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FFCP PHASE1:Mm9::chr3:107470616..107470624,-: Difference between revisions

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{{FFCP|EntrezGene=229709|HGNC=|UniProt=|association_with_transcript=-215bp_to_ENSMUST00000137583_5end|description=CAGE_peak_3_at_Ahcyl1_5end|id=chr3:107470616..107470624,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.51e-07,23;CL:0000337,2.51e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.17e-10!52;UBERON:0005068!3.17e-10!52;UBERON:0006241!3.17e-10!52;UBERON:0007135!3.17e-10!52;UBERON:0002346!4.79e-10!71;UBERON:0003075!4.79e-10!71;UBERON:0007284!4.79e-10!71;UBERON:0002616!2.97e-09!49;UBERON:0000033!8.59e-09!63;UBERON:0000955!1.24e-08!50;UBERON:0006238!1.24e-08!50;UBERON:0001017!6.28e-08!73;UBERON:0005743!6.28e-08!73;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75;UBERON:0004121!5.09e-07!102;UBERON:0000924!5.09e-07!102;UBERON:0006601!5.09e-07!102;UBERON:0003080!5.50e-07!40;UBERON:0003056!6.80e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-13,54;UBERON:0002021,1.89e-13,10;UBERON:0000411,1.89e-13,10;UBERON:0001950,1.89e-13,10;UBERON:0001049,1.40e-11,52;UBERON:0005068,1.40e-11,52;UBERON:0006241,1.40e-11,52;UBERON:0007135,1.40e-11,52;UBERON:0001017,3.04e-11,73;UBERON:0001016,9.29e-11,75;UBERON:0002020,6.56e-09,34;UBERON:0002346,2.36e-08,64;UBERON:0003075,2.36e-08,64;UBERON:0007284,2.36e-08,64;UBERON:0002616,2.98e-08,46;UBERON:0000955,5.52e-08,47;UBERON:0006238,5.52e-08,47;UBERON:0004121,7.73e-08,95;UBERON:0000924,7.73e-08,95;UBERON:0006601,7.73e-08,95;UBERON:0003080,1.02e-07,40;UBERON:0002950,1.62e-07,4;UBERON:0001891,1.62e-07,4;UBERON:0009616,1.62e-07,4;UBERON:0010286,1.62e-07,4;UBERON:0002619,3.98e-07,17;UBERON:0002780,6.31e-07,39;UBERON:0001890,6.31e-07,39;UBERON:0006240,6.31e-07,39|phase1_expression=0.480446541314382,0.697950815278722,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.510259740906419,0.397163804803541,1.04479915655574,1.91990907352088,0.68822784320151,0,0.430761996159075,1.07735616342945,0.380046838912748,0.252030129759931,0,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0.336093799142464,2.05807548828758,0,0,1.01158230429799,1.05798195854407,0,0,0,0,1.97773272513395,0,0,0,0.622137673850866,0.675029691658453,0.210324961351382,1.99955689082663,1.98781686856452,0.122490799214954,0.287536413054709,0,1.10115880999389,1.78762273319263,1.99688493233117,0,0.731901148819277,0,4.4669279840221,1.12552522006336,1.5279824777681,0.883885756421003,2.27794689278565,0.372798891650601,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,1.1930122580464,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,1.05505848386836,0.23517741427141,0.376999773989026,0.494389935468748,0.578397427679647,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,0.239630249011841,0,0.127070227073065,1.3481157546434,0.915001205637253,0.502617408451458,0.347648640384553,0.511430914660661,2.28566849015516,0.973447578406546,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.180062129805349,0.452114453507145,0.340182495756639,0.384341160854549,0.281105173679186,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.350296027101508,0.329119699826961,0.820837320395476,0.324275238183423,0.877199924551994,0.219550115291051,0.671032093801859,0.841159794256509,0.514523061896422,1.32167513193519,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,1.00534083520108,0,0.38992817423824,3.59527763461689,1.94524244887225,1.7922714592893,0.189667900953082,0.342745537829186,0,0.610953983535943,0.581857461502877,0.140271639780637,0.189709611372772,0.147610147979602,0.941992367048249,0.740382983530803,1.1858105083486,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.549122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0,0.358794827043824,1.4473305640901,0,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,1.44495530989013,1.40654023910644,0.491804836130026,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229709
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-215bp_to_ENSMUST00000137583_5end
|cluster_id=chr3:107470616..107470624,-
|description=CAGE_peak_3_at_Ahcyl1_5end
|id=chr3:107470616..107470624,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.51e-07,23;CL:0000337,2.51e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.17e-10!52;UBERON:0005068!3.17e-10!52;UBERON:0006241!3.17e-10!52;UBERON:0007135!3.17e-10!52;UBERON:0002346!4.79e-10!71;UBERON:0003075!4.79e-10!71;UBERON:0007284!4.79e-10!71;UBERON:0002616!2.97e-09!49;UBERON:0000033!8.59e-09!63;UBERON:0000955!1.24e-08!50;UBERON:0006238!1.24e-08!50;UBERON:0001017!6.28e-08!73;UBERON:0005743!6.28e-08!73;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75;UBERON:0004121!5.09e-07!102;UBERON:0000924!5.09e-07!102;UBERON:0006601!5.09e-07!102;UBERON:0003080!5.50e-07!40;UBERON:0003056!6.80e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-13,54;UBERON:0002021,1.89e-13,10;UBERON:0000411,1.89e-13,10;UBERON:0001950,1.89e-13,10;UBERON:0001049,1.40e-11,52;UBERON:0005068,1.40e-11,52;UBERON:0006241,1.40e-11,52;UBERON:0007135,1.40e-11,52;UBERON:0001017,3.04e-11,73;UBERON:0001016,9.29e-11,75;UBERON:0002020,6.56e-09,34;UBERON:0002346,2.36e-08,64;UBERON:0003075,2.36e-08,64;UBERON:0007284,2.36e-08,64;UBERON:0002616,2.98e-08,46;UBERON:0000955,5.52e-08,47;UBERON:0006238,5.52e-08,47;UBERON:0004121,7.73e-08,95;UBERON:0000924,7.73e-08,95;UBERON:0006601,7.73e-08,95;UBERON:0003080,1.02e-07,40;UBERON:0002950,1.62e-07,4;UBERON:0001891,1.62e-07,4;UBERON:0009616,1.62e-07,4;UBERON:0010286,1.62e-07,4;UBERON:0002619,3.98e-07,17;UBERON:0002780,6.31e-07,39;UBERON:0001890,6.31e-07,39;UBERON:0006240,6.31e-07,39
|phase1_expression=0.480446541314382,0.697950815278722,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0,0,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.510259740906419,0.397163804803541,1.04479915655574,1.91990907352088,0.68822784320151,0,0.430761996159075,1.07735616342945,0.380046838912748,0.252030129759931,0,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0.336093799142464,2.05807548828758,0,0,1.01158230429799,1.05798195854407,0,0,0,0,1.97773272513395,0,0,0,0.622137673850866,0.675029691658453,0.210324961351382,1.99955689082663,1.98781686856452,0.122490799214954,0.287536413054709,0,1.10115880999389,1.78762273319263,1.99688493233117,0,0.731901148819277,0,4.4669279840221,1.12552522006336,1.5279824777681,0.883885756421003,2.27794689278565,0.372798891650601,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,1.1930122580464,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,1.05505848386836,0.23517741427141,0.376999773989026,0.494389935468748,0.578397427679647,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,0.239630249011841,0,0.127070227073065,1.3481157546434,0.915001205637253,0.502617408451458,0.347648640384553,0.511430914660661,2.28566849015516,0.973447578406546,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.180062129805349,0.452114453507145,0.340182495756639,0.384341160854549,0.281105173679186,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.350296027101508,0.329119699826961,0.820837320395476,0.324275238183423,0.877199924551994,0.219550115291051,0.671032093801859,0.841159794256509,0.514523061896422,1.32167513193519,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,1.00534083520108,0,0.38992817423824,3.59527763461689,1.94524244887225,1.7922714592893,0.189667900953082,0.342745537829186,0,0.610953983535943,0.581857461502877,0.140271639780637,0.189709611372772,0.147610147979602,0.941992367048249,0.740382983530803,1.1858105083486,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.549122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0,0.358794827043824,1.4473305640901,0,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,1.44495530989013,1.40654023910644,0.491804836130026,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0.790575555893047,0,0,0.178065603667255,0.488660878060728,0,0,0.971122544619926,0.302323556964751,0.565815239267694,0,0.307435147943927,0,1.45413491791002,1.06949213515416,0.948110273807448,0,0,1.02131881726136,0.540183282093931,0.776152102696527,0,0.886701168211368,0.535106452806212,0.329098041204242,1.2178597964584,0,0,0,0.32977250588296,0,0.0603129249281559,0.477489376012546,0.492422699235184,1.1659233465194,1.66882771809459,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0,0,0.279902904647316,0.414599921413271,0.954670618015114,0.316335993581135,0.609958401380546,0.432021363287205,0,0.218362563746178,0.404593039154462,0.165306911450672,0.523511883968059,0.388844919875379,1.24267862617385,0,0,0.330916980914195,0.388902376688095,0.258319646955462,0.506868376472335,1.05621514781179,0,0.104859344425711,0.966336483304024,0.576060012515731,0.316011120628178,0.608175645870493,0.513554785824136,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,1.6942555278512,1.84130094602871,1.14579102687879,1.89038500578056,0,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,1.55328093525546,0.726511433089237,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.441596760403192,1.37147700954166,0.177475806159338,0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|short_description=p3@Ahcyl1
}}

