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FFCP PHASE1:Mm9::chr4:84851321..84851399,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:84851321..84851399,+
|DHSsupport=NA
|short_description=p1@Sh3gl2
|DPIdataset=NA
|description=CAGE_peak_1_at_Sh3gl2_5end
|association_with_transcript=0bp_to_ENSMUST00000030212,ENSMUST00000107189,NM_019535,uc008tlo.1_5end
|EntrezGene=20404
|EntrezGene=20404
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q62420,Q8BXU5
|UniProt=Q62420,Q8BXU5
|association_with_transcript=0bp_to_ENSMUST00000030212,ENSMUST00000107189,NM_019535,uc008tlo.1_5end
|cluster_id=chr4:84851321..84851399,+
|description=CAGE_peak_1_at_Sh3gl2_5end
|id=chr4:84851321..84851399,+
|ontology_enrichment_celltype=CL:0000117!5.70e-12!23;CL:0000337!5.70e-12!23;CL:0000540!1.42e-08!33;CL:0000047!1.42e-08!33;CL:0000031!1.42e-08!33;CL:0000404!1.42e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.89e-12,23;CL:0000337,2.89e-12,23;CL:0000540,8.99e-09,33;CL:0000047,8.99e-09,33;CL:0000031,8.99e-09,33;CL:0000404,8.99e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.99e-21!52;UBERON:0005068!6.99e-21!52;UBERON:0006241!6.99e-21!52;UBERON:0007135!6.99e-21!52;UBERON:0002346!9.67e-21!71;UBERON:0003075!9.67e-21!71;UBERON:0007284!9.67e-21!71;UBERON:0000033!3.82e-20!63;UBERON:0000955!6.75e-20!50;UBERON:0006238!6.75e-20!50;UBERON:0002616!3.04e-19!49;UBERON:0001017!3.85e-19!73;UBERON:0005743!3.85e-19!73;UBERON:0000073!4.77e-18!75;UBERON:0001016!4.77e-18!75;UBERON:0003056!1.11e-17!49;UBERON:0004121!5.57e-17!102;UBERON:0000924!5.57e-17!102;UBERON:0006601!5.57e-17!102;UBERON:0003080!1.07e-16!40;UBERON:0002020!2.82e-16!34;UBERON:0002780!4.42e-16!39;UBERON:0001890!4.42e-16!39;UBERON:0006240!4.42e-16!39;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0000956!9.60e-10!21;UBERON:0001869!9.60e-10!21;UBERON:0000203!9.60e-10!21;UBERON:0002021!6.92e-08!10;UBERON:0000411!6.92e-08!10;UBERON:0001950!6.92e-08!10;UBERON:0002619!8.31e-08!17;UBERON:0007811!8.98e-08!86;UBERON:0000468!1.66e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.55e-22,54;UBERON:0002346,1.83e-21,64;UBERON:0003075,1.83e-21,64;UBERON:0007284,1.83e-21,64;UBERON:0001049,3.90e-21,52;UBERON:0005068,3.90e-21,52;UBERON:0006241,3.90e-21,52;UBERON:0007135,3.90e-21,52;UBERON:0001017,2.54e-19,73;UBERON:0000955,2.71e-18,47;UBERON:0006238,2.71e-18,47;UBERON:0010371,2.73e-18,73;UBERON:0003056,5.99e-18,49;UBERON:0001016,8.33e-18,75;UBERON:0002616,1.22e-17,46;UBERON:0003080,6.27e-17,40;UBERON:0002020,1.75e-16,34;UBERON:0002780,2.70e-16,39;UBERON:0001890,2.70e-16,39;UBERON:0006240,2.70e-16,39;UBERON:0004121,3.82e-16,95;UBERON:0000924,3.82e-16,95;UBERON:0006601,3.82e-16,95;UBERON:0003528,8.57e-14,29;UBERON:0002791,8.57e-14,29;UBERON:0001893,8.57e-14,29;UBERON:0010314,3.28e-10,92;UBERON:0000956,8.86e-10,21;UBERON:0001869,8.86e-10,21;UBERON:0000203,8.86e-10,21;UBERON:0002021,4.57e-08,10;UBERON:0000411,4.57e-08,10;UBERON:0001950,4.57e-08,10;UBERON:0002619,8.57e-08,17
|phase1_expression=8.96833543786846,21.9854506812797,22.7499619694768,32.061206398524,33.5600139064053,17.1236857350128,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,63.1871645822448,0,0,14.3993180514066,11.4704640533585,10.9104073181854,16.3689558540448,12.7128027284675,21.0925995596575,16.3819584343955,9.3126814475228,0,0,0,16.1756907060714,12.6338330472454,15.1085323634153,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0,0.419959264876088,0,0,0,0,0,0,0,48.5559506063035,59.2469896784677,44.3681982454325,1.0165335962074,0.889294796111139,0,0,0,1.79760066311043,1.15265491596466,51.3263580926964,42.5268705744826,46.6921414200068,113.974742777118,99.3908434282261,24.7431414414207,22.3319947472491,32.1726575313507,138.74601005923,190.126446408845,183.867020307723,39.8296588945185,47.6650623168554,35.9430225684164,211.062347245044,123.245011596938,146.686317865738,91.334861496837,88.4128137762429,63.7486104722528,0.302904773332736,0.831287161174