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FFCP PHASE1:Mm9::chr6:48345690..48345712,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77827
|EntrezGene=77827
|HGNC=
|HGNC=
|MCL_coexpression_id=1946
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000127980_5end
|association_with_transcript=0bp_to_ENSMUST00000127980_5end
|cluster_id=chr6:48345690..48345712,+
|description=CAGE_peak_3_at_Krba1_5end
|description=CAGE_peak_3_at_Krba1_5end
|id=chr6:48345690..48345712,+
|id=chr6:48345690..48345712,+
|ontology_enrichment_celltype=CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000221!4.43e-07!44;CL:0000133!4.43e-07!44
|ontology_enrichment_celltype=CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000221!4.43e-07!44;CL:0000133!4.43e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,5.32e-09,33;CL:0000047,5.32e-09,33;CL:0000031,5.32e-09,33;CL:0000404,5.32e-09,33;CL:0000221,3.28e-07,44;CL:0000133,3.28e-07,44;CL:0002319,8.34e-07,43;CL:0000117,8.91e-07,23;CL:0000337,8.91e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.42e-18!71;UBERON:0003075!3.42e-18!71;UBERON:0007284!3.42e-18!71;UBERON:0000153!2.78e-16!94;UBERON:0001017!6.31e-16!73;UBERON:0005743!6.31e-16!73;UBERON:0004121!5.24e-15!102;UBERON:0000924!5.24e-15!102;UBERON:0006601!5.24e-15!102;UBERON:0007811!5.34e-15!86;UBERON:0000073!7.66e-15!75;UBERON:0001016!7.66e-15!75;UBERON:0003056!1.09e-14!49;UBERON:0001049!7.29e-14!52;UBERON:0005068!7.29e-14!52;UBERON:0006241!7.29e-14!52;UBERON:0007135!7.29e-14!52;UBERON:0000033!7.57e-14!63;UBERON:0003080!1.75e-11!40;UBERON:0002780!3.42e-11!39;UBERON:0001890!3.42e-11!39;UBERON:0006240!3.42e-11!39;UBERON:0002020!3.81e-11!34;UBERON:0000955!1.50e-10!50;UBERON:0006238!1.50e-10!50;UBERON:0002616!3.40e-10!49;UBERON:0002791!8.18e-09!29;UBERON:0003528!8.18e-09!29;UBERON:0001893!8.18e-09!29;UBERON:0000468!2.66e-08!333;UBERON:0000922!4.31e-07!328
|ontology_enrichment_uberon=UBERON:0002346!3.42e-18!71;UBERON:0003075!3.42e-18!71;UBERON:0007284!3.42e-18!71;UBERON:0000153!2.78e-16!94;UBERON:0001017!6.31e-16!73;UBERON:0005743!6.31e-16!73;UBERON:0004121!5.24e-15!102;UBERON:0000924!5.24e-15!102;UBERON:0006601!5.24e-15!102;UBERON:0007811!5.34e-15!86;UBERON:0000073!7.66e-15!75;UBERON:0001016!7.66e-15!75;UBERON:0003056!1.09e-14!49;UBERON:0001049!7.29e-14!52;UBERON:0005068!7.29e-14!52;UBERON:0006241!7.29e-14!52;UBERON:0007135!7.29e-14!52;UBERON:0000033!7.57e-14!63;UBERON:0003080!1.75e-11!40;UBERON:0002780!3.42e-11!39;UBERON:0001890!3.42e-11!39;UBERON:0006240!3.42e-11!39;UBERON:0002020!3.81e-11!34;UBERON:0000955!1.50e-10!50;UBERON:0006238!1.50e-10!50;UBERON:0002616!3.40e-10!49;UBERON:0002791!8.18e-09!29;UBERON:0003528!8.18e-09!29;UBERON:0001893!8.18e-09!29;UBERON:0000468!2.66e-08!333;UBERON:0000922!4.31e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.40e-19,92;UBERON:0002346,8.31e-19,64;UBERON:0003075,8.31e-19,64;UBERON:0007284,8.31e-19,64;UBERON:0001017,1.36e-16,73;UBERON:0010371,4.62e-16,73;UBERON:0001016,3.15e-15,75;UBERON:0003056,3.79e-15,49;UBERON:0004121,8.93e-15,95;UBERON:0000924,8.93e-15,95;UBERON:0006601,8.93e-15,95;UBERON:0001049,2.72e-14,52;UBERON:0005068,2.72e-14,52;UBERON:0006241,2.72e-14,52;UBERON:0007135,2.72e-14,52;UBERON:0000073,5.31e-13,54;UBERON:0000955,3.36e-12,47;UBERON:0006238,3.36e-12,47;UBERON:0003080,7.91e-12,40;UBERON:0002616,8.09e-12,46;UBERON:0002780,1.58e-11,39;UBERON:0001890,1.58e-11,39;UBERON:0006240,1.58e-11,39;UBERON:0002020,1.77e-11,34;UBERON:0003528,4.57e-09,29;UBERON:0002791,4.57e-09,29;UBERON:0001893,4.57e-09,29;UBERON:0000922,2.79e-07,320;UBERON:0000956,6.66e-07,21;UBERON:0001869,6.66e-07,21;UBERON:0000203,6.66e-07,21
