FFCP PHASE1:Mm9::chr3:107499380..107499492,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:107499380..107499492,-
|short_description=p1@Ahcyl1
|description=CAGE_peak_1_at_Ahcyl1_5end
|association_with_transcript=0bp_to_ENSMUST00000029490,ENSMUST0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=229709 | |EntrezGene=229709 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1361 | |||
|TSSclassifier=NA | |||
|UniProt=Q80SW1,Q80TQ9 | |UniProt=Q80SW1,Q80TQ9 | ||
|association_with_transcript=0bp_to_ENSMUST00000029490,ENSMUST00000138116,NM_145542,uc008qxj.1_5end | |||
|cluster_id=chr3:107499380..107499492,- | |||
|description=CAGE_peak_1_at_Ahcyl1_5end | |||
|id=chr3:107499380..107499492,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.21e-10!50;UBERON:0006238!1.21e-10!50;UBERON:0001049!1.75e-10!52;UBERON:0005068!1.75e-10!52;UBERON:0006241!1.75e-10!52;UBERON:0007135!1.75e-10!52;UBERON:0002616!3.20e-10!49;UBERON:0000033!5.56e-10!63;UBERON:0002346!6.74e-10!71;UBERON:0003075!6.74e-10!71;UBERON:0007284!6.74e-10!71;UBERON:0002020!4.50e-09!34;UBERON:0001017!5.75e-09!73;UBERON:0005743!5.75e-09!73;UBERON:0004121!1.24e-08!102;UBERON:0000924!1.24e-08!102;UBERON:0006601!1.24e-08!102;UBERON:0000073!5.18e-08!75;UBERON:0001016!5.18e-08!75;UBERON:0002791!7.03e-08!29;UBERON:0003528!7.03e-08!29;UBERON:0001893!7.03e-08!29;UBERON:0000344!7.34e-08!15;UBERON:0003080!9.97e-08!40;UBERON:0003056!1.40e-07!49;UBERON:0002780!2.84e-07!39;UBERON:0001890!2.84e-07!39;UBERON:0006240!2.84e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-11,54;UBERON:0001049,1.75e-10,52;UBERON:0005068,1.75e-10,52;UBERON:0006241,1.75e-10,52;UBERON:0007135,1.75e-10,52;UBERON:0010371,1.71e-09,73;UBERON:0002346,2.21e-09,64;UBERON:0003075,2.21e-09,64;UBERON:0007284,2.21e-09,64;UBERON:0000955,3.77e-09,47;UBERON:0006238,3.77e-09,47;UBERON:0002020,4.50e-09,34;UBERON:0001017,5.75e-09,73;UBERON:0002616,9.54e-09,46;UBERON:0004121,5.16e-08,95;UBERON:0000924,5.16e-08,95;UBERON:0006601,5.16e-08,95;UBERON:0001016,5.18e-08,75;UBERON:0003528,7.03e-08,29;UBERON:0002791,7.03e-08,29;UBERON:0001893,7.03e-08,29;UBERON:0000344,7.34e-08,15;UBERON:0003080,9.97e-08,40;UBERON:0003056,1.40e-07,49;UBERON:0002780,2.84e-07,39;UBERON:0001890,2.84e-07,39;UBERON:0006240,2.84e-07,39 | |||
|phase1_expression=83.5976981887025,848.010240563647,1100.64316008329,621.563954235536,610.090999074651,314.269997019058,285.941872088923,54.7482891392283,110.519146889058,105.563101371219,88.5196895725861,86.6325646689353,48.4498065705312,52.6270822562364,39.6400616560639,42.1148556170838,54.5658264939954,41.7987369099665,43.1910465858077,45.8340823941873,79.9406927420056,65.5320277925843,57.9863531888437,305.425535112613,256.020757670962,576.52889197148,547.498497118184,390.649344859517,75.2492741047241,104.592503850371,101.774304390785,47.6273005094723,38.7490816178279,15.8481681015439,143.559255016383,135.481235967171,150.676984921628,48.1311375347444,47.6614560159518,49.211231933537,49.4114449946052,51.2284113718834,41.7538903606792,138.990087045037,127.734933336588,100.216526680278,68.0680469582794,65.1895217577535,107.646229539891,132.406761269587,150.905362512141,71.8762821824858,44.2946079992424,43.5217285206807,43.0200062902354,131.974090686441,122.06324541391,116.541892854702,84.5682806393119,96.805349206782,71.6229485961982,44.0497891689872,72.9221732811134,37.3458382671781,37.576921777545,34.1030455174128,36.251613372727,47.2588515545512