Personal tools

FFCP PHASE1:Mm9::chr18:43219072..43219120,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr18:43219072..43219120,- |short_description=p2@Ppp2r2b |description=CAGE_peak_2_at_Ppp2r2b_5end |association_with_transcript=4bp_to_ENSMUST00000025377,NM_0283...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:43219072..43219120,-
|DHSsupport=NA
|short_description=p2@Ppp2r2b
|DPIdataset=NA
|description=CAGE_peak_2_at_Ppp2r2b_5end
|association_with_transcript=4bp_to_ENSMUST00000025377,NM_028392,uc008euc.1_5end
|EntrezGene=72930
|EntrezGene=72930
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6ZWR4
|UniProt=Q6ZWR4
|association_with_transcript=4bp_to_ENSMUST00000025377,NM_028392,uc008euc.1_5end
|cluster_id=chr18:43219072..43219120,-
|description=CAGE_peak_2_at_Ppp2r2b_5end
|id=chr18:43219072..43219120,-
|ontology_enrichment_celltype=CL:0000540!3.54e-14!33;CL:0000047!3.54e-14!33;CL:0000031!3.54e-14!33;CL:0000404!3.54e-14!33;CL:0000221!2.99e-10!44;CL:0000133!2.99e-10!44;CL:0000393!9.46e-10!39;CL:0000211!9.46e-10!39;CL:0002319!1.02e-09!43;CL:0000117!1.11e-08!23;CL:0000337!1.11e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-15,33;CL:0000047,1.05e-15,33;CL:0000031,1.05e-15,33;CL:0000404,1.05e-15,33;CL:0000221,2.23e-12,44;CL:0000133,2.23e-12,44;CL:0000393,6.38e-12,39;CL:0000211,6.38e-12,39;CL:0002319,1.23e-11,43;CL:0000107,1.11e-08,9;CL:0000117,2.85e-08,23;CL:0000337,2.85e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.29e-28!75;UBERON:0001016!1.29e-28!75;UBERON:0001017!2.89e-28!73;UBERON:0005743!2.89e-28!73;UBERON:0004121!2.65e-25!102;UBERON:0000924!2.65e-25!102;UBERON:0006601!2.65e-25!102;UBERON:0002346!1.30e-21!71;UBERON:0003075!1.30e-21!71;UBERON:0007284!1.30e-21!71;UBERON:0001049!2.68e-20!52;UBERON:0005068!2.68e-20!52;UBERON:0006241!2.68e-20!52;UBERON:0007135!2.68e-20!52;UBERON:0000033!4.73e-19!63;UBERON:0000955!6.13e-19!50;UBERON:0006238!6.13e-19!50;UBERON:0002616!2.32e-18!49;UBERON:0003080!3.08e-16!40;UBERON:0003056!1.15e-15!49;UBERON:0002780!1.63e-15!39;UBERON:0001890!1.63e-15!39;UBERON:0006240!1.63e-15!39;UBERON:0002020!4.19e-14!34;UBERON:0002791!2.82e-11!29;UBERON:0003528!2.82e-11!29;UBERON:0001893!2.82e-11!29;UBERON:0002021!8.98e-09!10;UBERON:0000411!8.98e-09!10;UBERON:0001950!8.98e-09!10;UBERON:0007811!3.98e-08!86;UBERON:0002619!9.46e-08!17;UBERON:0000956!9.80e-08!21;UBERON:0001869!9.80e-08!21;UBERON:0000203!9.80e-08!21;UBERON:0000153!2.08e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-35,73;UBERON:0001016,2.50e-35,75;UBERON:0004121,3.40e-27,95;UBERON:0000924,3.40e-27,95;UBERON:0006601,3.40e-27,95;UBERON:0000073,1.15e-24,54;UBERON:0001049,4.14e-23,52;UBERON:0005068,4.14e-23,52;UBERON:0006241,4.14e-23,52;UBERON:0007135,4.14e-23,52;UBERON:0002346,5.74e-22,64;UBERON:0003075,5.74e-22,64;UBERON:0007284,5.74e-22,64;UBERON:0010371,8.34e-20,73;UBERON:0000955,1.02e-18,47;UBERON:0006238,1.02e-18,47;UBERON:0002616,5.92e-18,46;UBERON:0003080,1.38e-17,40;UBERON:0002780,1.29e-16,39;UBERON:0001890,1.29e-16,39;UBERON:0006240,1.29e-16,39;UBERON:0002020,2.36e-16,34;UBERON:0003056,2.10e-14,49;UBERON:0010314,4.68e-14,92;UBERON:0003528,1.95e-12,29;UBERON:0002791,1.95e-12,29;UBERON:0001893,1.95e-12,29;UBERON:0002021,4.06e-12,10;UBERON:0000411,4.06e-12,10;UBERON:0001950,4.06e-12,10;UBERON:0002619,1.46e-09,17;UBERON:0002410,1.11e-08,9;UBERON:0000956,2.19e-08,21;UBERON:0001869,2.19e-08,21;UBERON:0000203,2.19e-08,21;UBERON:0000010,7.56e-08,11
