FFCP PHASE1:Mm9::chr18:43059124..43059193,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72930 | |EntrezGene=72930 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1411 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000136118_5end | |association_with_transcript=0bp_to_ENSMUST00000136118_5end | ||
|cluster_id=chr18:43059124..43059193,- | |||
|description=CAGE_peak_1_at_Ppp2r2b_5end | |description=CAGE_peak_1_at_Ppp2r2b_5end | ||
|id=chr18:43059124..43059193,- | |id=chr18:43059124..43059193,- | ||
|ontology_enrichment_celltype=CL:0000540!2.18e-17!33;CL:0000047!2.18e-17!33;CL:0000031!2.18e-17!33;CL:0000404!2.18e-17!33;CL:0002319!9.23e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000117!3.16e-14!23;CL:0000337!3.16e-14!23;CL:0000393!2.16e-11!39;CL:0000211!2.16e-11!39;CL:0000055!6.78e-11!50 | |ontology_enrichment_celltype=CL:0000540!2.18e-17!33;CL:0000047!2.18e-17!33;CL:0000031!2.18e-17!33;CL:0000404!2.18e-17!33;CL:0002319!9.23e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000117!3.16e-14!23;CL:0000337!3.16e-14!23;CL:0000393!2.16e-11!39;CL:0000211!2.16e-11!39;CL:0000055!6.78e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.11e-18,33;CL:0000047,7.11e-18,33;CL:0000031,7.11e-18,33;CL:0000404,7.11e-18,33;CL:0002319,3.15e-17,43;CL:0000221,4.81e-17,44;CL:0000133,4.81e-17,44;CL:0000117,1.29e-14,23;CL:0000337,1.29e-14,23;CL:0000393,8.63e-12,39;CL:0000211,8.63e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-35!73;UBERON:0005743!1.02e-35!73;UBERON:0000073!4.63e-35!75;UBERON:0001016!4.63e-35!75;UBERON:0004121!2.30e-30!102;UBERON:0000924!2.30e-30!102;UBERON:0006601!2.30e-30!102;UBERON:0002346!3.23e-28!71;UBERON:0003075!3.23e-28!71;UBERON:0007284!3.23e-28!71;UBERON:0001049!9.35e-27!52;UBERON:0005068!9.35e-27!52;UBERON:0006241!9.35e-27!52;UBERON:0007135!9.35e-27!52;UBERON:0000955!5.43e-25!50;UBERON:0006238!5.43e-25!50;UBERON:0000033!1.84e-24!63;UBERON:0002616!2.11e-24!49;UBERON:0003056!5.84e-23!49;UBERON:0003080!1.72e-21!40;UBERON:0002780!6.23e-21!39;UBERON:0001890!6.23e-21!39;UBERON:0006240!6.23e-21!39;UBERON:0002020!3.01e-20!34;UBERON:0002791!5.75e-17!29;UBERON:0003528!5.75e-17!29;UBERON:0001893!5.75e-17!29;UBERON:0000956!5.55e-13!21;UBERON:0001869!5.55e-13!21;UBERON:0000203!5.55e-13!21;UBERON:0002619!2.42e-10!17;UBERON:0007811!1.08e-09!86;UBERON:0000153!2.40e-09!94;UBERON:0000468!9.21e-09!333;UBERON:0002021!8.02e-08!10;UBERON:0000411!8.02e-08!10;UBERON:0001950!8.02e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!1.02e-35!73;UBERON:0005743!1.02e-35!73;UBERON:0000073!4.63e-35!75;UBERON:0001016!4.63e-35!75;UBERON:0004121!2.30e-30!102;UBERON:0000924!2.30e-30!102;UBERON:0006601!2.30e-30!102;UBERON:0002346!3.23e-28!71;UBERON:0003075!3.23e-28!71;UBERON:0007284!3.23e-28!71;UBERON:0001049!9.35e-27!52;UBERON:0005068!9.35e-27!52;UBERON:0006241!9.35e-27!52;UBERON:0007135!9.35e-27!52;UBERON:0000955!5.43e-25!50;UBERON:0006238!5.43e-25!50;UBERON:0000033!1.84e-24!63;UBERON:0002616!2.11e-24!49;UBERON:0003056!5.84e-23!49;UBERON:0003080!1.72e-21!40;UBERON:0002780!6.23e-21!39;UBERON:0001890!6.23e-21!39;UBERON:0006240!6.23e-21!39;UBERON:0002020!3.01e-20!34;UBERON:0002791!5.75e-17!29;UBERON:0003528!5.75e-17!29;UBERON:0001893!5.75e-17!29;UBERON:0000956!5.55e-13!21;UBERON:0001869!5.55e-13!21;UBERON:0000203!5.55e-13!21;UBERON:0002619!2.42e-10!17;UBERON:0007811!1.08e-09!86;UBERON:0000153!2.40e-09!94;UBERON:0000468!9.21e-09!333;UBERON:0002021!8.02e-08!10;UBERON:0000411!8.02e-08!10;UBERON