,87.2029639514297,82.7586401973264,87.4951839221749,133.113358732172,115.955983999597,85.7435594504678,88.4653697498322,82.7296907949019,301.717513938325,220.643720211204,235.325208948565,80.978180666339,70.1710226430482,85.4297927713086,216.646007225072,172.205358669694,199.554511596514,142.894863954729,124.005733976019,87.6077395378913,50.1307399865678,53.6558076758177,60.291813649949,114.436375638524,74.7968467078526,117.115592585406,141.001482586144,120.071205742086,85.6710962803686,192.415834190627,151.715026688075,138.862452782564,84.2243650264549,209.172158185338,476.485798251427,732.398704247931,65.5967854263979,53.965651346196,53.0800667265522,102.879675626873,35.7334279433097,118.605269112795,65.9244241711316,83.7280065358388,86.711426968278,95.859599391468,95.2468527799209,160.350570536666,59.0795972885154,269.966999369475,47.7689698052932,64.5449731290163,64.7065649088953,62.5489076544437,91.3319629968799,194.699230012679,220.966275688195,139.735009199099,50.8016127905102,43.7928993625188,56.2921105933677,234.272560029143,210.450277296568,118.366399690318,197.116779098042,259.039758275625,201.969979311892,245.30878975845,86.1561018173676,84.5967400148633,72.0259861535973,95.7510444283457,72.6072071731887,77.4770091940804,69.5039821048648,78.5172100924075,95.7953908050696,95.9571764933525,91.7339883439745,146.684811209022,65.532669851584,68.6455071009184,66.3335738098087,69.0466557146861,69.7898595556251,74.8742158022658,80.8723796083218,67.0745479178322,42.8350044261073,41.4330130454691,49.7286123942287,48.2603050007719,50.6576289559168,51.8578737007723,51.3736076219906,52.142521413062,56.3074962038931,61.3889614141077,63.3125227303101,59.9006206343579,66.8112990648731,77.8153779734911,82.2037728794977,91.6673921156834,92.4305985375323,84.4158374002738,181.690515559406,128.527860861726,686.940649823316,174.008472864612,73.5844464346557,80.3538884637117,68.8152243459978,71.3959677166633,63.377742495788,81.7970192284004,186.489921186993,82.5141763167294,92.2400216296989,79.3836323444192,91.6331209459865,166.281590601031,135.302419221559,264.260469608545,66.3837653335786,69.3488471541054,91.2932658951951,69.4451027952522,81.0721396360676,88.9322196209239,91.187086533179,107.75540802511,125.127986089576,125.371518544549,87.7499776177961,56.727335943472,55.4296366219233,48.3453541627436,55.9893935032268,58.3648726600849,55.7630615401309,61.2792772770227,72.6365815952159,65.6201777519515,80.5101956553185,72.5674847953582,75.5131168937237,98.2531835214265,107.638448113147,114.339114563118,54.1326847188152,61.774200237178,72.0305195873754,68.577014653176,63.3663670378956,63.65237782789,65.7000448845398,68.882177693803,83.2313560880688,75.740923859881,79.7273843287436,76.1964413428182,76.3267619847258,72.3245292907558,48.2532108605671,33.1782467129413,101.303440241921,73.1232377707541,274.380958289136,283.769493239724,146.557841166748,74.7313944524944,73.8289233434041,53.0996692243428,80.352927354334,78.6207345263896,80.8759186919091,91.4337194447929,71.2466834947814,77.1555464885863,78.2669800334117,176.08408139915,88.8544933403762,68.377191808226,74.7651143432914,89.5787767740868,87.6117913043755,68.9497006680147,73.1623007854698,92.2278840006342,77.0737940418817,90.0784983475707,106.989313371644,83.9762915093038,88.4113498394109,111.560975551343,109.635352917999,118.605874735415,94.6422103995531,69.1434601080231,68.3013850372944,77.1613326113732,77.8523625689581