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.26766280701236,0,0,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,9.14083150092171,8.83474163806454,1.10241719293459,0.287536413054709,0.919218786610021,7.70811166995721,16.4716666129892,15.3606533256243,0.791317726381163,1.09785172322892,1.56274011167028,18.1468949350898,16.8828783009504,18.488587980994,10.0173719061047,14.8066548031067,5.96478226640962,0.37863096666592,1.13357340160178,0,0,0,0,0,0,1.12355536105401,0,0,0,15.9153064347649,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0.173485326766136,0,0.461230994512117,1.65794904607885,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,3.72783522436244,0.878342391034642,1.46612694769419,0.255457055208591,0,0,0,35.500381538943,24.7050325522058,3.01570445070875,43.2822557278768,46.5402132341202,19.9476522777178,22.7137768294861,0.101839363850316,0.373220911830279,0.758168275301024,1.26265113531884,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.768682321709099,0.749613796477831,2.58703370739016,0,1.51284864134255,0.175951124163949,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,30.2817525932343,5.45394445610208,0,0.264450566663544,0.213288250535234,0.928946687441754,0,0.605050573870028,0.444756087689741,0.760902504450237,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,42.0642545768015,31.2955203201182,0,0,4.41711507182759,4.68526493155966,3.87762115919038,13.3822526853429,20.7202766896627,13.587673477864,8.50102473517278,10.8134667427185,14.6256477840214,6.42642632843614,0,0.35613120733451,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0,0.632073515871632,0,0,8.85142974959849,1.44048875225048,0.646793418913773,0.857348140126369,1.95074257006501,3.21063871683727,6.08831376227848,2.13125464380219,0,0,1.32317038832977,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,51.1773833549007,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.756037385752609,0.627264888043406,0.655087691238533,0.404593039154462,0.909188012978695,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,1.54551675225752,0,0,0.214368379079066,0,35.5793660848752,32.6830917920096,36.6653128601214,38.3232596626423,32.8839609489908,40.0358765616541,35.1011700120539,32.4231266321439,39.4233895816258,33.6544202638683,0.726511433089237,0.798049746802062,2.39027048055788,1.70174701947806,2.09613162627982,1.65459157605013,1.33348036680969,1.03017528619447,1.92551525755089,0.505394423527595,3.04175159868288,0.754505365544305,1.49826411951812,1.6646539625266,1.55075766180156,0.952587382566147,1.15884325944855,2.12200142510076,2.47251540481984,1.76638704161277,0.342869252385415,2.12970967391205,1.1921809497366,1.0174249164263,1.50575008664529,1.77690676572521,1.64635175585495,0,1.22223702461276,1.12228454331548,1.42362021749009,0.788035859004508,3.6830793885272,0.929621047115796,0.964533054905707,0.999242311751784,1.40358965067245,2.36358159453128,2.48674831689496,0.661774257358546,1.85494268496337
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.26766280701236,0,0,0,0,0,0,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,9.14083150092171,8.83474163806454,1.10241719293459,0.287536413054709,0.919218786610021,7.70811166995721,16.4716666129892,15.3606533256243,0.791317726381163,1.09785172322892,1.56274011167028,18.1468949350898,16.8828783009504,18.488587980994,10.0173719061047,14.8066548031067,5.96478226640962,0.37863096666592,1.13357340160178,0,0,0,0,0,0,1.12355536105401,0,0,0,15.9153064347649,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0.173485326766136,0,0.461230994512117,1.65794904607885,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,3.72783522436244,0.878342391034642,1.46612694769419,0.255457055208591,0,0,0,35.500381538943,24.7050325522058,3.01570445070875,43.2822557278768,46.5402132341202,19.9476522777178,22.7137768294861,0.101839363850316,0.373220911830279,0.758168275301024,1.26265113531884,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.768682321709099,0.749613796477831,2.58703370739016,0,1.51284864134255,0.175951124163949,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,30.2817525932343,5.45394445610208,0,0.264450566663544,0.213288250535234,0.928