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FFCP PHASE1:Mm9::chr8:106919773..106919786,-: Difference between revisions

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{{FFCP|EntrezGene=97487|HGNC=|UniProt=Q8CJ61|association_with_transcript=-66bp_to_NM_153582_5end|description=CAGE_peak_2_at_Cmtm4_5end|id=chr8:106919773..106919786,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,7.66e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.71e-12!52;UBERON:0005068!9.71e-12!52;UBERON:0006241!9.71e-12!52;UBERON:0007135!9.71e-12!52;UBERON:0002346!1.24e-10!71;UBERON:0003075!1.24e-10!71;UBERON:0007284!1.24e-10!71;UBERON:0002020!6.91e-10!34;UBERON:0003080!1.58e-09!40;UBERON:0000073!2.70e-09!75;UBERON:0001016!2.70e-09!75;UBERON:0002616!3.00e-09!49;UBERON:0002780!3.79e-09!39;UBERON:0001890!3.79e-09!39;UBERON:0006240!3.79e-09!39;UBERON:0001017!6.23e-09!73;UBERON:0005743!6.23e-09!73;UBERON:0003056!7.03e-09!49;UBERON:0000955!1.37e-08!50;UBERON:0006238!1.37e-08!50;UBERON:0004121!1.96e-08!102;UBERON:0000924!1.96e-08!102;UBERON:0006601!1.96e-08!102;UBERON:0000033!5.21e-08!63;UBERON:0002791!2.38e-07!29;UBERON:0003528!2.38e-07!29;UBERON:0001893!2.38e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.07e-12,54;UBERON:0001049,8.13e-11,52;UBERON:0005068,8.13e-11,52;UBERON:0006241,8.13e-11,52;UBERON:0007135,8.13e-11,52;UBERON:0002020,3.60e-10,34;UBERON:0002346,1.08e-08,64;UBERON:0003075,1.08e-08,64;UBERON:0007284,1.08e-08,64;UBERON:0001016,1.11e-08,75;UBERON:0001017,3.20e-08,73;UBERON:0002616,3.69e-08,46;UBERON:0003080,4.03e-08,40;UBERON:0000955,8.48e-08,47;UBERON:0006238,8.48e-08,47;UBERON:0002780,1.18e-07,39;UBERON:0001890,1.18e-07,39;UBERON:0006240,1.18e-07,39;UBERON:0003056,4.51e-07,49;UBERON:0004121,5.54e-07,95;UBERON:0000924,5.54e-07,95;UBERON:0006601,5.54e-07,95;UBERON:0010371,6.29e-07,73;UBERON:0003528,6.76e-07,29;UBERON:0002791,6.76e-07,29;UBERON:0001893,6.76e-07,29|phase1_expression=0.80074423552397,2.09385244583617,5.45999087267443,2.41971369045464,1.50268718983904,1.6787927191189,1.63528848416868,0,0.140788722151667,0.468129052643987,0,0.398860794976682,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,1.11994695955385,1.83527424853736,3.44539178469012,2.58457197695445,1.50829862880122,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.506884656097573,1.28482726513177,0,1.09012578190223,1.09843091367236,0.58328969722285,0.55994568650145,0,0,0,0,0.514518872071894,0,0.515672092277442,0.809265843438391,0.528990979272033,3.1691570175309,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.39680088414724,2.30530983192933,1.34796496001021,0.945041568321835,0.420649922702764,2.28520787523043,2.20868540951614,0.979926393719632,1.0543001812006,1.83843757322004,0,1.65993539510744,1.38245879930619,1.31886287730194,1.18933936683133,0.52091337055676,1.95428099300967,1.68828783009504,1.5279824777681,2.35702868378934,1.56608848879013,1.67759501242771,1.06016670666458,1.058001841495,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0,1.06001872353102,1.54927761754349,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.5709193985953,0,0.890652834388949,1.04091196059682,0.304465478312141,1.38369298353635,0.60289056221049,0.705532242814229,0.879666139307728,2.47194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,2.1361239859187,1.21677024134594,1.02286182932132,1.0389402227978,1.1356888414743,1.12023300235348,0.497627882440372,1.0108910337347,1.05220927943237,0.650602214813519,0.459804208866946,1.26043490863744,0.60281927134286,0.408218994907967,0.896796041993948,1.68663104207512,0,0.862271971731369,1.51284864134255,1.23165786914764,0.43839146485515,1.39023624612799,0,0.823128545631774,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,1.42046841351126,0.196764231747404,1.23413690309903,0.697601834251224,1.3413670069981,0.467061369468678,0,0.32833492815819,0.648550476366846,0.292399974850665,0.439100230582101,0