641,4.63783181922684,0,0,0.539703191637817,0,0,11.0951091904084,0,0,0,11.8308472612412,0,0,0,3.89683873820185,2.02687892380079,2.52762222507392,13.0169622879728,0,25.8289321972795,4.16364784238726,5.1759131313064,5.99600292865752,7.83757730873637,8.93674174231356,16.2109902815281,0.494389935468748,0.722996784599558,0,0.485300549842228,0,0,13.0474232852686,471.962644782614,472.092877157528,17.1156226989756,0,0,0,251.198902281888,146.857693504779,48.3769255634528,302.801965774946,334.987249102733,217.761870698419,211.724848303424,5.29564692021645,14.8044295026011,64.6970261590207,50.2956035568673,3.6433724029557,7.35686734187113,8.28285797104606,9.0422890701429,21.159351236063,18.7046031615881,24.3624483855295,122.884101101032,1.07783996466421,2.26927296201383,3.69497360744293,2.6303487891309,3.89266148915837,3.48252166522167,1.64625709126355,6.96619933864726,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,1.18372367792605,0.393528463494808,0.771335564436891,0.465067889500816,0.268273401399619,0.350296027101508,1.15191894939436,0.820837320395476,0.324275238183423,0.438599962275997,0.219550115291051,0.268412837520744,288.307519481418,96.4216217993895,34.0331346473312,14.2803305998314,2.77274725695804,6.0381534683714,9.79392706047909,12.5043785266472,12.008414367623,10.8428606884159,9.96511029243474,11.0348299665087,14.3261069016154,13.3300836267571,13.062593836981,17.0775687644302,12.752144942607,18.3209971394018,6.82804443431094,10.3966146474853,10.1436962105772,10.5898690479563,12.9948166402309,22.0927832654503,24.1563571814663,18.4512684974503,17.1128613347099,20.4839292110189,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0,0,4.0645701836653,2.27389694124582,4.56301934037672,6.45031325945715,2.81628297946203,3.51763140627813,1.19021820443007,0.780534591431195,1.89162172927429,5.09368786192182,4.30527875375215,7.20998584749247,3.7990696010497,5.06271705035291,0,0,0.491764273019036,0.275936746304732,270.688294719417,245.910118470442,0,0.757412781613119,3.78609863299508,5.85658116444958,7.53981892064796,2.86762557543062,1.55959071857676,2.54768877709949,4.45291771842384,7.89090816360542,8.69633111482352,270.552548427162,8.51640511249612,3.91744328067962,5.21238269931443,14.6823409445557,0,6.5550771761845,5.13950046840077,4.71512699389745,2.95301892880773,5.53383266299069,6.46070732920553,6.90714086007261,6.41695281092498,5.37262488490887,3.16255825724996,3.09406629744561,87.4929786787235,8.46287141947158,8.27895576209629,13.2888961719587,20.2167866352192,21.0475204770443,24.517804069716,18.267896946876,1.40803024838226,0,23.8170669899359,10.7176064411962,5.00539722757307,3.37752379597673,2.98430860007841,3.61109979439135,13.4081184849731,271.462642143386,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.228778173206523,0,0,0,21.0027535963325,2.05618395827738,7.31950081656655,7.34436317588249,12.3362094648537,8.51613998610093,12.6772485601731,17.8531464366726,17.799404054914,20.2199358335197,1.86401793926078,19.1655599152625,11.6622905914303,11.0857188606255,14.1949367491155,11.2369046425626,12.8406655372991,20.8895884789442,41.9258119197519,56.0997492677553,28.5069262574687,19.0099804130191,0,2.8381530140623,4.00572732942826,1.29920822977795,2.14832034800978,0.79472541912506,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.403304740547362,0.194915761479505,0.384847366561318,0,6.57518112484113,1.10992976687032,0,0.503653849092235,168.074946808006,8.25802891985201,21.2455884150028,7.28852488868824,31.0974704501925,306.09549869845,296.449452310622,273.844055424032,264.482047626935,280.883833105963,288.560468802866,271.359045093186,276.046897576447,286.839144887002,253.18479244664,2.49089634202024,9.97562183502578,7.17081144167364,11.4260157022098,10.4806581313991,11.5821410323509,17.1129980407244,13.8043488350059,17.9714757371417,15.1618327058278,18.7574681918777,18.485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|phase1_expression=8.