FFCP PHASE1:Mm9::chr1:59176923..59176979,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381259 | |EntrezGene=381259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=463 | |||
|TSSclassifier=NA | |||
|UniProt=B2RVK7 | |UniProt=B2RVK7 | ||
|association_with_transcript=0bp_to_ENSMUST00000094917,NM_001033449,uc007bde.1_5end | |association_with_transcript=0bp_to_ENSMUST00000094917,NM_001033449,uc007bde.1_5end | ||
|cluster_id=chr1:59176923..59176979,- | |||
|description=CAGE_peak_2_at_Als2cr4_5end | |description=CAGE_peak_2_at_Als2cr4_5end | ||
|id=chr1:59176923..59176979,- | |id=chr1:59176923..59176979,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!9.76e-12!49;UBERON:0000033!2.99e-11!63;UBERON:0002346!1.56e-10!71;UBERON:0003075!1.56e-10!71;UBERON:0007284!1.56e-10!71;UBERON:0003080!3.43e-09!40;UBERON:0002780!5.76e-09!39;UBERON:0001890!5.76e-09!39;UBERON:0006240!5.76e-09!39;UBERON:0004121!6.22e-09!102;UBERON:0000924!6.22e-09!102;UBERON:0006601!6.22e-09!102;UBERON:0000955!1.72e-08!50;UBERON:0006238!1.72e-08!50;UBERON:0002616!4.39e-08!49;UBERON:0001049!1.12e-07!52;UBERON:0005068!1.12e-07!52;UBERON:0006241!1.12e-07!52;UBERON:0007135!1.12e-07!52;UBERON:0002619!8.99e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,9.63e-12,49;UBERON:0010371,6.55e-10,73;UBERON:0000955,1.55e-09,47;UBERON:0006238,1.55e-09,47;UBERON:0002346,2.66e-09,64;UBERON:0003075,2.66e-09,64;UBERON:0007284,2.66e-09,64;UBERON:0003080,3.68e-09,40;UBERON:0002616,4.23e-09,46;UBERON:0002780,6.24e-09,39;UBERON:0001890,6.24e-09,39;UBERON:0006240,6.24e-09,39;UBERON:0004121,6.28e-08,95;UBERON:0000924,6.28e-08,95;UBERON:0006601,6.28e-08,95;UBERON:0010314,1.58e-07,92;UBERON:0001049,1.85e-07,52;UBERON:0005068,1.85e-07,52;UBERON:0006241,1.85e-07,52;UBERON:0007135,1.85e-07,52;UBERON:0002619,7.20e-07,17;UBERON:0000073,8.96e-07,54 | |||
|phase1_expression=5.60520964866779,0.348975407639361,0.909998478779072,0.30246421130683,0,0.839396359559449,0.934450562382103,0.258246646883153,0.985521055061667,0.468129052643987,0.856089841127525,0.239316476986009,0,0.0874204024189974,0,0.404950534779652,1.39912375625629,0.473193248037357,0.685572168028694,0,3.74190476664707,0.893618560807968,1.04479915655574,1.59992422793407,0.91763712426868,0.57423196411502,0,0.430942465371778,0.950117097281869,0.252030129759931,0.665191531965914,1.90509202037889,0.61506478758457,0,0.866554859253824,0.664938581433969,2.04169356262369,0,0.7813353445238,0.523523743973798,0,0,0,1.51076181570693,1.92616169317078,2.20256102594018,0.782391344348039,3.70642765846759,5.71184075109627,3.69416808241138,2.93971485413261,5.75010257459886,0.335565212115473,0,0.672187598284928,0.514518872071894,2.0057340795713,1.03134418455488,2.02316460859598,0.528990979272033,0.633831403506179,1.35537812827653,1.77858959222228,0.899899717281399,0,0,2.39680088414724,1.92109152660777,1.24427534770173,0.945041568321835,1.47227472945967,1.42825492201902,1.76694832761291,1.5923803897944,2.01275489138296,1.83843757322004,1.10115880999389,1.14918604276669,1.22885226604995,2.2420668914133,2.01272815925301,1.56274011167028,1.11673199600552,1.12552522006336,2.44477196442896,1.17851434189467,2.27794689278565,0.931997229126503,3.02904773332736,2.26714680320357,1.44932244350839,0.860423876981386,0.679971333707751,0,0,0,0.702222100658759,2.38602451609281,2.07828803682295,1.41335829804136,7.88723150749411,5.13305909657271,0,7.11066703153331,0.649473123033642,1.01343946190039,0,0.91347103775248,1.03575153458869,2.52351636410202,3.29622120855658,3.34912026143355,1.84492397804847,2.56228488939458,2.93971767839262,3.26733137457156,2.22475470960936,1.3013942122792,0,2.42650274921114,1.76673214768315,0,0,2.63502717310392,2.30391377494801,0.255457055208591,1.55759661857696,0.599902730993408,2.03312363316904,3.14560342750128,3.20250421973039,4.14659361972453,4.86708096538374,5.8814555185976,3.1168206683934,1.94689515681309,6.00852246716866,1.24406970610093,1.76905