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FFCP PHASE2:Mm9::chr4:8462751..8462864,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:59021 |HGNC= |TSSclassifier=NA |UniProt=uniprot:P53994,uniprot:Q0PD65,uniprot:Q3TEG7 |association_with_transcript=0...")
 
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|DHSsupport=NA
|DHSsupport=NA
|DPIdataset=NA
|DPIdataset=NA
|EntrezGene=entrezgene:59021
|EntrezGene=59021
|HGNC=
|HGNC=
|TSSclassifier=NA
|TSSclassifier=NA
|UniProt=uniprot:P53994,uniprot:Q0PD65,uniprot:Q3TEG7
|UniProt=P53994,Q0PD65,Q3TEG7
|association_with_transcript=0bp_to_ENSMUST00000060232,NM_021518,uc008rxw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000060232,NM_021518,uc008rxw.1_5end
|cluster_id=chr4:8462751..8462864,+
|cluster_id=chr4:8462751..8462864,+

Latest revision as of 06:11, 27 September 2015

Short description:p1@Rab2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab2a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000060232, NM_021518, uc008rxw.1_5end
EntrezGene:Rab2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7141.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I587.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I694.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I361.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I459.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I790.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8103.49
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9109.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7135.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F293.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E695.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F170.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4105.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E899.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A348.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A554.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A271.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A474.18
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A685.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3130.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H279.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I991.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1109.27
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2114.25
GP2+ M cell, pool1.CNhs13228.11845-124H9105.08
GP2+ M cell, pool2.CNhs13231.11846-124I185.72
GP2+ M cell, pool3.CNhs13240.11847-124I294.16
Ileum epithelium, pool1.CNhs13199.10252-104B984.56
Ileum epithelium, pool2.CNhs13232.10253-104C198.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8104.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F584.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F698.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F784.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8346.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1332.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3330.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9356.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2357.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4378.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8111.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9111.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3111.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B773.54
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C271.51
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8102.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3119.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C494.35
Mouse Astrocytes, donor3.CNhs12107.11633-122C470.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2101.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9145.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1126.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1238.74
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1189.97
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5222.25
Mouse Granule cells, donor1.CNhs12131.11713-123C3165.90
Mouse Granule cells, donor2.CNhs12357.11731-123E3174.57
Mouse Granule cells, donor3.CNhs12108.11636-122C7157.19
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6110.46
Mouse Meningeal cells, donor3.CNhs12109.11639-122D196.93
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C783.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E774.16
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D290.94
Mouse Microglia, donor1.CNhs12629.11718-123C864.41
Mouse Microglia, donor2.CNhs12634.11736-123E853.41
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5150.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5149.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9133.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1184.24
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5169.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2169.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2158.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6147.08