96833543786846,21.9854506812797,22.7499619694768,32.061206398524,33.5600139064053,17.1236857350128,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,63.1871645822448,0,0,14.3993180514066,11.4704640533585,10.9104073181854,16.3689558540448,12.7128027284675,21.0925995596575,16.3819584343955,9.3126814475228,0,0,0,16.1756907060714,12.6338330472454,15.1085323634153,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0,0.419959264876088,0,0,0,0,0,0,0,48.5559506063035,59.2469896784677,44.3681982454325,1.0165335962074,0.889294796111139,0,0,0,1.79760066311043,1.15265491596466,51.3263580926964,42.5268705744826,46.6921414200068,113.974742777118,99.3908434282261,24.7431414414207,22.3319947472491,32.1726575313507,138.74601005923,190.126446408845,183.867020307723,39.8296588945185,47.6650623168554,35.9430225684164,211.062347245044,123.245011596938,146.686317865738,91.334861496837,88.4128137762429,63.7486104722528,0.302904773332736,0.831287161174641,4.63783181922684,0,0,0.539703191637817,0,0,11.0951091904084,0,0,0,11.8308472612412,0,0,0,3.89683873820185,2.02687892380079,2.52762222507392,13.0169622879728,0,25.8289321972795,4.16364784238726,5.1759131313064,5.99600292865752,7.83757730873637,8.93674174231356,16.2109902815281,0.494389935468748,0.722996784599558,0,0.485300549842228,0,0,13.0474232852686,471.962644782614,472.092877157528,17.1156226989756,0,0,0,251.198902281888,146.857693504779,48.3769255634528,302.801965774946,334.987249102733,217.761870698419,211.724848303424,5.29564692021645,14.8044295026011,64.6970261590207,50.2956035568673,3.6433724029557,7.35686734187113,8.28285797104606,9.0422890701429,21.159351236063,18.7046031615881,24.3624483855295,122.884101101032,1.07783996466421,2.26927296201383,3.69497360744293,2.6303487891309,3.89266148915837,3.48252166522167,1.64625709126355,6.96619933864726,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,1.18372367792605,0.393528463494808,0.771335564436891,0.465067889500816,0.268273401399619,0.350296027101508,1.15191894939436,0.820837320395476,0.324275238183423,0.438599962275997,0.219550115291051,0.268412837520744,288.307519481418,96.4216217993895,34.0331346473312,14.2803305998314,2.77274725695804,6.0381534683714,9.79392706047909,12.5043785266472,12.008414367623,10.8428606884159,9.96511029243474,11.0348299665087,14.3261069016154,13.3300836267571,13.062593836981,17.0775687644302,12.752144942607,18.3209971394018,6.82804443431094,10.3966146474853,10.1436962105772,10.5898690479563,12.9948166402309,22.0927832654503,24.1563571814663,18.4512684974503,17.1128613347099,20.4839292110189,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0,0,4.0645701836653,2.27389694124582,4.56301934037672,6.45031325945715,2.81628297946203,3.51763140627813,1.19021820443007,0.780534591431195,1.89162172927429,5.09368786192182,4.30527875375215,7.20998584749247,3.7990696010497,5.06271705035291,0,0,0.491764273019036,0.275936746304732,270.688294719417,245.910118470442,0,0.757412781613119,3.78609863299508,5.85658116444958,7.53981892064796,2.86762557543062,1.55959071857676,2.54768877709949,4.45291771842384,7.89090816360542,8.69633111482352,270.552548427162,8.51640511249612,3.91744328067962,5.21238269931443,14.6823409445557,0,6.5550771761845,5.13950046840077,4.71512699389745,2.95301892880773,5.53383266299069,6.46070732920553,6.90714086007261,6.41695281092498,5.37262488490887,3.16255825724996,3.09406629744561,87.4929786787235,8.46287141947158,8.27895576209629,13.2888961719587,20.2167866352192,21.0475204770443,24.517804069716,18.267896946876,1.40803024838226,0,23.8170669899359,10.7176064411962,5.00539722757307,3.37752379597673,2.98430860007841,3.61109979439135,13.4081184849731,271.462642143386,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.228778173206523,0,0,0,21.0027535963325,2.05618395827738,7.31950081656655,7.34436317588249,12.3362094648537,8.51613998610093,12.6772485601731,17.8531464366726,17.799404054914,20.2199358335197,1.86401793926078,19.1655