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FFCP PHASE1:Mm9::chr4:91043124..91043168,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:91043124..91043168,-
|DHSsupport=NA
|short_description=p1@Elavl2
|DPIdataset=NA
|description=CAGE_peak_1_at_Elavl2_5end
|association_with_transcript=0bp_to_ENSMUST00000107109,ENSMUST00000107111,ENSMUST00000107120_5end
|EntrezGene=15569
|EntrezGene=15569
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q3UR02,B1AXZ0,B1AXZ4
|UniProt=Q3UR02,B1AXZ0,B1AXZ4
|association_with_transcript=0bp_to_ENSMUST00000107109,ENSMUST00000107111,ENSMUST00000107120_5end
|cluster_id=chr4:91043124..91043168,-
|description=CAGE_peak_1_at_Elavl2_5end
|id=chr4:91043124..91043168,-
|ontology_enrichment_celltype=CL:0000540!1.94e-16!33;CL:0000047!1.94e-16!33;CL:0000031!1.94e-16!33;CL:0000404!1.94e-16!33;CL:0000117!1.39e-15!23;CL:0000337!1.39e-15!23;CL:0000393!3.81e-12!39;CL:0000211!3.81e-12!39;CL:0000221!4.99e-12!44;CL:0000133!4.99e-12!44;CL:0002319!5.70e-12!43;CL:0000055!1.46e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.19e-18,33;CL:0000047,3.19e-18,33;CL:0000031,3.19e-18,33;CL:0000404,3.19e-18,33;CL:0000117,2.90e-17,23;CL:0000337,2.90e-17,23;CL:0000393,3.49e-14,39;CL:0000211,3.49e-14,39;CL:0000221,1.65e-12,44;CL:0000133,1.65e-12,44;CL:0002319,1.95e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.12e-27!75;UBERON:0001016!6.12e-27!75;UBERON:0001017!9.37e-27!73;UBERON:0005743!9.37e-27!73;UBERON:0002346!1.92e-26!71;UBERON:0003075!1.92e-26!71;UBERON:0007284!1.92e-26!71;UBERON:0004121!1.51e-23!102;UBERON:0000924!1.51e-23!102;UBERON:0006601!1.51e-23!102;UBERON:0001049!1.10e-22!52;UBERON:0005068!1.10e-22!52;UBERON:0006241!1.10e-22!52;UBERON:0007135!1.10e-22!52;UBERON:0000033!5.57e-22!63;UBERON:0000955!1.33e-21!50;UBERON:0006238!1.33e-21!50;UBERON:0002616!4.35e-21!49;UBERON:0003056!2.83e-20!49;UBERON:0003080!2.91e-18!40;UBERON:0002020!5.79e-18!34;UBERON:0002780!1.29e-17!39;UBERON:0001890!1.29e-17!39;UBERON:0006240!1.29e-17!39;UBERON:0002791!3.78e-15!29;UBERON:0003528!3.78e-15!29;UBERON:0001893!3.78e-15!29;UBERON:0007811!1.20e-11!86;UBERON:0000153!2.68e-11!94;UBERON:0000956!2.27e-10!21;UBERON:0001869!2.27e-10!21;UBERON:0000203!2.27e-10!21;UBERON:0000468!3.96e-08!333;UBERON:0002619!6.63e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.10e-29,75;UBERON:0001017,8.34e-29,73;UBERON:0002346,5.30e-28,64;UBERON:0003075,5.30e-28,64;UBERON:0007284,5.30e-28,64;UBERON:0000073,2.74e-26,54;UBERON:0004121,6.40e-25,95;UBERON:0000924,6.40e-25,95;UBERON:0006601,6.40e-25,95;UBERON:0001049,1.02e-24,52;UBERON:0005068,1.02e-24,52;UBERON:0006241,1.02e-24,52;UBERON:0007135,1.02e-24,52;UBERON:0010371,1.43e-22,73;UBERON:0003056,8.28e-22,49;UBERON:0000955,3.16e-21,47;UBERON:0006238,3.16e-21,47;UBERON:0002616,1.15e-20,46;UBERON:0003080,1.56e-19,40;UBERON:0002020,3.78e-19,34;UBERON:0002780,8.17e-19,39;UBERON:0001890,8.17e-19,39;UBERON:0006240,8.17e-19,39;UBERON:0010314,2.41e-18,92;UBERON:0003528,5.16e-16,29;UBERON:0002791,5.16e-16,29;UBERON:0001893,5.16e-16,29;UBERON:0000956,1.03e-10,21;UBERON:0001869,1.03e-10,21;UBERON:0000203,1.03e-10,21;UBERON:0002619,5.35e-08,17;UBERON:0002021,9.08e-07,10;UBERON:0000411,9.08e-07,10;UBERON:0001950,9.08e-07,10
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0,0,2.61630187656536,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,65.5505333185097,69.8268092639083,74.7921056137291,0,0,0,0,0,0.599200221036809,0,93.6317199145553,62.3727435092411,71.3001618981185,21.7094748146891,20.0990372265968,70.1872279501687,43.3221529002428,53.3146896233812,63.8672109796454,55.6716794051418,71.4270379641532,69.1084147706216,58.5520919055422,74.4906119896167,61.4202597803038,55.7134983931363,48.7426410408024,50.3814881159972,57.9452740852349,76.9829711258491,2.34751199332871,5.97015324843606,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,3.23939865486365,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0,0,1.02765491747154,0,1.48442139064825,10.0621489524359,14.3098774806706,8.76338