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3211.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3230.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7210.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4186.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4213.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8195.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4235.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5202.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6226.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6207.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6190.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1200.38
Mouse Schwann, donor1.CNhs12507.11728-123D9259.67
Mouse Schwann, donor2.CNhs12573.11746-123F9212.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3224.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7142.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C4125.11
Mouse hepatocyte, donor3.CNhs12615.11637-122C8112.26
Mouse hepatocyte, donor6.CNhs13090.11822-124F4130.61
Mouse hepatocyte, donor8.CNhs13091.11824-124F6135.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7117.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7115.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3126.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8131.80
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6141.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1141.16
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8117.21
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1190.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2185.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3176.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6116.92
accessory axillary lymph node, adult.CNhs10475.1063-29H974.06
adrenal gland, adult.CNhs10508.49-24D7114.89
adrenal gland, embryo E14.CNhs11038.406-44C592.81
adrenal gland, embryo E16.CNhs11004.1254-43D695.30
adrenal gland, embryo E17.CNhs11043.1263-45I1138.14
adrenal gland, embryo E18.CNhs11026.1262-18F5144.69
adrenal gland, neonate N00.CNhs11191.1311-23C1137.34
adrenal gland, neonate N25.CNhs11223.1377-27I3154.70
amnion, adult pregnant day17.5.CNhs10488.583-22A8140.65
aorta, adult.CNhs10498.46-23H188.93
bone (os femoris), adult.CNhs10483.56-12G298.19
bone (os femoris), neonate N02.CNhs11227.1985-43F5141.22
bone (os femoris), neonate N16.CNhs11225.1525-43A6102.47
bone (os femoris), neonate N20.CNhs11195.1350-25C3114.92
cecum, adult.CNhs10467.37-13H4115.56
cerebellum, adult.CNhs10494.15-8B2142.58
cerebellum, neonate N30.CNhs11135.1395-42I2144.10
colon, adult.CNhs10468.36-18H779.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7142.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1142.18
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4135.71
corpora quadrigemina, adult.CNhs10501.16-22A4155.78
corpus striatum, adult.CNhs10487.19-21D8145.94
corpus striatum, neonate N00.CNhs11226.630-43F1176.42
cortex, adult.CNhs10473.12-14D5159.22
cortex, neonate N30.CNhs11107.1392-42F2180.02
diencephalon, adult.CNhs10482.20-12F2161.45
diencephalon, neonate N30.CNhs11201.1388-42B2164.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1126.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2112.96
epididymis, adult.CNhs10490.58-23B2116.00
eyeball, adult.CNhs10484.31-12G4129.63
eyeball, embryo E12.CNhs11016.345-16C677.55
eyeball, embryo E14.CNhs10521.399-16E2122.08
eyeball, embryo E15.CNhs10593.426-16C9117.04
eyeball, embryo E17.CNhs11023.1261-18D4119.51
eyeball, neonate N00.CNhs11207.633-15C6130.70
eyeball, neonate N01.CNhs11140.1532-43E7127.60
eyeball, neonate N02.CNhs11205.1551-44G8140.37
eyeball, neonate N16.CNhs11188.777-19A295.98
forelimb, embryo E11.CNhs10596.335-25E281.48
forelimb, embryo E12.CNhs10600.359-14H282.64
forelimb, embryo E13.CNhs10589.384-1E292.20
forelimb, embryo E14.CNhs10577.413-26A8102.36
forelimb, embryo E15.CNhs11007.437-20E797.32
forelimb, embryo E17.CNhs10598.1517-43C4118.06
forelimb, embryo E18.CNhs11008.1520-43B5121.41
gonad, embryo E13.CNhs11044.1564-45I686.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8118.67
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2139.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5132.70
heart, embryo E11.CNhs10586.331-24E9116.61
heart, embryo E12.CNhs11015.353-12F5112.57
heart, embryo E13.CNhs11013.376-3I9133.97
heart, embryo E14.CNhs10597.403-26D4107.72
heart, embryo E15.CNhs11017.431-16C8118.65
heart, embryo E16.CNhs11021.457-17C6138.53
heart, embryo E17.CNhs11025.479-18E5139.75
heart, embryo E18.CNhs11030.1283-20G3139.23
heart, neonate N00.CNhs11213.639-21E3153.31
heart, neonate N03.CNhs11221.1349-25I2148.93
heart, neonate N10.CNhs11118.749-24G1148.08
heart, neonate N16.CNhs11209.782-15G1157.92
heart, neonate N20.CNhs11127.821-26I6169.88
heart, neonate N25.CNhs11196.1351-25D3144.46
heart, neonate N30.CNhs11202.1390-42D2171.65
hippocampus, adult.CNhs10478.13-16E8187.58
hippocampus, neonate N00.CNhs11228.627-43G1156.42
intestinal mucosa, adult.CNhs10506.860-29I362.78
