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FFCP PHASE1:Mm9::chr4:86221624..86221635,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:86221624..86221635,+
|DHSsupport=NA
|short_description=p3@Rraga
|DPIdataset=NA
|description=CAGE_peak_3_at_Rraga_5end
|association_with_transcript=47bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end
|EntrezGene=68441
|EntrezGene=68441
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q80X95
|UniProt=Q80X95
|association_with_transcript=47bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end
|cluster_id=chr4:86221624..86221635,+
|description=CAGE_peak_3_at_Rraga_5end
|id=chr4:86221624..86221635,+
|ontology_enrichment_celltype=CL:0000055!8.45e-12!50;CL:0000393!2.36e-11!39;CL:0000211!2.36e-11!39;CL:0000221!3.59e-11!44;CL:0000133!3.59e-11!44;CL:0002319!7.98e-11!43;CL:0000540!5.91e-10!33;CL:0000047!5.91e-10!33;CL:0000031!5.91e-10!33;CL:0000404!5.91e-10!33;CL:0002321!1.47e-08!70;CL:0000220!1.47e-08!70;CL:0000723!3.76e-07!91;CL:0000048!3.76e-07!91
|ontology_enrichment_celltype_v019_2=CL:0000393,2.35e-11,39;CL:0000211,2.35e-11,39;CL:0000221,3.58e-11,44;CL:0000133,3.58e-11,44;CL:0002319,7.98e-11,43;CL:0000540,5.91e-10,33;CL:0000047,5.91e-10,33;CL:0000031,5.91e-10,33;CL:0000404,5.91e-10,33;CL:0002321,1.44e-08,70;CL:0000723,3.70e-07,91;CL:0000048,3.70e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.49e-19,73;UBERON:0001016,9.98e-19,75;UBERON:0002346,2.07e-13,64;UBERON:0003075,2.07e-13,64;UBERON:0007284,2.07e-13,64;UBERON:0004121,8.01e-13,95;UBERON:0000924,8.01e-13,95;UBERON:0006601,8.01e-13,95;UBERON:0000073,1.21e-12,54;UBERON:0001049,3.62e-12,52;UBERON:0005068,3.62e-12,52;UBERON:0006241,3.62e-12,52;UBERON:0007135,3.62e-12,52;UBERON:0010314,8.71e-11,92;UBERON:0000955,9.41e-11,47;UBERON:0006238,9.41e-11,47;UBERON:0002616,2.00e-10,46;UBERON:0010371,3.36e-10,73;UBERON:0000025,4.00e-10,114;UBERON:0004111,5.80e-09,122;UBERON:0003080,6.14e-09,40;UBERON:0003056,1.21e-08,49;UBERON:0002780,1.38e-08,39;UBERON:0001890,1.38e-08,39;UBERON:0006240,1.38e-08,39;UBERON:0002020,3.73e-08,34;UBERON:0003528,7.18e-07,29;UBERON:0002791,7.18e-07,29;UBERON:0001893,7.18e-07,29
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9365444,4.18079473792944,5.86839535649885,2.35580347785627,3.75883422546199,1.24267862617385,0,3.58839710505549,4.30192075188454,2.72231663681667,2.97067593998782,3.54807863530634,3.0512882047896,4.29674469985035,3.14578033277133,0.724752362478018,1.44015003128933,0.948033361884535,3.44632865993279,3.18403967210964,3.11809975146708,1.79026695667481,2.38417625737518,1.32214994471966,1.9199638532695,2.52416124870369,1.447929326445,1.91569751759997,1.07203668813728,2.50150788264857,1.40252282617883,1.13365191807606,1.77588762699252,2.6017018416748,1.34307693091263,4.056981474676,5.44279178808428,4.39563898241436,3.42989406526505,4.51414893631827,6.21227026878773,3.22227665555024,5.15605962095457,7.90524638780963,6.85082519770642,4.5323633843382,6.75022500231806,4.5032120322422,7.25027854374727,10.3552062350364,5.81209146471389,6.3843979744165,4.95127456686989,3.16038732188782,4.19226325255965,4.59608771125035,2.66696073361938,2.88449080134452,4.81378814387723,3.79045817645696,1.2673964994512,4.33840585187975,1.96647165686753,2.30490548657529,2.87177344778066,0.952587382566147,3.82418275618023,3.8581844092741,3.29668720642645,4.85756436443511,1.71434626192708,2.8396128985494,3.81497903915713,2.47088908274958,2.1645157495526,2.36920902096694,2.56099162021882,3.15683653725411,2.98769050460896,2.24456908663095,2.60997039873183,3.05363895364247,2.86461730218783,3.40861050609125,3.08650577569826,3.99696924700713,3.74290573512653,3.65280791882107,2.86932498103265,3.97064554415128,4.17362104116759