:0001950!8.02e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.93e-37,73;UBERON:0001016,4.27e-36,75;UBERON:0004121,1.25e-31,95;UBERON:0000924,1.25e-31,95;UBERON:0006601,1.25e-31,95;UBERON:0002346,1.46e-30,64;UBERON:0003075,1.46e-30,64;UBERON:0007284,1.46e-30,64;UBERON:0000073,9.83e-29,54;UBERON:0001049,1.56e-27,52;UBERON:0005068,1.56e-27,52;UBERON:0006241,1.56e-27,52;UBERON:0007135,1.56e-27,52;UBERON:0010371,8.53e-26,73;UBERON:0000955,5.34e-24,47;UBERON:0006238,5.34e-24,47;UBERON:0003056,1.28e-23,49;UBERON:0002616,2.12e-23,46;UBERON:0003080,4.18e-22,40;UBERON:0002780,1.58e-21,39;UBERON:0001890,1.58e-21,39;UBERON:0006240,1.58e-21,39;UBERON:0002020,8.00e-21,34;UBERON:0003528,1.93e-17,29;UBERON:0002791,1.93e-17,29;UBERON:0001893,1.93e-17,29;UBERON:0010314,1.46e-15,92;UBERON:0000956,2.47e-13,21;UBERON:0001869,2.47e-13,21;UBERON:0000203,2.47e-13,21;UBERON:0002619,1.30e-10,17;UBERON:0002021,5.14e-08,10;UBERON:0000411,5.14e-08,10;UBERON:0001950,5.14e-08,10 | |||
|phase1_expression=4.00372117761985,0.348975407639361,1.81999695755814,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,15.9881385484011,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,1.44425809875637,0.664938581433969,2.24586291888606,0,0,0,0,0,0,0,0.304130793658544,0.734187008646726,1.56478268869608,23.5467168890882,16.6961498878199,10.6936444490856,10.9189408867783,14.3752564364972,0,0,0,0,0,0,79.7126855786815,114.791042502031,96.3423733329392,3.72728985276045,4.4464739805557,0,0,0,11.085204089181,17.28982373947,203.127950512308,220.464697295651,223.78575887787,91.4083150092171,110.87600755771,99.5850197617576,70.7339576114584,105.710160460152,92.4973400394865,55.1609300528011,64.2075309011098,85.8579733123562,84.5345826886265,89.076186365206,58.62842979029,52.3369227329462,55.1601674474284,130.225834779361,102.649981856153,118.550047544891,2.12033341332915,5.66786700800891,13.9134954576805,0,0.679971333707751,0,0,0,3.37066608316204,0,0,0,5.0703631119605,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,3.53970027129086,0.517875767294343,10.6878340126674,6.24547176358089,4.26251669636998,2.7673859670727,4.22023393547343,4.11560474974967,2.76466500925286,0,2.74738778147832,0.884610551949874,2.26473589926373,1.10420759230197,1.93950101254089,1.86391761218122,22.5441213698891,22.8296910426666,0.510914110417183,0,0,0,74.1463665053872,63.1350831889705,89.0889356480209,78.9162413672935,95.893296498874,60.2585329222724,72.8463271174232,7.84163101647435,2.11491850037158,1.26361379216837,42.5092548890677,9.75903322220278,12.644615743841,9.36323074987816,9.64510834148576,11.9744238506337,20.3700815252911,22.2073087206557,131.938719076898,1.72454394346274,3.59301552318857,5.27853372491847,6.35667624039967,9.73165372289593,4.87553033131033,5.76189981942242,3.98068533636986,0,0,0,0.414251545071004,2.57978665979206,0.540186184383045,2.60419209143731,0.590292695242212,1.07986979021165,0.232533944750408,0.268273401399619,0.467061369468678,0,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,56.3577062151861,97.0390494736652,0.330418782983798,0.793351699990633,14.7168892869311,11.6118335930219,6.95884291139304,4.43703754171354,3.55804870151792,3.42406127002606,1.42358718463353,2.14108641141214,2.76468729680296,3.38226002469956,3.70431765526328,0.898819408654221,1.08069024937347,1.7922714592893,1.32767530667157,2.97046132785295,4.50830942692322,2.64746726198909,4.07300223052014,3.99774173374816,5.69128834118316,7.23289725100051,8.47