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FFCP PHASE1:Mm9::chr11:29273590..29273613,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108686
|EntrezGene=108686
|HGNC=
|HGNC=
|MCL_coexpression_id=782
|TSSclassifier=NA
|UniProt=Q5SNZ0
|UniProt=Q5SNZ0
|association_with_transcript=-44bp_to_ENSMUST00000040182_5end
|association_with_transcript=-44bp_to_ENSMUST00000040182_5end
|cluster_id=chr11:29273590..29273613,+
|description=CAGE_peak_2_at_Ccdc88a_5end
|description=CAGE_peak_2_at_Ccdc88a_5end
|id=chr11:29273590..29273613,+
|id=chr11:29273590..29273613,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.01e-08!52;UBERON:0005068!1.01e-08!52;UBERON:0006241!1.01e-08!52;UBERON:0007135!1.01e-08!52;UBERON:0000033!1.45e-08!63;UBERON:0003056!1.73e-08!49;UBERON:0002346!4.58e-08!71;UBERON:0003075!4.58e-08!71;UBERON:0007284!4.58e-08!71;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0000955!1.60e-07!50;UBERON:0006238!1.60e-07!50;UBERON:0002020!3.21e-07!34;UBERON:0002616!4.57e-07!49;UBERON:0003080!6.07e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.39e-09,64;UBERON:0003075,1.39e-09,64;UBERON:0007284,1.39e-09,64;UBERON:0001049,3.50e-09,52;UBERON:0005068,3.50e-09,52;UBERON:0006241,3.50e-09,52;UBERON:0007135,3.50e-09,52;UBERON:0000073,4.82e-09,54;UBERON:0003056,9.93e-09,49;UBERON:0010371,1.50e-08,73;UBERON:0000955,1.01e-07,47;UBERON:0006238,1.01e-07,47;UBERON:0002021,1.15e-07,10;UBERON:0000411,1.15e-07,10;UBERON:0001950,1.15e-07,10;UBERON:0010314,1.19e-07,92;UBERON:0002020,2.52e-07,34;UBERON:0002616,3.01e-07,46;UBERON:0003080,3.79e-07,40;UBERON:0001017,6.71e-07,73
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.516493293766305,0,0.234064526321993,0,0.159544317990673,0,0.262261207256992,1.33243904726265,1.21485160433896,0.699561878128147,0.157731082679119,0.548457734422955,0.42438965179803,5.01755411891312,0.0992909512008853,0,0.639969691173627,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,2.3440060335714,1.57057123192139,0.588231488031014,1.36609096991689,2.42755176515577,1.51076181570693,1.4192770370732,1.10128051297009,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,1.28629718017973,1.14613375975503,1.54701627683233,3.84401275633236,3.1739458756322,3.1691570175309,1.69422266034566,0,0.449949858640699,2.96659908770092,0,0,1.53687322128622,1.97010263386108,1.75507719831198,2.10324961351382,3.42781181284564,3.3130281142742,2.81728838194394,1.34183659425531,0,1.10115880999389,3.31987079021488,3.37934373163736,1.45074916503213,1.18933936683133,2.08365348222704,1.67509799400829,1.68828783009504,3.36156145108982,7.36571463684169,6.54909731675874,2.23679334990361,0.757261933331841,1.28471652181535,0.579728977403356,0.860423876981386,0,0,0,0,1.68533304158102,2.55645483867087,1.29893002301434,1.7666978725517,1.40843419776681,2.56652954828636,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,1.8125651855302,1.33597925158342,1.38788261412909,0.304465478312141,0.922461989024234,1.3565037649736,4.35078216402108,1.38233250462643,0.988779870937496,1.87979163995885,3.5384422077995,4.36770494858005,2.87093973998512,3.87900202508178,0,3.80615036115011,2.51336048176146,0,2.75574786363617,0.599902730993408,2.1601938602421,5.54225365797844,6.40500843946077,8.67015029578764,7.64827008846016,7.67146371990992,4.57133698031032,4.54275536589721,3.56437773476107,2.36373244159177,1.76905930903572,1.89397670297827,1.43132487258974,2.75882525320168,2.34080768746954,2.41127708537144,5.98721192531685,4.09963904911519,4.2165776051878,3.3631438196072,1.5089759505299,4.53854592402766,3.69497360744293,2.84954452155847,2.50242524303038,4.179025998266,2.26360350048738,0.59710280045548,0,1.80143534980301,0.852490498186778,2.27838349789052,2.34526059981096,1.08037236876609,1.65721314909647,2.55793501271625,1.54267112887378,1.62773761325285,1.87791380979733,2.80236821681207,3.78487654801005,1.80584210487005,2.59420190546738,2.19299981137998,1.97595103761946,1.20785776884335,7.57043814830858,9.67303356365274,0,0.528901133327089,2.55945900642281,2.32236671860439,1.9330119198314,1.21010114774006,1.33426826306922,1.52180500890047,0,0.988193728344065,1.50801125280162,1.79060824837036,2.33956904542944,0,0.216138049874694,0.199141273254367,0.569003