|phase1_expression=6.40595388419176,3.14077866875425,5.91499011206397,3.0246421130683,4.00716583957078,2.85394762250213,3.73780224952841,3.74457637980571,12.1078301050433,5.61754863172784,4.28044920563762,4.14815226775749,2.56801094896809,2.27293046289393,3.99731714178795,4.656931149966,7.69518065940961,10.567982539501,6.99283611389268,8.06340338416257,3.14660173558958,3.77305614563364,5.22399578277871,3.19984845586813,5.27641346454491,2.29692785646008,3.01533397311352,2.37018355954478,3.99049180858385,4.53654233567875,6.20845429834853,4.44521471421742,1.84519436275371,0,1.73310971850765,2.99222361645286,1.63335485009895,6.27797446105362,8.5946887897618,3.14114246384279,8.82347232046521,6.83045484958446,6.79714494243615,5.91715044485213,8.11015449756117,5.68994931701213,3.9119567217402,8.06693078607652,9.44650585758229,7.58276606389705,4.19959264876088,5.75010257459886,8.72469551500229,5.07753499407941,2.68875039313971,6.68874533693462,6.30373567865265,4.12537673821954,8.29497489524351,7.93486468908049,7.60597684207415,5.08266798103698,6.22506357277798,4.49949858640699,4.94433181283487,4.9733608046227,3.89480143673926,5.37905627450176,4.56234294157302,4.3201900266141,4.20649922702764,4.28476476605705,7.50953039235486,4.5321595709533,3.06705507258356,4.5960939330501,4.40463523997555,7.40586560894089,7.68032666281217,12.0016521834476,7.77644970620482,8.33461392890816,7.2587579740359,7.87867654044352,9.16789486660861,5.89257170947335,6.40672563595963,7.82877672466262,5.30083353332288,4.1564358058732,4.92769630792852,3.44169550792555,8.83962733820076,4.31762553310254,6.49776417447669,5.37632264516803,3.7919993435573,3.06774580640504,3.63700406444016,3.88673531961374,6.4787973097273,1.28326477414318,0,0,6.27824018932521,7.09407623330276,6.57181778519218,3.19714863213368,5.17875767294343,5.78924342352817,4.8575891494518,4.26251669636998,6.6878494204257,5.27529241934179,6.58496759959947,7.1629957057915,3.21353458054686,2.74738778147832,3.5384422077995,4.36770494858005,3.3126227769059,2.42437626567611,1.86391761218122,5.5628351432194,7.54008144528438,1.27728527604296,3.95389910869537,4.19931911695385,3.81210681219194,6.5907881338122,4.57500602818627,4.39790232395025,6.43149984711423,9.46147192122223,5.81806524766768,5.84068547043927,6.51771928642024,3.98102305952298,1.76905930903572,3.36706969418358,3.77349284591841,5.9774547152703,7.74267158163002,3.61691562805716,3.74200745332303,4.99643509110914,7.21503279109912,4.65666067330228,5.38919982332106,3.59301552318857,4.92663147659057,3.72632745126877,3.33656699070717,3.1342694986995,2.26360350048738,5.7719937377363,5.61770549850588,2.31613116403244,2.84163499395593,4.14251545071004,5.15957331958412,4.50155153652537,5.91861838963026,3.34499193970586,2.77680803197281,4.18561100550734,2.14618721119695,3.61972561338225,2.96207729844265,2.13417703302824,3.72916523910936,3.21639972335731,3.73235195994786,1.8788898626452,7.78072809687271,6.79170441703277,4.29544417878937,2.90895623329899,4.26576501070468,4.18026009348789,4.89696353023955,3.42861991859682,3.11329261382818,4.1849637744763,3.79623249235609,4.28217282282428,5.52937459360593,2.38747766449381,3.50935356814416,2.69645822596266,3.8904848977445,3.38540164532424,4.55202962287396,4.45569199177942,5.63538678365402,3.46207257337034,3.29719228184964,3.85747009396752,4.7427402843193,4.13308414342886,3.92496819603437,4.68909222902842,5.03969466048153,5.17219827719892,5.70021085828289,4.27238013531222,4.66578279193557,5.54707467430559,4.58326533206556,2.87696137450811,7.45822043165163,6.04035109013779,10.0637744569148,3.72140947668503,4.05648975048929,4.54641980304801,6.63770430031075,7.71909634181387,3.14080423283228,5.68474235311454,3.42226450528254,5.09235257325564,3.52035372432753,3.85264392116176,4.52282917683426,7.02481132288076,4.72905432318573,3.98636441367795,4.46473352240964,4.42430949732493,4.14443956478149,4.05017364028232,0,4.89515115436839,3.44234991113325,4.13905119457099,6.42202359951168,6.44664276257117,8.85248705034047,2.01976741763498,7.88770548540642,8.98009111882268,7.75524231838076,5.01834475700359,6.46116154838943,4.52922449262132,7.2865926301481,6.13737301613755,11.8586333383957,6.42642632843614,3.97432238583152,4.98583690268315,5.37526965866801,5.60898418106621,5.30980553359851,4.37005145078967,5.44182402536552,4.71512699389745,5.31543407185391