.268412837520744,1.05144974282064,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,0.667134131534611,1.33157938278791,0,0.658795818896044,0.502670417600539,0.795825888164603,0.38992817423824,1.79763881730844,1.72910439899755,0.796565093017469,1.51734320762465,0.913988100877831,1.1270773567308,1.62921062276251,1.16371492300575,1.1221731182451,2.02356918797623,0.738050739898011,1.255989822731,0.740382983530803,0,0,0.589676985339609,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,0.651859905768103,1.01847051465113,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,0.315270288212382,0,0.478364305972461,0.655453258862952,0.518054945597687,0.14464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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=97487
|HGNC=
|TSSclassifier=NA
|UniProt=Q8CJ61
|association_with_transcript=-66bp_to_NM_153582_5end
|cluster_id=chr8:106919773..106919786,-
|description=CAGE_peak_2_at_Cmtm4_5end
|id=chr8:106919773..106919786,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000075,7.66e-07,7
|ontology_enrichment_disease=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.07e-12,54;UBERON:0001049,8.13e-11,52;UBERON:0005068,8.13e-11,52;UBERON:0006241,8.13e-11,52;UBERON:0007135,8.13e-11,52;UBERON:0002020,3.60e-10,34;UBERON:0002346,1.08e-08,64;UBERON:0003075,1.08e-08,64;UBERON:0007284,1.08e-08,64;UBERON:0001016,1.11e-08,75;UBERON:0001017,3.20e-08,73;UBERON:0002616,3.69e-08,46;UBERON:0003080,4.03e-08,40;UBERON:0000955,8.48e-08,47;UBERON:0006238,8.48e-08,47;UBERON:0002780,1.18e-07,39;UBERON:0001890,1.18e-07,39;UBERON:0006240,1.18e-07,39;UBERON:0003056,4.51e-07,49;UBERON:0004121,5.54e-07,95;UBERON:0000924,5.54e-07,95;UBERON:0006601,5.54e-07,95;UBERON:0010371,6.29e-07,73;UBERON:0003528,6.76e-07,29;UBERON:0002791,6.76e-07,29;UBERON:0001893,6.76e-07,29
|phase1_expression=0.80074423552397,2.09385244583617,5.45999087267443,2.41971369045464,1.50268718983904,1.6787927191189,1.63528848416868,0,0.140788722151667,0.468129052643987,0,0.398860794976682,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,1.11994695955385,1.83527424853736,3.44539178469012,2.58457197695445,1.50829862880122,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.506884656097573,1.28482726513177,0,1.09012578190223,1.09843091367236,0.58328969722285,0.55994568650145,0,0,0,0,0.514518872071894,0,0.515672092277442,0.809265843438391,0.528990979272033,3.1691570175309,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.39680088414724,2.30530983192933,1.34796496001021,0.945041568321835,0.420649922702764,2.28520787523043,2.20868540951614,0.979926393719632,1.0543001812006,1.83843757322004,0,1.65993539510744,1.38245879930619,1.31886287730194,1.18933936683133,0.52091337055676,1.95428099300967,1.68828783009504,1.5279824777681,2.35702868378934,1.56608848879013,1.67759501242771,1.06016670666458,1.058001841495,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0,1.06001872353102,1.54927761754349,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.5709193985953,0,0.890652834388949,1.04091196059682,0.304465478312141,1.38369298353635,0.60289056221049,0.705532242814229,0.879666139307728,2.47194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,2.1361239859187,1.21677024134594,1.02286182932132,1.0389402227978,1.1356888414743,1.12023300235348,0.497627882440372,1.0108910337347,1.05220927943237,0.650602214813519,0.459804208866946,1.26043490863744,0.60281927134286,0.408218994907967,0.896796041993948,1.68663104207512,0,0.862271971731369,1.51284864134255,1.23165786914764,0.43839146485515,1.39023624612799,0,0.823128545631774,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.900310307305074,1.42046841351126,0.196764231747404,1.23413690309903,0.697601834251224,1.3413670069981,0.467061369468678,0,0.32833492815819,0.648550476366846,0.292399974850665,0.439100230582101,0.268412837520744,1.05144974282064,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