889573022,11.6056433225519,7.87844337809222,0.753999547978053,0,0.144599356919912,0,0.647067399789637,0,0,0,11.4184510834503,12.7762491156208,0,0,0,0,61.4141621559773,26.992535566299,42.596825366261,40.848715245185,34.2658712822643,74.3881199523225,43.4806585021591,0.611036183101898,0,0,1.89397670297827,9.36867189331467,16.0931473103431,21.2473313170312,20.1944455899858,9.66118287948856,12.811372028485,10.1197862524507,6.46758426847539,1.5089759505299,3.21480336285293,3.51902248327898,1.31517439456545,1.94633074457919,1.0447564995665,0.411564272815887,2.58744546864041,0,0,0,1.03562886267751,2.57978665979206,0.900310307305074,1.18372367792605,0.590292695242212,1.07986979021165,0.465067889500816,0,0.350296027101508,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.658650345873152,0.402619256281115,30.2817525932343,78.2075054082562,0,0,4.90562976231038,5.34144345279009,4.63922860759536,2.21851877085677,2.00140239460383,1.52180500890047,0,0.658795818896044,1.00534083520108,0,0.58489226135736,0,0,0.199141273254367,1.89667900953082,4.45569199177942,1.1270773567308,1.83286195060783,0.581857461502877,1.05203729835478,0,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,5.11626811780309,2.28150967018836,1.52770577197669,0.469380496577004,0.837531287209079,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,0.478364305972461,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0,0,78.6697890940181,64.9352743720806,7.70494243270374,0.252470927204373,7.88770548540642,10.1514073517126,11.8482868753039,5.73525115086125,12.0311284004493,9.34152551603147,7.69140333182299,10.8134667427185,8.30104333687699,27.9549545286972,0.99358059645788,1.06839362200353,0.81443479676788,0.164970122972535,0,2.6705869977048,1.81394134178851,1.32023555829129,0.295301892880773,1.53717573971964,1.55056975900933,0.363533729477506,0,0.632073515871632,1.05418608574999,1.03135543248187,13.2771446243977,10.8036656418786,3.88076051348264,9.21649250635847,11.8817956540323,10.8804978737263,13.3284706687718,4.26250928760439,0.23467170806371,0.21183207086382,3.30792597082443,0.32977250588296,0,0.120625849856312,0,0,0,63.0446026835733,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,3.95419991976419,4.87966721104437,3.67218158794124,1.88179466413022,2.40198820120795,1.34864346384821,0.909188012978695,0.26175594198403,0,0,0.56369293868419,2.24274819065968,2.15096037594227,1.16670713006429,2.58319646955462,3.54807863530634,2.58185925020659,0.39061315453185,1.04859344425711,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0.167884616364078,1.54551675225752,0,0.549454872801795,1.07184189539533,0,31.6261031865557,39.5879703396172,45.2587455617123,41.244763762485,41.1049511862385,25.6833925112498,18.9006300064906,35.1250538514892,35.7982503097522,31.0656187051092,29.0604573235695,48.2820096815248,36.1955244198764,23.3382448385562,28.0881637921496,19.8550989126015,20.224452229947,15.0405591784393,21.1806678330598,20.2157769411038,19.010947491768,20.5602712110823,17.0427543595186,19.079495416651,16.8285924039947,21.9095097990214,14.6014250690518,15.8185560780238,14.4230065281157,20.9022466590844,19.8864166383541,17.5701048097744,16.4520971063651,19.912459078629,18.0690010397435,19.0382867756272,17.0123014771678,17.0995312434598,16.4322977753493,17.9565526930476,15.4225523561426,14.0861409797056,17.5969348562966,17.9726735775721,14.0821826016233,27.9787847290499,15.2055545489515,8.37997110788363,4.20834330551455,2.20591419119516,3.70988536992674