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|phase1_expression=5.12476310735341,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.467225281191051,2.96983643915625,4.08287294239834,3.97909694747389,0.856089841127525,0.957265907944037,3.59521532855532,2.71003247498892,0,0.202475267389826,0,1.26184866143295,1.23402990245165,0.42438965179803,3.23164502574065,0,0,0.47997726838022,0,0,0,0,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.734187008646726,3.9119567217402,1.74420125104357,1.5378032791413,2.13872888981712,1.81982348112971,1.43752564364972,0.671130424230945,2.17608642603403,2.01656279485478,0,0.85960031981627,2.06268836910977,6.47412674750713,4.7609188134483,3.80298842103708,1.0165335962074,0.889294796111139,0,0,1.4209602298922,1.19840044207362,2.68952813725088,4.76972216618997,7.02030879324791,3.57552434297349,4.57041575046086,5.07997644188711,4.65465037016825,6.13411014516713,3.67687514644008,0,2.17068474744819,1.22885226604995,6.3305418110493,5.58074625974699,6.25096044668112,1.11673199600552,1.68828783009504,3.36156145108982,5.00868595305235,5.55249555116501,6.89677949553612,0.37863096666592,0.755715601067855,0.579728977403356,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0.865964164044856,0.253359865475099,0,0.91347103775248,0.517875767294343,1.33597925158342,3.64319186208885,3.65358573974569,1.61430848079241,2.56228488939458,3.88042733547826,1.75933227861546,0.494389935468748,1.01219549843938,1.76922110389975,1.61766849947409,0.441683036920787,0.969750506270444,0,2.04946557908083,3.56059401582874,0,0.239630249011841,0,0.254140454146129,3.89455662452539,5.49000723382352,8.41884159156192,2.60736480288415,3.83573185995496,2.28566849015516,4.05603157669394,3.05518091550949,1.61729061793121,1.0108910337347,1.05220927943237,3.3831315170303,3.67843367093557,5.04173963454978,4.82255417074288,8.16437989815934,7.04625461566674,6.8402258928602,5.69147415625834,4.95806383745537,5.8622884852024,5.45448484908241,4.3839146485515,3.89266148915837,1.0447564995665,2.05782136407943,5.37392520409932,0,0.257347907114715,0.568326998791185,5.17814431338755,3.98694301967864,1.98068267607116,4.02466050494857,2.75469924446365,3.23960937063494,4.88321283975857,1.60964040839772,3.85325629811659,5.10135534731789,2.29834449710733,2.59420190546738,1.75439984910399,1.3173006917463,1.34206418760372,4.41608891984667,9.36431972651488,0,0.264450566663544,5.54549451391608,3.0190767341857,2.06187938115349,1.21010114774006,2.2237804384487,0.570676878337677,0.474529061544512,0.823494773620054,2.76468729680296,0.795825888164603,1.75467678407208,0,0,0.199141273254367,3.41402221715547,3.08470984046268,2.25415471346161,2.8511185898344,3.29719228184964,4.27828501330943,2.84564417059158,1.47610147979602,0.941992367048249,1.1105744752962,0.296452627087149,0.333690211432188,0.393117990226406,0,0.608580364165509,0,0,0.287696137450811,1.13494658742525,0,0,1.11642284300551,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,1.10851914099963,4.9267767060326,2.93336957595647,3.05541154395339,3.28566347603903,2.01007508930179,2.85652369063216,3.12213836572478,0.945810864637146,2.87904096543407,2.07291199254733,1.14704320301017,0.690739927463582,1.44649058581512,0,0,0,0.275936746304732,1.9266070798535,3.16471553798949,0.327869890753351,1.26235463602186,4.10160685241134,3.51394869866975,4.52389135238878,3.82350076724083,4.45597348164788,3.11384183867716,5.26253912177363,2.92255857911312,1.58115111178609,4.4984984299053,1.98716119291576,4.62970569534864,5.86393053672874,2.47455184458803,0,3.39892890616974,0.906970670894253,1.13163047853539,0.295301892880773,0.922305443831782,2.32585463851399,1.45413491791002,0.712994756769443,1.26414703174326,0,0,1.70219802876894,5.58189391497062,6.20921682157222,3.21505552547388,3.54680467284547,5.35106452806212,3.29098041204242,5.17590413494819,1.17335854031855,1.69465656691056,0.441056796109924,0.16488625294148,2.42196640043858,1.14594557363496,0.835606408021955,1.47726809770555,1.1659