 39 |
neural cell | 4.08e-08 | 43 |
ectodermal cell | 8.77e-08 | 44 |
neurectodermal cell | 8.77e-08 | 44 |