599152625,11.6622905914303,11.0857188606255,14.1949367491155,11.2369046425626,12.8406655372991,20.8895884789442,41.9258119197519,56.0997492677553,28.5069262574687,19.0099804130191,0,2.8381530140623,4.00572732942826,1.29920822977795,2.14832034800978,0.79472541912506,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.403304740547362,0.194915761479505,0.384847366561318,0,6.57518112484113,1.10992976687032,0,0.503653849092235,168.074946808006,8.25802891985201,21.2455884150028,7.28852488868824,31.0974704501925,306.09549869845,296.449452310622,273.844055424032,264.482047626935,280.883833105963,288.560468802866,271.359045093186,276.046897576447,286.839144887002,253.18479244664,2.49089634202024,9.97562183502578,7.17081144167364,11.4260157022098,10.4806581313991,11.5821410323509,17.1129980407244,13.8043488350059,17.9714757371417,15.1618327058278,18.7574681918777,18.485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|short_description=p1@Sh3gl2
}}
}}

Latest revision as of 06:13, 27 September 2015

Short description:p1@Sh3gl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh3gl2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000030212, ENSMUST00000107189, NM_019535, uc008tlo.1_5end
EntrezGene:Sh3gl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh3gl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.06
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A363.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B921.09
Ileum epithelium, pool2.CNhs13232.10253-104C116.38
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C348.56
Mouse Granule cells, donor2.CNhs12357.11731-123E359.25
Mouse Granule cells, donor3.CNhs12108.11636-122C744.37
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D551.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D946.69
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1113.97
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D599.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3138.75
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3190.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7183.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F447.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4211.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5123.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6146.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D691.33
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F688.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E163.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D725.83
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C18.94
adrenal gland, neonate N25.CNhs11223.1377-27I316.21
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B2471.96
cerebellum, neonate N30.CNhs11135.1395-42I2472.09
colon, adult.CNhs10468.36-18H717.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4251.20
corpus striatum, adult.CNhs10487.19-21D8146.86
corpus striatum, neonate N00.CNhs11226.630-43F148.38
cortex, adult.CNhs10473.12-14D5302.80
cortex, neonate N30.CNhs11107.1392-42F2334.99
diencephalon, adult.CNhs10482.20-12F2217.76
diencephalon, neonate N30.CNhs11201.1388-42B2211.72
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.80
epididymis, adult.CNhs10490.58-23B264.70
eyeball, adult.CNhs10484.31-12G450.30
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C621.16
eyeball, neonate N01.CNhs11140.1532-43E718.70
eyeball, neonate N02.CNhs11205.1551-44G824.36
eyeball, neonate N16.CNhs11188.777-19A2122.88
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8288.31
hippocampus, neonate N00.CNhs11228.627-43G196.42
intestinal mucosa, adult.CNhs10506.860-29I334.03
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F710.84
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F213.33
intestine, neonate N10.CNhs11098.755-23A513.06
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E312.75
intestine, neonate N30.CNhs11131.1384-42G118.32