793130343424,7.03363834354263,0.889357881261447,1.83529616287703,2.35870794135844,0.674586337154561,0.405720242777006,0.241177159752417,1.78238096246994,0.575392274901621,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,5.91210208533135,9.09558776498327,10.2667935158476,11.2031756611624,5.86725620721255,2.68010011906905,3.33261097240419,1.95133647857799,3.15270288212382,1.55025282754142,1.43509291791738,1.96635977658886,5.18054945597687,2.31438493730419,0,0,0.983528546038072,1.93155722413313,64.3807865851046,55.4411277581121,0,1.76729649043061,25.2406575533005,25.7689571235781,33.6060500463166,52.0951979536563,68.1763942692126,73.0337449435188,36.8377738524154,41.5003318234063,55.3402889125133,78.0810798904991,30.3751782345695,11.3961986347043,13.1938437076397,61.3688857457832,2.65490276679926,9.95400608235424,7.25576536715402,6.41257271170054,8.26845300066164,7.99331384654211,7.75284879504663,9.81541069589265,12.83390562185,5.37262488490887,5.27093042874994,4.12542172992747,23.4903327970114,37.6327686525438,40.2305506564366,35.5799478152443,34.7586857938856,43.1652538597011,43.9345885007663,26.7929155220847,0.23467170806371,0,3.74898276693435,0.65954501176592,2.26050197374268,2.29189114726992,1.55184047204077,2.29797259643086,2.91480836629851,63.0446026835733,0.683483523191411,3.09580301944834,1.48155621895769,2.0720530270516,0.820165366326151,0.686334519619568,1.01987057996313,1.39951452323658,0.552799895217695,8.59203556213602,14.8677916983134,15.4522795016405,10.4765180597147,10.8725913927524,10.2630404960703,9.97996163247673,15.2082358534618,13.6113089831695,1.16653475962614,0,0,1.04661582230785,1.32366792365678,1.16670713006429,1.42075805825504,1.35164900392623,1.29092962510329,1.95306577265925,0.419437377702843,0.241584120826006,0.288030006257865,0,2.02725215290164,3.59488350076895,3.24802057444488,0.537080087002444,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0,1.36038230169127,0,0,0,7.72758376128762,1.68914227906064,58.059064892723,9.86094543763703,39.1226241147583,137.234697755947,124.748139093445,159.837848249592,103.283762588556,120.574523479633,111.798296813676,112.728757538712,111.679658399607,103.769611657383,111.836227338393,6.33102820263478,15.5619700626402,21.1709671135126,18.4761104971903,22.8478347264501,16.7297592689513,27.1141007917971,22.8698913535173,26.3153751865289,26.0278128116711,22.8131369901216,18.4853814558355,20.1329241060247,19.7197469406997,18.264479127885,16.1939855036245,22.9450965370814,17.9405575031246,17.3076078337389,22.6686337006972,16.8005933668854,18.6349596467304,20.2670761455223,20.4938447451583,19.1983136047274,21.4921104044858,19.7562210702594,23.1501346065302,20.3706170768793,20.7622640513363,22.0661133710964,20.4889323341172,18.0061658994663,19.5220419894317,18.9048478761519,45.2157146067682,18.4805970671873,13.1071342969462,7.65153328275374,4.85301122062934,5.10109238364927 | |phase1_expression=4.00372117761985,0.348975407639361,1.81999695755814,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,15.9881385484011,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,1.44425809875637,0.664938581433969,2.24586291888606,0,0,0,0,0,0,0,0.304130793658544,0.734187008646726,1.56478268869608,23.5467168890882,16.6961498878199,10.6936444490856,10.9189408867783,14.3752564364972,0,0,0,0,0,0,79.7126855786815,114.791042502031,96.3423733329392,3.72728985276045,4.4464739805557,0,0,0,11.085204089181,17.28982373947,203.127950512308,220.464697295