,0.667134131534611,1.33157938278791,0,0.658795818896044,0.502670417600539,0.795825888164603,0.38992817423824,1.79763881730844,1.72910439899755,0.796565093017469,1.51734320762465,0.913988100877831,1.1270773567308,1.62921062276251,1.16371492300575,1.1221731182451,2.02356918797623,0.738050739898011,1.255989822731,0.740382983530803,0,0,0.589676985339609,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,0.651859905768103,1.01847051465113,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,0.315270288212382,0,0.478364305972461,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,1.28440471990234,1.75817529888305,1.47541450839008,0,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0.395287777946524,0,0.709700426041343,0.890328018336276,0.651547837414304,0.494910368917606,1.32745138339963,0.728341908464944,1.209294227859,2.07465587731488,1.18120757152309,1.53717573971964,0.775284879504663,1.81766864738753,1.06949213515416,0.632073515871632,0,1.03135543248187,1.36175842301515,1.08036656418786,0.776152102696527,0.857348140126369,2.12808280370728,1.96205699362278,0.987294123612726,0.608929898229199,1.64270195644597,10.1679394014634,0.882113592219848,0.16488625294148,0.968786560175433,0.542816324353403,0.358117032009409,0.492422699235184,0.291480836629851,0.927126510052548,0,0.82554747185289,0.185194527369712,0,0,0.457556346413045,0,0,0,2.86401185404534,1.10717597753397,0.813277868507395,1.18805874903981,0.418176592028937,1.52853794622324,0.944050424693745,0.578574190077352,0.26175594198403,1.55537967950151,0.621339313086926,0,0.598066184175915,1.65458490457098,0.388902376688095,1.29159823477731,0.844780627453891,0.938857909166032,1.3020438484395,1.04859344425711,0,0.864090018773596,0.316011120628178,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,1.99787358036658,1.16628013592318,1.17519231454855,1.35232715822533,0.375364950902364,1.09890974560359,1.07184189539533,1.00314420807073,1.6942555278512,1.38097570952153,2.29158205375759,1.71853182343688,2.74033007908257,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,1.55328093525546,0.93408612825759,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,1.11123363900808,0.206035057238894,0.64183841918363,1.51618327058278,1.01391719956096,0.754505365544305,1.12369808963859,0.704276676453562,0.976402972245426,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.883193520806384,0.342869252385415,0.887379030796687,0.476872379894642,0.436039249896986,0.376437521661322,1.09998990259179,0.548783918618318,0.526139422875686,0,1.12228454331548,1.18635018124174,0.788035859004508,0,0.929621047115796,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0,0.695603506861264
|short_description=p2@Cmtm4
}}

Latest revision as of 06:43, 27 September 2015

Short description:p2@Cmtm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cmtm4_5end
Coexpression cluster:NA
Association with transcript: -66bp_to_NM_153582_5end
EntrezGene:Cmtm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cmtm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
columnar/cuboidal epithelial cell7.66e-077

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.07e-1254
neural tube8.13e-1152
neural rod8.13e-1152
future spinal cord8.13e-1152
neural keel8.13e-1152
gray matter3.60e-1034
neurectoderm1.08e-0864
neural plate1.08e-0864
presumptive neural plate1.08e-0864
nervous system1.11e-0875
central nervous system3.20e-0873
regional part of brain3.69e-0846
anterior neural tube4.03e-0840
brain8.48e-0847
future brain8.48e-0847
regional part of forebrain1.18e-0739
forebrain1.18e-0739
future forebrain1.18e-0739
pre-chordal neural plate4.51e-0749
ectoderm-derived structure5.54e-0795
ectoderm5.54e-0795
presumptive ectoderm5.54e-0795
ecto-epithelium6.29e-0773
brain grey matter6.76e-0729
regional part of telencephalon6.76e-0729
telencephalon6.76e-0729
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