946687441754,0,0.605050573870028,0.444756087689741,0.760902504450237,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,42.0642545768015,31.2955203201182,0,0,4.41711507182759,4.68526493155966,3.87762115919038,13.3822526853429,20.7202766896627,13.587673477864,8.50102473517278,10.8134667427185,14.6256477840214,6.42642632843614,0,0.35613120733451,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0,0.632073515871632,0,0,8.85142974959849,1.44048875225048,0.646793418913773,0.857348140126369,1.95074257006501,3.21063871683727,6.08831376227848,2.13125464380219,0,0,1.32317038832977,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,51.1773833549007,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.756037385752609,0.627264888043406,0.655087691238533,0.404593039154462,0.909188012978695,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,1.54551675225752,0,0,0.214368379079066,0,35.5793660848752,32.6830917920096,36.6653128601214,38.3232596626423,32.8839609489908,40.0358765616541,35.1011700120539,32.4231266321439,39.4233895816258,33.6544202638683,0.726511433089237,0.798049746802062,2.39027048055788,1.70174701947806,2.09613162627982,1.65459157605013,1.33348036680969,1.03017528619447,1.92551525755089,0.505394423527595,3.04175159868288,0.754505365544305,1.49826411951812,1.6646539625266,1.55075766180156,0.952587382566147,1.15884325944855,2.12200142510076,2.47251540481984,1.76638704161277,0.342869252385415,2.12970967391205,1.1921809497366,1.0174249164263,1.50575008664529,1.77690676572521,1.64635175585495,0,1.22223702461276,1.12228454331548,1.42362021749009,0.788035859004508,3.6830793885272,0.929621047115796,0.964533054905707,0.999242311751784,1.40358965067245,2.36358159453128,2.48674831689496,0.661774257358546,1.85494268496337
|short_description=p2@Ppp2r2b
}}
}}

Latest revision as of 07:02, 27 September 2015

Short description:p2@Ppp2r2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ppp2r2b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 4bp_to_ENSMUST00000025377, NM_028392, uc008euc.1_5end
EntrezGene:Ppp2r2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ppp2r2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.50
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D543.28
cortex, neonate N30.CNhs11107.1392-42F246.54
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B222.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E830.28
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C242.06
medulla oblongata, neonate N30.CNhs11200.1396-42A331.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C951.18
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.32
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.30e-3573
nervous system2.50e-3575
ectoderm-derived structure3.40e-2795
ectoderm3.40e-2795
presumptive ectoderm3.40e-2795
regional part of nervous system1.15e-2454
neural tube4.14e-2352
neural rod4.14e-2352
future spinal cord4.14e-2352
neural keel4.14e-2352
neurectoderm5.74e-2264
neural plate5.74e-2264
presumptive neural plate5.74e-2264
ecto-epithelium8.34e-2073
brain1.02e-1847
future brain1.02e-1847
regional part of brain5.92e-1846
anterior neural tube1.38e-1740
regional part of forebrain1.29e-1639
forebrain1.29e-1639
future forebrain1.29e-1639
gray matter2.36e-1634
pre-chordal neural plate2.10e-1449
structure with developmental contribution from neural crest4.68e-1492
brain grey matter1.95e-1229
regional part of telencephalon1.95e-1229
telencephalon1.95e-1229
occipital lobe4.06e-1210
visual cortex4.06e-1210
neocortex4.06e-1210
regional part of cerebral cortex1.46e-0917
autonomic nervous system1.11e-089
cerebral cortex2.19e-0821
cerebral hemisphere2.19e-0821
pallium2.19e-0821
peripheral nervous system7.56e-0811
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:43219072..43219120,-&oldid=4298259"