233465194,2.78137953015765,0.170870880797853,3.09580301944834,1.11116716421827,0.376736914009382,0.27338845544205,0.228778173206523,1.35982743995084,1.39951452323658,1.38199973804424,0.954670618015114,5.06137589729817,2.43983360552218,2.05210147561422,1.46361807210128,2.40198820120795,1.61837215661785,0.991841468704031,0.523511883968059,0.518459893167171,0.621339313086926,16.3470952218415,6.13017838780313,5.46013018508422,4.27792614356905,3.87479470433193,2.19642963138012,5.51579021635044,3.9061315453185,5.55754525456268,5.55643477899814,8.92893019399383,3.79213344753814,2.63542779877213,2.2596410576262,1.68897069871134,3.04345382634718,2.98022032171897,3.00488623799922,3.83992770653901,4.64445669761479,5.56309688581499,4.03304740547362,5.55509920216589,3.75226182397285,6.31135271780472,1.58711268530648,1.77588762699252,2.06341870201794,0.503653849092235,0.579568782096571,0.750729901804728,0.36630324853453,0.214368379079066,1.50471631210609,5.64751842617067,3.68260189205742,4.01026859407578,4.1244763762485,4.7955776383945,5.2877572817279,3.37511250115903,3.60256962579376,3.62513927187364,3.10656187051092,3.00983307994112,10.7736715818278,5.12200817262403,2.43106717068294,2.30574478890781,2.38996560985018,1.55572709461131,2.26638562962784,3.85103051510178,2.27427490587418,3.04175159868288,2.82939512079114,2.62196220915671,2.36893063898016,2.64203157195821,3.33405583898152,3.47652977834566,1.35036454324594,2.88460130562315,2.50238164228475,2.74295401908332,2.12970967391205,2.62279808942053,2.0348498328526,2.63506265162926,2.19997980518359,3.47563148458268,1.57841826862706,2.17286582153379,3.92799590160417,2.49133538060766,2.56111654176465,2.04615521584845,3.56354734727722,2.89359916471712,5.24602213669686,3.27504251823572,3.00819475667618,2.86932498103265,0.661774257358546,1.15933917810211
|short_description=p3@Krba1
|short_description=p3@Krba1
}}
}}

Latest revision as of 07:14, 27 September 2015

Short description:p3@Krba1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Krba1_5end
Coexpression cluster:MCL_coexpression_mm9:1946
Association with transcript: 0bp_to_ENSMUST00000127980_5end
EntrezGene:Krba1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Krba1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G86.84
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E25.45
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.28
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D35.56
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A25.56
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G26.31
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.32e-0933
neuronal stem cell5.32e-0933
neuroblast5.32e-0933
electrically signaling cell5.32e-0933
ectodermal cell3.28e-0744
neurectodermal cell3.28e-0744
neural cell8.34e-0743
CNS neuron (sensu Vertebrata)8.91e-0723
neuroblast (sensu Vertebrata)8.91e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.40e-1992
neurectoderm8.31e-1964
neural plate8.31e-1964
presumptive neural plate8.31e-1964
central nervous system1.36e-1673
ecto-epithelium4.62e-1673
nervous system3.15e-1575
pre-chordal neural plate3.79e-1549
ectoderm-derived structure8.93e-1595
ectoderm8.93e-1595
presumptive ectoderm8.93e-1595
neural tube2.72e-1452
neural rod2.72e-1452
future spinal cord2.72e-1452
neural keel2.72e-1452
regional part of nervous system5.31e-1354
brain3.36e-1247
future brain3.36e-1247
anterior neural tube7.91e-1240
regional part of brain8.09e-1246
regional part of forebrain1.58e-1139
forebrain1.58e-1139
future forebrain1.58e-1139
gray matter1.77e-1134
brain grey matter4.57e-0929
regional part of telencephalon4.57e-0929
telencephalon4.57e-0929
embryo2.79e-07320
cerebral cortex6.66e-0721
cerebral hemisphere6.66e-0721
pallium6.66e-0721
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