651,223.78575887787,91.4083150092171,110.87600755771,99.5850197617576,70.7339576114584,105.710160460152,92.4973400394865,55.1609300528011,64.2075309011098,85.8579733123562,84.5345826886265,89.076186365206,58.62842979029,52.3369227329462,55.1601674474284,130.225834779361,102.649981856153,118.550047544891,2.12033341332915,5.66786700800891,13.9134954576805,0,0.679971333707751,0,0,0,3.37066608316204,0,0,0,5.0703631119605,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,3.53970027129086,0.517875767294343,10.6878340126674,6.24547176358089,4.26251669636998,2.7673859670727,4.22023393547343,4.11560474974967,2.76466500925286,0,2.74738778147832,0.884610551949874,2.26473589926373,1.10420759230197,1.93950101254089,1.86391761218122,22.5441213698891,22.8296910426666,0.510914110417183,0,0,0,74.1463665053872,63.1350831889705,89.0889356480209,78.9162413672935,95.893296498874,60.2585329222724,72.8463271174232,7.84163101647435,2.11491850037158,1.26361379216837,42.5092548890677,9.75903322220278,12.644615743841,9.36323074987816,9.64510834148576,11.9744238506337,20.3700815252911,22.2073087206557,131.938719076898,1.72454394346274,3.59301552318857,5.27853372491847,6.35667624039967,9.73165372289593,4.87553033131033,5.76189981942242,3.98068533636986,0,0,0,0.414251545071004,2.57978665979206,0.540186184383045,2.60419209143731,0.590292695242212,1.07986979021165,0.232533944750408,0.268273401399619,0.467061369468678,0,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,56.3577062151861,97.0390494736652,0.330418782983798,0.793351699990633,14.7168892869311,11.6118335930219,6.95884291139304,4.43703754171354,3.55804870151792,3.42406127002606,1.42358718463353,2.14108641141214,2.76468729680296,3.38226002469956,3.70431765526328,0.898819408654221,1.08069024937347,1.7922714592893,1.32767530667157,2.97046132785295,4.50830942692322,2.64746726198909,4.07300223052014,3.99774173374816,5.69128834118316,7.23289725100051,8.47793130343424,7.03363834354263,0.889357881261447,1.83529616287703,2.35870794135844,0.674586337154561,0.405720242777006,0.241177159752417,1.78238096246994,0.575392274901621,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,5.91210208533135,9.09558776498327,10.2667935158476,11.2031756611624,5.86725620721255,2.68010011906905,3.33261097240419,1.95133647857799,3.15270288212382,1.55025282754142,1.43509291791738,1.96635977658886,5.18054945597687,2.31438493730419,0,0,0.983528546038072,1.93155722413313,64.3807865851046,55.4411277581121,0,1.76729649043061,25.2406575533005,25.7689571235781,33.6060500463166,52.0951979536563,68.1763942692126,73.0337449435188,36.8377738524154,41.5003318234063,55.3402889125133,78.0810798904991,30.3751782345695,11.3961986347043,13.1938437076397,61.3688857457832,2.65490276679926,9.95400608235424,7.25576536715402,6.41257271170054,8.26845300066164,7.99331384654211,7.75284879504663,9.81541069589265,12.83390562185,5.37262488490887,5.27093042874994,4.12542172992747,23.4903327970114,37.6327686525438,40.2305506564366,35.5799478152443,34.7586857938856,43.1652538597011,43.9345885007663,26.7929155220847,0.23467170806371,0,3.74898276693435,0.65954501176592,2.26050197374268,2.29189114726992,1.55184047204077,2.29797259643086,2.91480836629851,63.0446026835733,0.683483523191411,3.09580301944834,1.48155621895769,2.0720530270516,0.820165366326151,0.686334519619568,1.01987057996313,1.39951452323658,0.552799895217695,8.59203556213602,14.8677916983134,15.4522795016405,10.4765180597147,10.8725913927524,10.2630404