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FFCP PHASE1:Mm9::chr11:31900496..31900507,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18197
|EntrezGene=18197
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q5SS03
|UniProt=Q5SS03
|association_with_transcript=0bp_to_ENSMUST00000093219_5end
|association_with_transcript=0bp_to_ENSMUST00000093219_5end
|cluster_id=chr11:31900496..31900507,+
|description=CAGE_peak_3_at_Nsg2_5end
|description=CAGE_peak_3_at_Nsg2_5end
|id=chr11:31900496..31900507,+
|id=chr11:31900496..31900507,+
|ontology_enrichment_celltype=CL:0002319!4.49e-17!43;CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000221!6.44e-17!44;CL:0000133!6.44e-17!44;CL:0000117!1.71e-15!23;CL:0000337!1.71e-15!23;CL:0000055!8.72e-12!50;CL:0000393!1.08e-11!39;CL:0000211!1.08e-11!39
|ontology_enrichment_celltype=CL:0002319!4.49e-17!43;CL:0000540!4.60e-17!33;CL:0000047!4.60e-17!33;CL:0000031!4.60e-17!33;CL:0000404!4.60e-17!33;CL:0000221!6.44e-17!44;CL:0000133!6.44e-17!44;CL:0000117!1.71e-15!23;CL:0000337!1.71e-15!23;CL:0000055!8.72e-12!50;CL:0000393!1.08e-11!39;CL:0000211!1.08e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.97e-19,33;CL:0000047,2.97e-19,33;CL:0000031,2.97e-19,33;CL:0000404,2.97e-19,33;CL:0000117,5.11e-19,23;CL:0000337,5.11e-19,23;CL:0002319,3.93e-18,43;CL:0000221,2.20e-17,44;CL:0000133,2.20e-17,44;CL:0000393,2.52e-14,39;CL:0000211,2.52e-14,39;CL:0002609,7.18e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.11e-34!73;UBERON:0005743!2.11e-34!73;UBERON:0000073!1.17e-33!75;UBERON:0001016!1.17e-33!75;UBERON:0004121!2.20e-29!102;UBERON:0000924!2.20e-29!102;UBERON:0006601!2.20e-29!102;UBERON:0002346!1.12e-27!71;UBERON:0003075!1.12e-27!71;UBERON:0007284!1.12e-27!71;UBERON:0001049!1.07e-25!52;UBERON:0005068!1.07e-25!52;UBERON:0006241!1.07e-25!52;UBERON:0007135!1.07e-25!52;UBERON:0007811!3.64e-25!86;UBERON:0000955!1.41e-24!50;UBERON:0006238!1.41e-24!50;UBERON:0002616!6.39e-24!49;UBERON:0000033!1.29e-23!63;UBERON:0002020!1.15e-22!34;UBERON:0000153!3.12e-22!94;UBERON:0003056!1.21e-21!49;UBERON:0003080!1.98e-21!40;UBERON:0002780!6.93e-21!39;UBERON:0001890!6.93e-21!39;UBERON:0006240!6.93e-21!39;UBERON:0002791!1.01e-19!29;UBERON:0003528!1.01e-19!29;UBERON:0001893!1.01e-19!29;UBERON:0000956!9.40e-15!21;UBERON:0001869!9.40e-15!21;UBERON:0000203!9.40e-15!21;UBERON:0002619!6.71e-12!17;UBERON:0002021!2.57e-08!10;UBERON:0000411!2.57e-08!10;UBERON:0001950!2.57e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-38,73;UBERON:0001016,9.65e-37,75;UBERON:0000073,5.00e-32,54;UBERON:0001049,2.61e-30,52;UBERON:0005068,2.61e-30,52;UBERON:0006241,2.61e-30,52;UBERON:0007135,2.61e-30,52;UBERON:0002346,4.27e-30,64;UBERON:0003075,4.27e-30,64;UBERON:0007284,4.27e-30,64;UBERON:0004121,2.49e-28,95;UBERON:0000924,2.49e-28,95;UBERON:0006601,2.49e-28,95;UBERON:0002020,5.08e-28,34;UBERON:0000955,1.04e-26,47;UBERON:0006238,1.04e-26,47;UBERON:0002616,6.57e-26,46;UBERON:0003080,1.27e-24,40;UBERON:0003528,2.52e-24,29;UBERON:0002791,2.52e-24,29;UBERON:0001893,2.52e-24,29;UBERON:0002780,6.08e-24,39;UBERON:0001890,6.08e-24,39;UBERON:0006240,6.08e-24,39;UBERON:0010371,1.46e-23,73;UBERON:0003056,1.11e-22,49;UBERON:0000956,4.33e-18,21;UBERON:0001869,4.33e-18,21;UBERON:0000203,4.33e-18,21;UBERON:0010314,1.08e-16,92;UBERON:0002619,1.64e-14,17;UBERON:0002021,5.01e-10,10;UBERON:0000411,5.01e-10,10;UBERON:0001950,5.01e-10,10;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,2.73921167889929,0.174840804837995,0,0,0,0.946386496074713,0.274228867211478,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,3.51497892375155,3.11087838518853,0.839918529752175,4.31257693094915,0,5.80289713609076,4.36921938885203,0,0,0,37.226228798166,46.5512061759389,41.8328726314078,0,0,0,0,0,6.2916023208865,6.91592949578798,57.6514244435136,96.9342637221539,70.0382121300102,29.136400409188,30.7007271922743,43.3617429220937,47.5393536250452,71.6990653555816,19.82085857989,29.7511497738487,25.3450779872802,34.5542073853108,45.6523341576024,36.4639359389732,24.0097379141188,36.0168070420275,35.9075882275504,31.8198872311561,26.6235043094322,31.3151068986505,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,1.29468941823586,1.33597925158342,2.60227990149204,0.608930956624282,1.15307748628029,0.60289056221049,2.58695155698551,0.628332956648377,0,0,0.884610551949874,0.161766849947409,0,0,0,3.80615036115011,2.93225389538837,0.255457055208591,0,0