702859245,1.37098215131675,3.38123207019241,2.44381593414377,2.32742984601151,3.15611189506434,3.41477300470989,1.18088118383682,1.41298855057237,0.863780147452604,0,2.50267658574141,2.94838492669805,1.12431056192427,1.62288097110802,0.72353147925725,1.01850340712568,0.575392274901621,1.13494658742525,1.37280706594041,0,0.372140947668503,1.5601883655728,1.01031551178845,0.179397413521912,0.964887042726734,2.03228509183265,1.70542270593436,2.60743962307241,2.37643120085263,1.87752198630802,3.68513766371995,1.90434912708811,1.17080188714679,4.41378403497335,3.5434350343804,5.58091690301205,2.13022309130459,1.20879487306127,1.01254341007058,0,4.35124547054968,0,0.827810238914197,5.45872005958493,3.5163505977661,1.63934945376675,2.01976741763498,0.94652465824877,0.390438744296638,1.72338718186239,0.477937595905104,1.78238939265915,1.98153571552183,0.809621403349789,0.292255857911312,2.76701444562566,7.06906896127976,2.2710413633323,0.890328018336276,7.32991317091092,1.81467135269789,0,1.94224508923985,1.209294227859,0.377210159511796,1.77181135728464,1.53717573971964,1.80899805217755,2.90826983582004,0.712994756769443,1.58018378967908,0,0,2.7235168460303,1.8006109403131,0,2.14337035031592,3.72414490648775,3.56737635204141,2.79733335023606,1.522324745573,1.64270195644597,1.90648863777438,0.441056796109924,2.30840754118072,2.42196640043858,1.99032652262914,2.14870219205646,1.14898629821543,0.582961673259701,3.70850604021019,0.512612642393558,2.06386867963222,2.03713980106683,1.50694765603753,2.32380187125743,1.83022538565218,1.5298058699447,1.25956307091292,1.24379976423981,0,2.37251995185852,2.03319467126849,2.48412283890143,1.25452977608681,0.655087691238533,1.61837215661785,2.47960367176008,1.04702376793612,0.518459893167171,1.24267862617385,19.1655599152625,2.54178128274764,2.31641886639937,4.4723773319131,1.16243841129958,3.04121025883401,4.69428954583016,3.77592716047455,4.50895181030557,1.69108884578204,7.77681016896237,3.16011120628178,2.22997736819181,1.74608627180206,1.55904987573354,3.40150721768215,2.78153896693771,1.9231271923195,1.9199638532695,1.9183625490148,2.209997392995,1.41156659191577,0.974578807397524,0.865906574762965,1.40252282617883,1.13365191807606,1.33191572024439,0.62799699626633,1.00730769818447,2.12508553435409,1.12609485270709,1.28206136987086,0.85747351631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|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.516493293766305,0,0.234064526321993,0,0.159544317990673,0,0.262261207256992,1.33243904726265,1.21485160433896,0.699561878128147,0.157731082679119,0.548457734422955,0.42438965179803,5.01755411891312,0.0992909512008853,0,0.639969691173627,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,2.3440060335714,1.57057123192139,0.588231488031014,1.36609096991689,2.42755176515577,1.51076181570693,1.4192770370732,1.10128051297009,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,1.28629718017973,1.14613375975503,1.54701627683233,3.84401275633236,3.1739458756322,3.1691570175309,1.69422266034566,0,0.449949858640699,2.96659908770092,0,0,1.53687322128622,1.97010263386108,1.75507719831198,2.10324961351382,3.42781181284564,3.3130281142742,2.81728838194394,1.34183659425531,0,1.10115880999389,3.31987079021488,3.37934373163736,1.45074916503213,1.18933936683133,2.08365348222704,1.67509799400829,1.68828783009504,3.36156145108982,7.36571463684169,6.54909731675874,2.23679334990361,0.757261933331841,1.28471652181535,0.579728977403356,0.860423876981386,0,0,0,0,1.68533304158102,2.55645483867087,1.29893002301434,1.7666978725517,1.40843419776681,2.56652954828636,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,1.8125651855302,1.33597925158342,1.38788261412909,0.304465478312141,0.922461989024234,1.3565037649736,4.35078216402108,1.38233250462643,0.988779870937496,1.87979163995885,3.5384422077995,4.36770494858005,2.87093973998512,3.87900202508178,0,3.80615036115011,2.51336048176146,0,2.75574786363617,0.599902730993408,2.1601938602421,5.54225365797844,6.40500843946077,8.67015029578764,7.64827008846016,7.67146371990992,4.57133698031032,4.54275536589721,3.56437773476107,2.36373244159177,1.76905930903572,1.89397670297827,1.43132487258974,2.75882525320168,2.34080768746954,2.