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0,0,2.61630187656536,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,65.5505333185097,69.8268092639083,74.7921056137291,0,0,0,0,0,0.599200221036809,0,93.6317199145553,62.3727435092411,71.3001618981185,21.7094748146891,20.0990372265968,70.1872279501687,43.3221529002428,53.3146896233812,63.8672109796454,55.6716794051418,71.4270379641532,69.1084147706216,58.5520919055422,74.4906119896167,61.4202597803038,55.7134983931363,48.7426410408024,50.3814881159972,57.9452740852349,76.9829711258491,2.34751199332871,5.97015324843606,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,3.23939865486365,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0,0,1.02765491747154,0,1.48442139064825,10.0621489524359,14.3098774806706,8.76338889573022,11.6056433225519,7.87844337809222,0.753999547978053,0,0.144599356919912,0,0.647067399789637,0,0,0,11.4184510834503,12.7762491156208,0,0,0,0,61.4141621559773,26.992535566299,42.596825366261,40.848715245185,34.2658712822643,74.3881199523225,43.4806585021591,0.611036183101898,0,0,1.89397670297827,9.36867189331467,16.0931473103431,21.2473313170312,20.1944455899858,9.66118287948856,12.811372028485,10.1197862524507,6.46758426847539,1.5089759505299,3.21480336285293,3.51902248327898,1.31517439456545,1.94633074457919,1.0447564995665,0.411564272815887,2.58744546864041,0,0,0,1.03562886267751,2.57978665979206,0.900310307305074,1.18372367792605,0.590292695242212,1.07986979021165,0.465067889500816,0,0.350296027101508,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.658650345873152,0.402619256281115,30.2817525932343,78.2075054082562,0,0,4.90562976231038,5.34144345279009,4.63922860759536,2.21851877085677,2.00140239460383,1.52180500890047,0,0.658795818896044,1.00534083520108,0,0.58489226135736,0,0,0.199141273254367,1.89667900953082,4.45569199177942,1.1270773567308,1.83286195060783,0.581857461502877,1.05203729835478,0,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,5.11626811780309,2.28150967018836,1.52770577197669,0.469380496577004,0.837531287209079,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,0.478364305972461,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0,0,78.6697890940181,64.9352743720806,7.70494243270374,0.252470927204373,7.88770548540642,10.1514073517126,11.8482868753039,5.73525115086125,12.0311284004493,9.34152551603147,7.69140333182299,10.8134667427185,8.30104333687699,27.9549545286972,0.99358059645788,1.06839362200353,0.81443479676788,0.164970122972535,0,2.6705869977048,1.81394134178851,1.32023555829129,0.295301892880773,1.53717573971964,1.55056975900933,0.363533729477506,0,0.632073515871632,1.05418608574999,1.03135543248187,13.2771446243977,10.8036656418786,3.88076051348264,9.21649250635847,11.8817956540323,10.8804978737263,13.3284706687718,4.26250928760439,0.23467170806371,0.21183207086382,3.30792597082443,0.32977250588296,0,0.120625849856312,0,0,0,63.0446026835733,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,3.95419991976419,4.87966721104437,3.67218158794124,1.88179466413022,2.40198820120795,1.34864346384821,0.909188012978695,0.26175594198403,0,0,0.56369293868419,2.24274819065968,2.15096037594227,1.16670713006429,2.58319646955462,3.54807863530634,2.58185925020659,0.39061315453185,1.04859344425711,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0.167884616364078,1.54551675225752,0,0.549454872801795,1.07184189539533,0,31.6261031865557,39.5879703396172,45.2587455617123,41.244763762485,41.1049511862385,25.6833925112498,18.9006300064906,35.1250538514892,35.7982503097522,31.0656187051092,29.0604573235695,48.2820096815248,36.1955244198764,23.3382448385562,28.0881637921496,19.8550989126015,20.224452229947,15.0405591784393,21.1806678330598,20.2157769411038,19.010947491768,20.5602712110823,17.0427543595186,19.079495416651,16.8285924039947,21.9095097990214,14.6014250690518,15.8185560780238,14.4230065281157,20.9022466590844,19.8864166383541,17.5701048097744,16.4520971063651,19.912459078629,18.0690010397435,19.0382867756272,17.0123014771678,17.0995312434598,16.4322977753493,17.9565526930476,15.4225523561426,14.0861409797056,17.5969348562966,17.9726735775721,14.0821826016233,27.9787847290499,15.2055545489515,8.37997110788363,4.20834330551455,2.20591419119516,3.70988536992674
|short_description=p1@Elavl2
}}
}}

Latest revision as of 07:07, 27 September 2015

Short description:p1@Elavl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Elavl2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000107109, ENSMUST00000107111, ENSMUST00000107120_5end