,0,19.3229924832221,31.1100409916666,43.3507514789382,35.6339856394167,39.1244649715406,22.8566849015516,25.7963608277735,0,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,2.52086981727489,2.10986744970001,1.83698547708585,2.69038812598185,2.71735001223214,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0,49.628427861134,51.6581154144008,0,0,0,0.464473343720877,0.38660238396628,0,0.667134131534611,0.380451252225118,0.474529061544512,1.15289268306808,0.251335208800269,1.39269530428806,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,11.559642479121,10.3146284201139,0,0,3.47059041357882,7.80877488593277,6.46270193198397,0.955875191810208,1.78238939265915,1.13230612315533,5.26253912177363,5.55286130031493,8.69633111482352,34.7027021735552,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,7.48967132658334,1.62054984628179,0.646793418913773,1.71469628025274,1.41872186913819,1.42695054081656,2.79733335023606,0.913394847343798,0,0,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,6.30446026835733,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,11.0603892219862,0.405450430580328,0.718976700153791,2.85825810551149,6.44496104402933,7.9472541912506,6.61074972359829,9.59981926634752,12.5198397935703,10.6689529317,11.6958374758735,9.35595655101623,11.3529973135589,12.3889516312463,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,76.241498753304,77.3346397332057,64.1642975052124,75.0998406841915,43.1601987455505,50.6113911251099,44.5514850152992,36.9263386643861,40.7828168085784,40.385304316642,0.830298780673413,3.99024873401031,4.09760653809922,3.8897074730927,2.09613162627982,1.83843508450014,2.00022055021454,6.18105171716683,4.1719497246936,3.79045817645696,4.56262739802432,6.03604292435444,5.3375659257833,4.35371036353111,4.02048282689293,2.85776214769844,4.28772005995965,5.01563973205633,3.70877310722976,7.65434384698866,4.11443102862498,5.14679837862079,4.5302876089991,3.34296758254356,4.23492211868988,3.63842813934209,5.3049112133104,3.15683653725411,4.6173398707593,4.48913817326191,4.86403574309114,4.82671963640261,3.27384834535751,5.26785260032284,3.66522560864169,6.99469618226249,4.44470056046276,3.86767897286937,1.3390183244819,1.10295709559758,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,2.73921167889929,0.174840804837995,0,0,0,0.946386496074713,0.274228867211478,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,3.51497892375155,3.11087838518853,0.839918529752175,4.31257693094915,0,5.80289713609076,4.36921938885203,0,0,0,37.226228798166,46.5512061759389,41.8328726314078,0,0,0,0,0,6.2916023208865,6.91592949578798,57.6514244435136,96.9342637221539,70.0382121300102,29.136400409188,30.7007271922743,43.3617429220937,47.5393536250452,71.6990653555816,19.82085857989,29.7511497738487,25.3450779872802,34.5542073853108,45.6523341576024,36.4639359389732,24.0097379141188,36.0168070420275,35.9075882275504,31.8198872311561,26.6235043094322,31.3151068986505,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,1.29468941823586,1.33597925158342,2.60227990149204,0.608930956624282,1.15307748628029,0.60289056221049,2.58695155698551,0.628332956648377,0,0,0.884610551949874,0.161766849947409,0,0,0,3.80615036115011,2.93225389538837,0.255457055208591,0,0,0,19.3229924832221,31.1100409916666,43.3507514789382,35.6339856394167,39.1244649715406,22.8566849015516,25.7963608277735,0,0.124406970610093,0,0.631325567659422,0.520481771850815,0.919608417733892,2.52086981727489,2.10986744970001,1.83698547708585,2.69038812598185,2.71735001223214,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0,49.628427861134,51.6581154144008,0,0,0,0.464473343720877,0.38660238396628,0,0.667134131534611,0.380451252225118,0.474529061544512,1.15289268306808,0.251335208800269,1.39269530428806,0.38992817423824,0,0.864552199498777,0.796565093017469,0,0.456994050438915,0,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,11.559642479121,10.3146284201139,0,0,3.47059041357882,7.80877488593277,6.46270193198397,0.955875191810208,1.78238939265915,1.13230612315533,5.26253912177363,5.55286130031493,8.69633111482352,34.7027021735552,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,7.48967132658334,1.62054984628179,0.646793418913773,1.71469628025274,1.41872186913819,1.42695054081656,2.79733335023606,0.913394847343798,0,0,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,6.30446026835733,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