930903572,1.05220927943237,4.81445638962004,6.20735681970377,5.94205028357652,7.38453607395004,6.66757691683013,5.63700369253339,6.74652416830048,1.03481348295606,3.66465587985832,2.08016688184601,2.99116911078713,3.5071317188412,2.50242524303038,1.0447564995665,4.11564272815887,4.37875387000685,1.40442637462647,2.83082697826187,1.98914449576915,1.03562886267751,1.87620847984877,1.44049649168812,1.18372367792605,1.37734962223183,1.23413690309903,1.16266972375204,1.3413670069981,1.16765342367169,1.81015834904829,1.47750717671186,1.21603214318784,2.04679982395465,1.09775057645525,2.14730270016595,8.41159794256509,7.30622747892919,0.330418782983798,0.793351699990633,4.26576501070468,3.48355007790658,2.70621668776396,2.42020229548011,2.44615848229357,1.52180500890047,0.474529061544512,1.4822905925161,1.50801125280162,1.1937388322469,2.14460495831032,0.898819408654221,0.864552199498777,0.796565093017469,3.41402221715547,4.34144347916969,1.1270773567308,4.48032921259691,3.10323979468201,4.9095073923223,2.27651533647326,1.91893192373483,1.8839847340965,1.48076596706161,0.592905254174298,1.16791574001266,0.982794975566015,0.899448449539415,0.608580364165509,0.964708639009667,1.52775511068852,1.72617682470486,1.62135226775035,0.549122826376163,4.31304619582064,1.48856379067401,0.936113019343682,0.757736633841335,0.538192240565737,0.964887042726734,5.72734889516475,2.84237117655727,2.28150967018836,1.52770577197669,2.34690248288502,4.52266895092903,2.85652369063216,3.51240566144038,2.67979744980525,3.5434350343804,4.30527875375215,1.96635977658886,3.10832967358612,4.05017364028232,4.52373851817817,0,0.491764273019036,1.37968373152366,2.0871576698413,3.5163505977661,1.80328439914343,1.00988370881749,2.2085575359138,1.17131623288992,1.50796378412959,1.91175038362042,1.55959071857676,0.283076530788832,1.21443210502468,2.04579100537918,1.58115111178609,5.14114106274891,3.26462195979018,4.45164009168138,6.35259141478947,2.14461159864296,0,2.6705869977048,2.72091201268276,1.88605079755898,3.2483208216885,1.53717573971964,2.84271122485043,2.90826983582004,3.92147116223193,2.52829406348653,1.05418608574999,2.06271086496374,7.48967132658334,5.76195500900193,6.07985813778946,6.21577401591618,7.09360934569094,6.59964625127661,8.39200005070817,7.91608867697958,1.87737366450968,0.847328283455281,0.441056796109924,1.6488625294148,2.74489525383039,3.01564624640779,2.50681922406587,3.11867709515616,0.874442509889552,1.48340241608408,0.854354403989263,1.65109494370578,1.85194527369712,0.565105371014073,0.683471138605126,0.686334519619568,2.88963330989554,2.37917468950219,2.3493995546752,0.954670618015114,4.58687190692646,3.25311147402958,3.99619761040665,3.55450103224597,3.27543845619266,3.77620169877498,2.81021749466142,1.30877970992015,0.90730481304255,0,31.5668045663147,2.0932316446157,3.14371131868485,2.52786544847262,3.22899558694328,4.56181538825101,3.28600268208111,4.4269490846943,5.55754525456268,9.18019659138823,23.618460513145,0.632022241256357,2.02725215290164,1.54066435747241,2.20865399062252,1.9692936523423,2.38417625737518,0.600977247599844,0.738447635872886,0.504832249740738,0.990688486514998,1.00826185136841,0.779663045918019,0.577271049841977,1.16876902181569,2.49403421976732,0.665957860122194,1.97370484540847,0.335769232728157,1.9318959403219,5.63047426353546,2.56412273974171,2.14368379079066,1.00314420807073,7.34177395402186,4.14292712856459,6.30185064783336,4.64003592327956,4.7955776383945,6.0431511791176,6.75022500231806,8.10578165803597,2.26571204492102,5.1776031175182,3.32119512269365,3.19219898720825,2.73173769206615,2.67417388775123,0.628839487883947,1.47074806760011,2.66696073361938,3.91466608753899,2.56735367673452,2.02157769411038,2.02783439912192,1.88626341386076,2.43467919421694,2.75308155340938,2.81433797882505,1.90517476513229,2.89710814862139,2.89363830695558,2.88460130562315,3.09117732282234,1.71434626192708,4.08194354166476,3.57654284920981,2.61623549938191,2.82328141245992,2.70766745253365,3.47563148458268,4.20911538300549,2.44447404922551,4.48913817326191,2.72860541685601,2.65962102414021,1.63692417267876,2.78886314134739,1.92906610981141,2.74791635731741,1.63752125911786,2.79332370262788,2.29545998482612,3.52946270591225,2.78241402744506 | |phase1_expression=5.60520964866779,0.348975407639361,0.909998478779072,0.30246421130683,0,0.839396359559449,0.934450562382103,0.258246646883153,0.985521055061667,0.468129052643987,0.856089841127525,0.239316476986009,0,0.0874204024189974,0,0.404950534779652,1.39912375625629,0.473193248037357,0.685572168028694,0,3.74190476664707,0.893618560807968,1.04479915655574,1.59992422793407,0.91763712426868,0.57423196411502,0,0.430942465371778,0.950117097281869,0.252030129759931,0.665191531965914,1.90509202037889,0.61506478758457,0,0.866554859253824,0.664938581433969,2.04169356262369,0,0.7813353445238,0.523523743973798,0,0,0,1.51076181570693,1.92616169317078,2.20256102594018,0.782391344348039,3.70642765846759,5.71184075109627,3.69416808241138,2.93971485413261,5.75010257459886,0.335565212115473,0,0.672187598284928,0.514518872071894,2.0057340795713,1.03134418455488,2.02316460859598,0.528990979272033,0.633831403506179,1.35537812827653,1.77858959222228,0.899899717281399,0,0,2.39680088414724,1.92109152660777,1.24427534770173,0.945041568321835,1.47227472945967,1.42825492201902,1.76694832761291,1.5923803897944,2.01275489138296,1.83843757322004,1.10115880999389,1.14918604276669,1.22885226604995,2.2420668914133,2.01272815925301,1.56274011167028,1.11673199600552,1.12552522006336,2.44477196442896,1.17851434189467,2.27794689278565,0.931997229126503,3.02904773332736,2.26714680320357,1.44932244350839,0.860423876981386,0.679971333707751,0,0,0,0.702222100658759,2.38602451609281,2.07828803682295,1.41335829804136,7.88723150749411,5.13305909657271,0,7.11066703153331,0.649473123033642,1.01343946190039,0,0.91347103775248,1.03575153458869,2.52351636410202,3.29622120855658,3.34912026143355,1.84492397804847,2.56228488939458,2.93971767839262,3.26733137457156,2.22475470960936,1.3013942122792,0,2.42650274921114,1.76673214768315,0,0,2.63502717310392,2.30391377494801,0.255457055208591,1.55759661857696,0.599902730993408,2.03312363316904,3.14560342750128,3.20250421973039,4.14659361972453,4.86708096538374,5.8814555185976,3.1168206683934,1.94689515681309,6.00852246716866,1.24406970610093,1.76905930903572,1.05220927943237,4.81445638962004,6.20735681970377,5.94205028357652,7.38453607395004,6.66757691683013,5.63700369253339,6.74652416830048,1.03481348295606,3.66465587985832,2.08016688184601,2.99116911078713,3.5071317188412,2.50242524303038,1.0447564995665,4.11564272815887,4.37875387000685,1.40442637462647,2.83082697826187,1.98914449576915,1.03562886267751,1.87620847984877,1.44049649168812,1.18372367792605,1.37734962223183,1.23413690309903,1.16266972375204,1.3413670069981,1.16765342367169,1.81015834904829,1.47750717671186,1.21603214318784,2.04679982395465,1.09775057645525,2.14730270016595,8.41159794256509,7.30622747892919,0.330418782983798,0.793351699990633,4.26576501070468,3.48355007790658,2.70621668776396,2.42020229548011,2.44615848229357,1.52180500890047,0.474529061544512,1.4822905925161,1.50801125280162,1.1937388322469,2.14460495831032,0.898819408654221,0.864552199498777,0.796565093017469,3.41402221715547,4.34144347916969,1.1270773567308,4.48032921259691,3.10323979468201,4.9095073923223,2.27651533647326,1.91893192373483,1.8839847340965,1.48076596706161,0.592905254174298,1.16791574001266,0.982794975566015,0.899448449539415,0.608580364165509,0.964708639009667,1.52775511068852,1.72617682470486,1.62135226775035,0.549122826376163,4.31304619582064,1.48856379067401,0.936113019343682,0.757736633841335,0.538192240565737,0.964887042726734,5.72734889516475,2.84237117655727,2.28150967018836,1.52770577197669,2.34690248288502,4.52266895092903,2.85652369063216,3.51240566144038,2.67979744980525