960703,9.97996163247673,15.2082358534618,13.6113089831695,1.16653475962614,0,0,1.04661582230785,1.32366792365678,1.16670713006429,1.42075805825504,1.35164900392623,1.29092962510329,1.95306577265925,0.419437377702843,0.241584120826006,0.288030006257865,0,2.02725215290164,3.59488350076895,3.24802057444488,0.537080087002444,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0,1.36038230169127,0,0,0,7.72758376128762,1.68914227906064,58.059064892723,9.86094543763703,39.1226241147583,137.234697755947,124.748139093445,159.837848249592,103.283762588556,120.574523479633,111.798296813676,112.728757538712,111.679658399607,103.769611657383,111.836227338393,6.33102820263478,15.5619700626402,21.1709671135126,18.4761104971903,22.8478347264501,16.7297592689513,27.1141007917971,22.8698913535173,26.3153751865289,26.0278128116711,22.8131369901216,18.4853814558355,20.1329241060247,19.7197469406997,18.264479127885,16.1939855036245,22.9450965370814,17.9405575031246,17.3076078337389,22.6686337006972,16.8005933668854,18.6349596467304,20.2670761455223,20.4938447451583,19.1983136047274,21.4921104044858,19.7562210702594,23.1501346065302,20.3706170768793,20.7622640513363,22.0661133710964,20.4889323341172,18.0061658994663,19.5220419894317,18.9048478761519,45.2157146067682,18.4805970671873,13.1071342969462,7.65153328275374,4.85301122062934,5.10109238364927 | ||
|short_description=p1@Ppp2r2b | |short_description=p1@Ppp2r2b | ||
}} | }} |
Latest revision as of 07:01, 27 September 2015
Short description: | p1@Ppp2r2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp2r2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1411 |
Association with transcript: | 0bp_to_ENSMUST00000136118_5end |
EntrezGene: | Ppp2r2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.11e-18 | 33 |
neuronal stem cell | 7.11e-18 | 33 |
neuroblast | 7.11e-18 | 33 |
electrically signaling cell | 7.11e-18 | 33 |
neural cell | 3.15e-17 | 43 |
ectodermal cell | 4.81e-17 | 44 |
neurectodermal cell | 4.81e-17 | 44 |
CNS neuron (sensu Vertebrata) | 1.29e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-14 | 23 |
electrically responsive cell | 8.63e-12 | 39 |
electrically active cell | 8.63e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.93e-37 | 73 |
nervous system | 4.27e-36 | 75 |
ectoderm-derived structure | 1.25e-31 | 95 |
ectoderm | 1.25e-31 | 95 |
presumptive ectoderm | 1.25e-31 | 95 |
neurectoderm | 1.46e-30 | 64 |
neural plate | 1.46e-30 | 64 |
presumptive neural plate | 1.46e-30 | 64 |
regional part of nervous system | 9.83e-29 | 54 |
neural tube | 1.56e-27 | 52 |
neural rod | 1.56e-27 | 52 |
future spinal cord | 1.56e-27 | 52 |
neural keel | 1.56e-27 | 52 |
ecto-epithelium | 8.53e-26 | 73 |
brain | 5.34e-24 | 47 |
future brain | 5.34e-24 | 47 |
pre-chordal neural plate | 1.28e-23 | 49 |
regional part of brain | 2.12e-23 | 46 |
anterior neural tube | 4.18e-22 | 40 |
regional part of forebrain | 1.58e-21 | 39 |
forebrain | 1.58e-21 | 39 |
future forebrain | 1.58e-21 | 39 |
gray matter | 8.00e-21 | 34 |
brain grey matter | 1.93e-17 | 29 |
regional part of telencephalon | 1.93e-17 | 29 |
telencephalon | 1.93e-17 | 29 |
structure with developmental contribution from neural crest | 1.46e-15 | 92 |
cerebral cortex | 2.47e-13 | 21 |
cerebral hemisphere | 2.47e-13 | 21 |
pallium | 2.47e-13 | 21 |
regional part of cerebral cortex | 1.30e-10 | 17 |
occipital lobe | 5.14e-08 | 10 |
visual cortex | 5.14e-08 | 10 |
neocortex | 5.14e-08 | 10 |