,11.0603892219862,0.405450430580328,0.718976700153791,2.85825810551149,6.44496104402933,7.9472541912506,6.61074972359829,9.59981926634752,12.5198397935703,10.6689529317,11.6958374758735,9.35595655101623,11.3529973135589,12.3889516312463,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,76.241498753304,77.3346397332057,64.1642975052124,75.0998406841915,43.1601987455505,50.6113911251099,44.5514850152992,36.9263386643861,40.7828168085784,40.385304316642,0.830298780673413,3.99024873401031,4.09760653809922,3.8897074730927,2.09613162627982,1.83843508450014,2.00022055021454,6.18105171716683,4.1719497246936,3.79045817645696,4.56262739802432,6.03604292435444,5.3375659257833,4.35371036353111,4.02048282689293,2.85776214769844,4.28772005995965,5.01563973205633,3.70877310722976,7.65434384698866,4.11443102862498,5.14679837862079,4.5302876089991,3.34296758254356,4.23492211868988,3.63842813934209,5.3049112133104,3.15683653725411,4.6173398707593,4.48913817326191,4.86403574309114,4.82671963640261,3.27384834535751,5.26785260032284,3.66522560864169,6.99469618226249,4.44470056046276,3.86767897286937,1.3390183244819,1.10295709559758,0.695603506861264
|short_description=p3@Nsg2
|short_description=p3@Nsg2
}}
}}

Latest revision as of 07:08, 27 September 2015

Short description:p3@Nsg2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nsg2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000093219_5end
EntrezGene:Nsg2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nsg2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C337.23
Mouse Granule cells, donor2.CNhs12357.11731-123E346.55
Mouse Granule cells, donor3.CNhs12108.11636-122C741.83
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D557.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F596.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D970.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D243.36
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F247.54
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D671.70
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.32
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.32
corpus striatum, adult.CNhs10487.19-21D831.11
corpus striatum, neonate N00.CNhs11226.630-43F143.35
cortex, adult.CNhs10473.12-14D535.63
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F222.86
diencephalon, neonate N30.CNhs11201.1388-42B225.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E849.63
hippocampus, neonate N00.CNhs11228.627-43G151.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I934.70
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C79.60
thymus, neonate N06.CNhs11197.681-26C412.52
thymus, neonate N07.CNhs11211.713-19D310.67
thymus, neonate N10.CNhs11194.748-24E411.70
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G711.35
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A176.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A277.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A364.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D775.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A550.61
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A644.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.68e-3873
nervous system9.65e-3775
regional part of nervous system5.00e-3254
neural tube2.61e-3052
neural rod2.61e-3052
future spinal cord2.61e-3052
neural keel2.61e-3052
neurectoderm4.27e-3064
neural plate4.27e-3064
presumptive neural plate4.27e-3064
ectoderm-derived structure2.49e-2895
ectoderm2.49e-2895
presumptive ectoderm2.49e-2895
gray matter5.08e-2834
brain1.04e-2647
future brain1.04e-2647
regional part of brain6.57e-2646
anterior neural tube1.27e-2440
brain grey matter2.52e-2429
regional part of telencephalon2.52e-2429
telencephalon2.52e-2429
regional part of forebrain6.08e-2439
forebrain6.08e-2439
future forebrain6.08e-2439
ecto-epithelium1.46e-2373
pre-chordal neural plate1.11e-2249
cerebral cortex4.33e-1821
cerebral hemisphere4.33e-1821
pallium4.33e-1821
structure with developmental contribution from neural crest1.08e-1692
regional part of cerebral cortex1.64e-1417
occipital lobe5.01e-1010
visual cortex5.01e-1010
neocortex5.01e-1010
basal ganglion2.47e-078
nuclear complex of neuraxis2.47e-078
aggregate regional part of brain2.47e-078
collection of basal ganglia2.47e-078
cerebral subcortex2.47e-078
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