Latest revision as of 07:08, 27 September 2015

Short description:p3@Ahcyl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ahcyl1_5end
Coexpression cluster:NA
Association with transcript: -215bp_to_ENSMUST00000137583_5end
EntrezGene:Ahcyl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ahcyl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.51e-0723
neuroblast (sensu Vertebrata)2.51e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.49e-1354
occipital lobe1.89e-1310
visual cortex1.89e-1310
neocortex1.89e-1310
neural tube1.40e-1152
neural rod1.40e-1152
future spinal cord1.40e-1152
neural keel1.40e-1152
central nervous system3.04e-1173
nervous system9.29e-1175
gray matter6.56e-0934
neurectoderm2.36e-0864
neural plate2.36e-0864
presumptive neural plate2.36e-0864
regional part of brain2.98e-0846
brain5.52e-0847
future brain5.52e-0847
ectoderm-derived structure7.73e-0895
ectoderm7.73e-0895
presumptive ectoderm7.73e-0895
anterior neural tube1.02e-0740
regional part of midbrain1.62e-074
midbrain1.62e-074
presumptive midbrain1.62e-074
midbrain neural tube1.62e-074
regional part of cerebral cortex3.98e-0717
regional part of forebrain6.31e-0739
forebrain6.31e-0739
future forebrain6.31e-0739
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