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F810.40
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I210.59
kidney, embryo E18.CNhs11001.1288-20C712.99
kidney, neonate N00.CNhs11214.646-21G722.09
kidney, neonate N10.CNhs11206.758-6D524.16
kidney, neonate N20.CNhs11113.832-19I118.45
kidney, neonate N25.CNhs11122.1353-25F317.11
kidney, neonate N30.CNhs11203.1385-42H120.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A47.21
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C2270.69
medulla oblongata, neonate N30.CNhs11200.1396-42A3245.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I9270.55
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G887.49
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B920.22
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E918.27
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F823.82
skin, adult.CNhs10492.30-1C310.72
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I113.41
spinal cord, adult.CNhs10505.24-13C9271.46
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B812.68
stomach, neonate N07.CNhs11210.718-18A917.85
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I120.22
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F511.66
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G514.19
testis, embryo E17.CNhs11029.486-18I511.24
testis, embryo E18.CNhs11027.503-18G512.84
testis, neonate N00.CNhs11189.1300-22B720.89
testis, neonate N07.CNhs11222.726-26I441.93
testis, neonate N10.CNhs11204.763-44D956.10
testis, neonate N20.CNhs11110.839-18H328.51
testis, neonate N30.CNhs11130.1391-42E219.01
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E4168.07
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E521.25
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F831.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1306.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2296.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3273.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7264.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4280.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5288.56
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6271.36
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7276.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8286.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9253.18
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D211.43
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F211.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.80
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I527.98
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C215.04
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.89e-1223
neuroblast (sensu Vertebrata)2.89e-1223
neuron8.99e-0933
neuronal stem cell8.99e-0933
neuroblast8.99e-0933
electrically signaling cell8.99e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.55e-2254
neurectoderm1.83e-2164
neural plate1.83e-2164
presumptive neural plate1.83e-2164
neural tube3.90e-2152
neural rod3.90e-2152
future spinal cord3.90e-2152
neural keel3.90e-2152
central nervous system2.54e-1973
brain2.71e-1847
future brain2.71e-1847
ecto-epithelium2.73e-1873
pre-chordal neural plate5.99e-1849
nervous system8.33e-1875
regional part of brain1.22e-1746
anterior neural tube6.27e-1740
gray matter1.75e-1634
regional part of forebrain2.70e-1639
forebrain2.70e-1639
future forebrain2.70e-1639
ectoderm-derived structure3.82e-1695
ectoderm3.82e-1695
presumptive ectoderm3.82e-1695
brain grey matter8.57e-1429
regional part of telencephalon8.57e-1429
telencephalon8.57e-1429
structure with developmental contribution from neural crest3.28e-1092
cerebral cortex8.86e-1021
cerebral hemisphere8.86e-1021
pallium8.86e-1021
occipital lobe4.57e-0810
visual cortex4.57e-0810
neocortex4.57e-0810
regional part of cerebral cortex8.57e-0817
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