,93.465260423485,89.5146672075538,69.113543449014,51.86244748208,64.1851174717375,98.7967223286229,73.0446100530757,107.696772606169,78.2861765567463,97.6465773945656,103.408766839389,136.99599321603,268.124986707197,46.8186213386116,74.5056593347233,62.5957502509625,57.4523793864308,48.663145068685,59.0247686872828,74.6205307673025,62.9781535456461,62.3281881857951,67.7816138790731,61.3691827547403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| |phase1_expression=83.5976981887025,848.010240563647,1100.64316008329,621.563954235536,610.090999074651,314.269997019058,285.941872088923,54.7482891392283,110.519146889058,105.563101371219,88.5196895725861,86.6325646689353,48.4498065705312,52.6270822562364,39.6400616560639,42.1148556170838,54.5658264939954,41.7987369099665,43.1910465858077,45.8340823941873,79.9406927420056,65.5320277925843,57.9863531888437,305.425535112613,256.020757670962,576.52889197148,547.498497118184,390.649344859517,75.2492741047241,104.592503850371,101.774304390785,47.6273005094723,38.7490816178279,15.8481681015439,143.559255016383,135.481235967171,150.676984921628,48.1311375347444,47.6614560159518,49.211231933537,49.4114449946052,51.2284113718834,41.7538903606792,138.990087045037,127.734933336588,100.216526680278,68.0680469582794,65.1895217577535,107.646229539891,132.406761269587,150.905362512141,71.8762821824858,44.2946079992424,43.5217285206807,43.0200062902354,131.974090686441,122.06324541391,116.541892854702,84.5682806393119,96.805349206782,71.6229485961982,44.0497891689872,72.9221732811134,37.3458382671781,37.576921777545,34.1030455174128,36.251613372727,47.2588515545512,87.2029639514297,82.7586401973264,87.4951839221749,133.113358732172,115.955983999597,85.7435594504678,88.4653697498322,82.7296907949019,301.717513938325,220.643720211204,235.325208948565,80.978180666339,70.1710226430482,85.4297927713086,216.646007225072,172.205358669694,199.554511596514,142.894863954729,124.005733976019,87.6077395378913,50.1307399865678,53.6558076758177,60.291813649949,114.436375638524,74.7968467078526,117.115592585406,141.001482586144,120.071205742086,85.6710962803686,192.415834190627,151.715026688075,138.862452782564,84.2243650264549,209.172158185338,476.485798251427,732.398704247931,65.5967854263979,53.965651346196,53.0800667265522,102.879675626873,35.7334279433097,118.605269112795,65.9244241711316,83.7280065358388,86.711426968278,95.859599391468,95.2468527799209,160.350570536666,59.0795972885154,269.966999369475,47.7689698052932,64.5449731290163,64.7065649088953,62.5489076544437,91.3319629968799,194.699230012679,220.966275688195,139.735009199099,50.8016127905102,43.7928993625188,56.2921105933677,234.272560029143,210.450277296568,118.366399690318,197.116779098042,259.039758275625,201.969979311892,245.30878975845,86.1561018173676,84.5967400148633,72.0259861535973,95.7510444283457,72.6072071731887,77.4770091940804,69.5039821048648,78.5172100924075,95.7953908050696,95.9571764933525,91.7339883439745,146.684811209022,65.532669851584,68.6455071009184,66.3335738098087,69.0466557146861,69.7898595556251,74.8742158022658,80.8723796083218,67.0745479178322,42.8350044261073,41.4330130454691,49.7286123942287,48.2603050007719,50.6576289559168,51.8578737007723,51.3736076219906,52.142521413062,56.3074962038931,61.3889614141077,63.3125227303101,59.9006206343579,66.8112990648731,77.8153779734911,82.2037728794977,91.6673921156834,92.4305985375323,84.4158374002738,181.690