,7.37844355065426,5.42699415653264,5.45300594216258,6.77345018930971,7.26884543252377,4.21674434299995,5.15677716240934,9.19186935535228,4.32146625675145,5.04498866752743,5.5727629108214,6.38424841112185,5.70780216326626,5.10101963866575,4.87143918583359,3.05073220482823,2.33015277950202,2.42581237860458,1.31909002353184,1.93757312035087,1.93001359770099,2.02932984805332,2.9545361954111,1.7488850197791,6.48988557036784,4.61351378154202,3.92135049130123,4.07427960213366,3.95573759709851,3.14396723758358,3.88922894451088,4.9293744698218,2.6590775941495,4.56059913554598,3.81868247206045,5.53587988766987,5.28630614529807,5.18425635944646,3.55450103224597,5.45906409365444,4.18079473792944,5.86839535649885,2.35580347785627,3.75883422546199,1.24267862617385,0,3.58839710505549,4.30192075188454,2.72231663681667,2.97067593998782,3.54807863530634,3.0512882047896,4.29674469985035,3.14578033277133,0.724752362478018,1.44015003128933,0.948033361884535,3.44632865993279,3.18403967210964,3.11809975146708,1.79026695667481,2.38417625737518,1.32214994471966,1.9199638532695,2.52416124870369,1.447929326445,1.91569751759997,1.07203668813728,2.50150788264857,1.40252282617883,1.13365191807606,1.77588762699252,2.6017018416748,1.34307693091263,4.056981474676,5.44279178808428,4.39563898241436,3.42989406526505,4.51414893631827,6.21227026878773,3.22227665555024,5.15605962095457,7.90524638780963,6.85082519770642,4.5323633843382,6.75022500231806,4.5032120322422,7.25027854374727,10.3552062350364,5.81209146471389,6.3843979744165,4.95127456686989,3.16038732188782,4.19226325255965,4.59608771125035,2.66696073361938,2.88449080134452,4.81378814387723,3.79045817645696,1.2673964994512,4.33840585187975,1.96647165686753,2.30490548657529,2.87177344778066,0.952587382566147,3.82418275618023,3.8581844092741,3.29668720642645,4.85756436443511,1.71434626192708,2.8396128985494,3.81497903915713,2.47088908274958,2.1645157495526,2.36920902096694,2.56099162021882,3.15683653725411,2.98769050460896,2.24456908663095,2.60997039873183,3.05363895364247,2.86461730218783,3.40861050609125,3.08650577569826,3.99696924700713,3.74290573512653,3.65280791882107,2.86932498103265,3.97064554415128,4.17362104116759
|short_description=p3@Rraga
}}
}}

Latest revision as of 06:19, 27 September 2015

Short description:p3@Rraga
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rraga_5end
Coexpression cluster:NA
Association with transcript: 47bp_to_ENSMUST00000091064, NM_178376, uc008tlw.2_5end
EntrezGene:Rraga
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rraga

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D95.30
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D54.74
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I85.81
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell2.35e-1139
electrically active cell2.35e-1139
ectodermal cell3.58e-1144
neurectodermal cell3.58e-1144
neural cell7.98e-1143
neuron5.91e-1033
neuronal stem cell5.91e-1033
neuroblast5.91e-1033
electrically signaling cell5.91e-1033
embryonic cell1.44e-0870
somatic stem cell3.70e-0791
multi fate stem cell3.70e-0791

Uber anatomy
Ontology termp-valuen
central nervous system8.49e-1973
nervous system9.98e-1975
neurectoderm2.07e-1364
neural plate2.07e-1364
presumptive neural plate2.07e-1364
ectoderm-derived structure8.01e-1395
ectoderm8.01e-1395
presumptive ectoderm8.01e-1395
regional part of nervous system1.21e-1254
neural tube3.62e-1252
neural rod3.62e-1252
future spinal cord3.62e-1252
neural keel3.62e-1252
structure with developmental contribution from neural crest8.71e-1192
brain9.41e-1147
future brain9.41e-1147
regional part of brain2.00e-1046
ecto-epithelium3.36e-1073
tube4.00e-10114
anatomical conduit5.80e-09122
anterior neural tube6.14e-0940
pre-chordal neural plate1.21e-0849
regional part of forebrain1.38e-0839
forebrain1.38e-0839
future forebrain1.38e-0839
gray matter3.73e-0834
brain grey matter7.18e-0729
regional part of telencephalon7.18e-0729
telencephalon7.18e-0729
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