EntrezGene:Elavl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Elavl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C365.55
Mouse Granule cells, donor2.CNhs12357.11731-123E369.83
Mouse Granule cells, donor3.CNhs12108.11636-122C774.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D593.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F562.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D971.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D270.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F243.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D653.31
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D363.87
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D771.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F458.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D874.49
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E461.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E555.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E176.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F95.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C17.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A461.41
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F142.60
cortex, adult.CNhs10473.12-14D540.85
cortex, neonate N30.CNhs11107.1392-42F234.27
diencephalon, adult.CNhs10482.20-12F274.39
diencephalon, neonate N30.CNhs11201.1388-42B243.48
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C69.37
eyeball, embryo E14.CNhs10521.399-16E216.09
eyeball, embryo E15.CNhs10593.426-16C921.25
eyeball, embryo E17.CNhs11023.1261-18D420.19
eyeball, neonate N00.CNhs11207.633-15C69.66
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E830.28
hippocampus, neonate N00.CNhs11228.627-43G178.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C278.67
medulla oblongata, neonate N30.CNhs11200.1396-42A364.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I927.95
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F610.88
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C963.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.07
whole body, embryo E11.CNhs11014.324-5I829.06
whole body, embryo E12.CNhs10587.857-27C948.28
whole body, embryo E13.CNhs10512.372-23H236.20
whole body, embryo E14.5.CNhs10578.420-27D223.34
whole body, embryo E14.CNhs10519.395-14B128.09
whole body, embryo E16.CNhs10514.453-14F219.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.97
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I527.98
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.19e-1833
neuronal stem cell3.19e-1833
neuroblast3.19e-1833
electrically signaling cell3.19e-1833
CNS neuron (sensu Vertebrata)2.90e-1723
neuroblast (sensu Vertebrata)2.90e-1723
electrically responsive cell3.49e-1439
electrically active cell3.49e-1439
ectodermal cell1.65e-1244
neurectodermal cell1.65e-1244
neural cell1.95e-1243

Uber anatomy
Ontology termp-valuen
nervous system5.10e-2975
central nervous system8.34e-2973
neurectoderm5.30e-2864
neural plate5.30e-2864
presumptive neural plate5.30e-2864
regional part of nervous system2.74e-2654
ectoderm-derived structure6.40e-2595
ectoderm6.40e-2595
presumptive ectoderm6.40e-2595
neural tube1.02e-2452
neural rod1.02e-2452
future spinal cord1.02e-2452
neural keel1.02e-2452
ecto-epithelium1.43e-2273
pre-chordal neural plate8.28e-2249
brain3.16e-2147
future brain3.16e-2147
regional part of brain1.15e-2046
anterior neural tube1.56e-1940
gray matter3.78e-1934
regional part of forebrain8.17e-1939
forebrain8.17e-1939
future forebrain8.17e-1939
structure with developmental contribution from neural crest2.41e-1892
brain grey matter5.16e-1629
regional part of telencephalon5.16e-1629
telencephalon5.16e-1629
cerebral cortex1.03e-1021
cerebral hemisphere1.03e-1021
pallium1.03e-1021
regional part of cerebral cortex5.35e-0817
occipital lobe9.08e-0710
visual cortex9.08e-0710
neocortex9.08e-0710
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