41127708537144,5.98721192531685,4.09963904911519,4.2165776051878,3.3631438196072,1.5089759505299,4.53854592402766,3.69497360744293,2.84954452155847,2.50242524303038,4.179025998266,2.26360350048738,0.59710280045548,0,1.80143534980301,0.852490498186778,2.27838349789052,2.34526059981096,1.08037236876609,1.65721314909647,2.55793501271625,1.54267112887378,1.62773761325285,1.87791380979733,2.80236821681207,3.78487654801005,1.80584210487005,2.59420190546738,2.19299981137998,1.97595103761946,1.20785776884335,7.57043814830858,9.67303356365274,0,0.528901133327089,2.55945900642281,2.32236671860439,1.9330119198314,1.21010114774006,1.33426826306922,1.52180500890047,0,0.988193728344065,1.50801125280162,1.79060824837036,2.33956904542944,0,0.216138049874694,0.199141273254367,0.569003702859245,1.37098215131675,3.38123207019241,2.44381593414377,2.32742984601151,3.15611189506434,3.41477300470989,1.18088118383682,1.41298855057237,0.863780147452604,0,2.50267658574141,2.94838492669805,1.12431056192427,1.62288097110802,0.72353147925725,1.01850340712568,0.575392274901621,1.13494658742525,1.37280706594041,0,0.372140947668503,1.5601883655728,1.01031551178845,0.179397413521912,0.964887042726734,2.03228509183265,1.70542270593436,2.60743962307241,2.37643120085263,1.87752198630802,3.68513766371995,1.90434912708811,1.17080188714679,4.41378403497335,3.5434350343804,5.58091690301205,2.13022309130459,1.20879487306127,1.01254341007058,0,4.35124547054968,0,0.827810238914197,5.45872005958493,3.5163505977661,1.63934945376675,2.01976741763498,0.94652465824877,0.390438744296638,1.72338718186239,0.477937595905104,1.78238939265915,1.98153571552183,0.809621403349789,0.292255857911312,2.76701444562566,7.06906896127976,2.2710413633323,0.890328018336276,7.32991317091092,1.81467135269789,0,1.94224508923985,1.209294227859,0.377210159511796,1.77181135728464,1.53717573971964,1.80899805217755,2.90826983582004,0.712994756769443,1.58018378967908,0,0,2.7235168460303,1.8006109403131,0,2.14337035031592,3.72414490648775,3.56737635204141,2.79733335023606,1.522324745573,1.64270195644597,1.90648863777438,0.441056796109924,2.30840754118072,2.42196640043858,1.99032652262914,2.14870219205646,1.14898629821543,0.582961673259701,3.70850604021019,0.512612642393558,2.06386867963222,2.03713980106683,1.50694765603753,2.32380187125743,1.83022538565218,1.5298058699447,1.25956307091292,1.24379976423981,0,2.37251995185852,2.03319467126849,2.48412283890143,1.25452977608681,0.655087691238533,1.61837215661785,2.47960367176008,1.04702376793612,0.518459893167171,1.24267862617385,19.1655599152625,2.54178128274764,2.31641886639937,4.4723773319131,1.16243841129958,3.04121025883401,4.69428954583016,3.77592716047455,4.50895181030557,1.69108884578204,7.77681016896237,3.16011120628178,2.22997736819181,1.74608627180206,1.55904987573354,3.40150721768215,2.78153896693771,1.9231271923195,1.9199638532695,1.9183625490148,2.209997392995,1.41156659191577,0.974578807397524,0.865906574762965,1.40252282617883,1.13365191807606,1.33191572024439,0.62799699626633,1.00730769818447,2.12508553435409,1.12609485270709,1.28206136987086,0.85747351631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|short_description=p2@Ccdc88a
|short_description=p2@Ccdc88a
}}
}}

Latest revision as of 06:14, 27 September 2015

Short description:p2@Ccdc88a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc88a_5end
Coexpression cluster:MCL_coexpression_mm9:782
Association with transcript: -44bp_to_ENSMUST00000040182_5end
EntrezGene:Ccdc88a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc88a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.39e-0964
neural plate1.39e-0964
presumptive neural plate1.39e-0964
neural tube3.50e-0952
neural rod3.50e-0952
future spinal cord3.50e-0952
neural keel3.50e-0952
regional part of nervous system4.82e-0954
pre-chordal neural plate9.93e-0949
ecto-epithelium1.50e-0873
brain1.01e-0747
future brain1.01e-0747
occipital lobe1.15e-0710
visual cortex1.15e-0710
neocortex1.15e-0710
structure with developmental contribution from neural crest1.19e-0792
gray matter2.52e-0734
regional part of brain3.01e-0746
anterior neural tube3.79e-0740
central nervous system6.71e-0773
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