,3.5434350343804,4.30527875375215,1.96635977658886,3.10832967358612,4.05017364028232,4.52373851817817,0,0.491764273019036,1.37968373152366,2.0871576698413,3.5163505977661,1.80328439914343,1.00988370881749,2.2085575359138,1.17131623288992,1.50796378412959,1.91175038362042,1.55959071857676,0.283076530788832,1.21443210502468,2.04579100537918,1.58115111178609,5.14114106274891,3.26462195979018,4.45164009168138,6.35259141478947,2.14461159864296,0,2.6705869977048,2.72091201268276,1.88605079755898,3.2483208216885,1.53717573971964,2.84271122485043,2.90826983582004,3.92147116223193,2.52829406348653,1.05418608574999,2.06271086496374,7.48967132658334,5.76195500900193,6.07985813778946,6.21577401591618,7.09360934569094,6.59964625127661,8.39200005070817,7.91608867697958,1.87737366450968,0.847328283455281,0.441056796109924,1.6488625294148,2.74489525383039,3.01564624640779,2.50681922406587,3.11867709515616,0.874442509889552,1.48340241608408,0.854354403989263,1.65109494370578,1.85194527369712,0.565105371014073,0.683471138605126,0.686334519619568,2.88963330989554,2.37917468950219,2.3493995546752,0.954670618015114,4.58687190692646,3.25311147402958,3.99619761040665,3.55450103224597,3.27543845619266,3.77620169877498,2.81021749466142,1.30877970992015,0.90730481304255,0,31.5668045663147,2.0932316446157,3.14371131868485,2.52786544847262,3.22899558694328,4.56181538825101,3.28600268208111,4.4269490846943,5.55754525456268,9.18019659138823,23.618460513145,0.632022241256357,2.02725215290164,1.54066435747241,2.20865399062252,1.9692936523423,2.38417625737518,0.600977247599844,0.738447635872886,0.504832249740738,0.990688486514998,1.00826185136841,0.779663045918019,0.577271049841977,1.16876902181569,2.49403421976732,0.665957860122194,1.97370484540847,0.335769232728157,1.9318959403219,5.63047426353546,2.56412273974171,2.14368379079066,1.00314420807073,7.34177395402186,4.14292712856459,6.30185064783336,4.64003592327956,4.7955776383945,6.0431511791176,6.75022500231806,8.10578165803597,2.26571204492102,5.1776031175182,3.32119512269365,3.19219898720825,2.73173769206615,2.67417388775123,0.628839487883947,1.47074806760011,2.66696073361938,3.91466608753899,2.56735367673452,2.02157769411038,2.02783439912192,1.88626341386076,2.43467919421694,2.75308155340938,2.81433797882505,1.90517476513229,2.89710814862139,2.89363830695558,2.88460130562315,3.09117732282234,1.71434626192708,4.08194354166476,3.57654284920981,2.61623549938191,2.82328141245992,2.70766745253365,3.47563148458268,4.20911538300549,2.44447404922551,4.48913817326191,2.72860541685601,2.65962102414021,1.63692417267876,2.78886314134739,1.92906610981141,2.74791635731741,1.63752125911786,2.79332370262788,2.29545998482612,3.52946270591225,2.78241402744506 | ||
|short_description=p2@Als2cr4 | |short_description=p2@Als2cr4 | ||
}} | }} |
Latest revision as of 06:30, 27 September 2015
Short description: | p2@Als2cr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Als2cr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000094917, NM_001033449, uc007bde.1_5end |
EntrezGene: | Als2cr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 9.63e-12 | 49 |
ecto-epithelium | 6.55e-10 | 73 |
brain | 1.55e-09 | 47 |
future brain | 1.55e-09 | 47 |
neurectoderm | 2.66e-09 | 64 |
neural plate | 2.66e-09 | 64 |
presumptive neural plate | 2.66e-09 | 64 |
anterior neural tube | 3.68e-09 | 40 |
regional part of brain | 4.23e-09 | 46 |
regional part of forebrain | 6.24e-09 | 39 |
forebrain | 6.24e-09 | 39 |
future forebrain | 6.24e-09 | 39 |
ectoderm-derived structure | 6.28e-08 | 95 |
ectoderm | 6.28e-08 | 95 |
presumptive ectoderm | 6.28e-08 | 95 |
structure with developmental contribution from neural crest | 1.58e-07 | 92 |
neural tube | 1.85e-07 | 52 |
neural rod | 1.85e-07 | 52 |
future spinal cord | 1.85e-07 | 52 |
neural keel | 1.85e-07 | 52 |
regional part of cerebral cortex | 7.20e-07 | 17 |
regional part of nervous system | 8.96e-07 | 54 |