515559406,128.527860861726,686.940649823316,174.008472864612,73.5844464346557,80.3538884637117,68.8152243459978,71.3959677166633,63.377742495788,81.7970192284004,186.489921186993,82.5141763167294,92.2400216296989,79.3836323444192,91.6331209459865,166.281590601031,135.302419221559,264.260469608545,66.3837653335786,69.3488471541054,91.2932658951951,69.4451027952522,81.0721396360676,88.9322196209239,91.187086533179,107.75540802511,125.127986089576,125.371518544549,87.7499776177961,56.727335943472,55.4296366219233,48.3453541627436,55.9893935032268,58.3648726600849,55.7630615401309,61.2792772770227,72.6365815952159,65.6201777519515,80.5101956553185,72.5674847953582,75.5131168937237,98.2531835214265,107.638448113147,114.339114563118,54.1326847188152,61.774200237178,72.0305195873754,68.577014653176,63.3663670378956,63.65237782789,65.7000448845398,68.882177693803,83.2313560880688,75.740923859881,79.7273843287436,76.1964413428182,76.3267619847258,72.3245292907558,48.2532108605671,33.1782467129413,101.303440241921,73.1232377707541,274.380958289136,283.769493239724,146.557841166748,74.7313944524944,73.8289233434041,53.0996692243428,80.352927354334,78.6207345263896,80.8759186919091,91.4337194447929,71.2466834947814,77.1555464885863,78.2669800334117,176.08408139915,88.8544933403762,68.377191808226,74.7651143432914,89.5787767740868,87.6117913043755,68.9497006680147,73.1623007854698,92.2278840006342,77.0737940418817,90.0784983475707,106.989313371644,83.9762915093038,88.4113498394109,111.560975551343,109.635352917999,118.605874735415,94.6422103995531,69.1434601080231,68.3013850372944,77.1613326113732,77.8523625689581,93.465260423485,89.5146672075538,69.113543449014,51.86244748208,64.1851174717375,98.7967223286229,73.0446100530757,107.696772606169,78.2861765567463,97.6465773945656,103.408766839389,136.99599321603,268.124986707197,46.8186213386116,74.5056593347233,62.5957502509625,57.4523793864308,48.663145068685,59.0247686872828,74.6205307673025,62.9781535456461,62.3281881857951,67.7816138790731,61.3691827547403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| ||
|short_description=p1@Ahcyl1 | |||
}} | }} |
Latest revision as of 07:09, 27 September 2015
Short description: | p1@Ahcyl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ahcyl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1361 |
Association with transcript: | 0bp_to_ENSMUST00000029490, ENSMUST00000138116, NM_145542, uc008qxj.1_5end |
EntrezGene: | Ahcyl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.71e-11 | 54 |
neural tube | 1.75e-10 | 52 |
neural rod | 1.75e-10 | 52 |
future spinal cord | 1.75e-10 | 52 |
neural keel | 1.75e-10 | 52 |
ecto-epithelium | 1.71e-09 | 73 |
neurectoderm | 2.21e-09 | 64 |
neural plate | 2.21e-09 | 64 |
presumptive neural plate | 2.21e-09 | 64 |
brain | 3.77e-09 | 47 |
future brain | 3.77e-09 | 47 |
gray matter | 4.50e-09 | 34 |
central nervous system | 5.75e-09 | 73 |
regional part of brain | 9.54e-09 | 46 |
ectoderm-derived structure | 5.16e-08 | 95 |
ectoderm | 5.16e-08 | 95 |
presumptive ectoderm | 5.16e-08 | 95 |
nervous system | 5.18e-08 | 75 |
brain grey matter | 7.03e-08 | 29 |
regional part of telencephalon | 7.03e-08 | 29 |
telencephalon | 7.03e-08 | 29 |
mucosa | 7.34e-08 | 15 |
anterior neural tube | 9.97e-08 | 40 |
pre-chordal neural plate | 1.40e-07 | 49 |
regional part of forebrain | 2.84e-07 | 39 |
forebrain | 2.84e-07 | 39 |
future forebrain | 2.84e-07 | 39 |