intestine, adult.CNhs10496.178-9A372.99
intestine, embryo E12.CNhs11019.1251-16I577.21
intestine, embryo E13.CNhs11010.381-16D583.84
intestine, embryo E15.CNhs10602.976-16D896.14
intestine, embryo E16.CNhs10585.463-22H499.63
intestine, embryo E17.CNhs10582.482-18D3104.30
intestine, embryo E18.CNhs10526.1289-20F7105.38
intestine, neonate N00.CNhs11126.644-26D181.14
intestine, neonate N01.CNhs11192.1322-23E9128.14
intestine, neonate N06.CNhs11102.688-20B8132.96
intestine, neonate N07.CNhs11095.720-20F2124.35
intestine, neonate N10.CNhs11098.755-23A5130.63
intestine, neonate N20.CNhs11187.827-18D179.10
intestine, neonate N25.CNhs11121.1352-25E386.89
intestine, neonate N30.CNhs11131.1384-42G192.40
kidney, embryo E14.CNhs10606.411-4I975.30
kidney, embryo E15.CNhs10997.434-16F882.94
kidney, embryo E16.CNhs10584.464-22A589.04
kidney, embryo E17.CNhs11028.483-18I286.35
kidney, embryo E18.CNhs11001.1288-20C792.13
kidney, neonate N00.CNhs11214.646-21G796.93
kidney, neonate N10.CNhs11206.758-6D5113.57
kidney, neonate N20.CNhs11113.832-19I1104.51
kidney, neonate N25.CNhs11122.1353-25F3125.60
kidney, neonate N30.CNhs11203.1385-42H1134.13
liver, adult pregnant day01.CNhs10466.508-5B296.35
liver, embryo E12.CNhs10601.355-15F848.72
liver, embryo E13.CNhs10524.378-3H646.98
liver, embryo E14.CNhs10594.409-16E142.95
liver, embryo E15.CNhs10520.433-16D757.00
liver, embryo E16.CNhs10523.462-17F553.78
liver, embryo E17.CNhs10510.481-18A372.57
liver, embryo E18.CNhs10579.499-43G479.40
liver, neonate N00.CNhs11117.641-24F495.66
liver, neonate N03.CNhs11123.1345-25G290.61
liver, neonate N06.CNhs11101.684-20A876.20
liver, neonate N07.CNhs11103.716-20H2110.90
liver, neonate N10.CNhs11115.751-24B993.30
liver, neonate N20.CNhs11220.823-25A3102.55
liver, neonate N25.CNhs11198.1368-26H1101.18
liver, neonate N30.CNhs11106.1382-42D1110.96
lung, adult.CNhs10474.28-22B1136.16
lung, embryo E12.CNhs10522.354-16G2109.15
lung, embryo E14.CNhs10604.404-26F886.21
lung, embryo E15.CNhs11020.432-17C591.49
lung, embryo E16.CNhs10998.458-17B684.72
lung, embryo E17.CNhs10605.480-44A6102.85
lung, embryo E18.CNhs10583.1287-20I697.12
lung, neonate N00.CNhs11224.640-42C6128.59
lung, neonate N06.CNhs11212.683-20E5105.77
lung, neonate N07.CNhs11111.715-19A3119.81
lung, neonate N10.CNhs11219.750-23E6123.58
lung, neonate N20.CNhs11109.822-18A4129.12
lung, neonate N25.CNhs11119.1359-25C7127.79
lung, neonate N30.CNhs11133.1394-42H2136.98
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1141.74
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1124.01
mammary gland, adult lactating day02.CNhs10480.595-22B6138.68
mammary gland, adult pregnant day19.CNhs10476.588-5H2119.76
medulla oblongata, adult.CNhs10477.17-12C2173.56
medulla oblongata, neonate N30.CNhs11200.1396-42A3197.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7122.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2187.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1129.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2126.11
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3140.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7113.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8126.10
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9141.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4122.66
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5142.62
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6156.53
olfactory brain, adult.CNhs10489.18-22I9122.74
ovary, adult.CNhs10507.91-2I792.69
ovary, embryo E18.CNhs11040.505-44H795.27
ovary, neonate N00.CNhs11217.1299-22I4124.61
oviduct, adult pregnant day01.CNhs10500.988-6G685.78
pancreas, adult.CNhs10486.34-16E4165.93
pancreas, embryo E14.CNhs11012.405-44F478.90
pancreas, embryo E15.CNhs11042.1556-45F299.46
pancreas, embryo E16.CNhs11003.460-26E5147.87
pancreas, embryo E17.CNhs10599.1558-45G3122.85
pancreas, embryo E18.CNhs10580.1535-43I7157.10
pancreas, neonate N00.CNhs11105.645-26G9159.45
pancreas, neonate N01.CNhs11138.1531-43D7138.51
pancreas, neonate N02.CNhs11139.1539-43D8137.61
pancreas, neonate N16.CNhs11136.787-43B6185.51
pancreas, neonate N25.CNhs11094.1555-45E2253.00
pancreas, neonate N30.CNhs11182.1548-44H5232.05
pituitary gland, adult.CNhs10493.21-1G8187.24
pituitary gland, embryo E12.CNhs11018.346-16E688.77
pituitary gland, embryo E13.CNhs11009.370-44C777.10
pituitary gland, embryo E14.CNhs11037.398-44A596.67
pituitary gland, embryo E15.CNhs10592.427-16B9105.16
pituitary gland, embryo E16.CNhs11036.449-43F6108.80
pituitary gland, embryo E17.CNhs11039.1265-44F5126.37
pituitary gland, neonate N00.CNhs11190.1308-22E9108.69
placenta, adult pregnant day10.CNhs10472.539-13I7131.89
placenta, adult pregnant day17.CNhs10464.577-18G3168.62
prostate, adult.CNhs10470.859-1F8168.48
skin, adult.CNhs10492.30-1C3111.79
skin, neonate N00.CNhs11124.650-25G4114.96
skin, neonate N03.CNhs11215.662-22H3104.10
skin, neonate N06.CNhs11097.693-20I5115.19
skin, neonate N10.CNhs11108.762-6C4125.90
small intestine, neonate N16.CNhs11114.790-21I196.77
spinal cord, adult.CNhs10505.24-13C9191.73
spleen, adult.CNhs10465.25-2G252.29
spleen, embryo E16.CNhs11035.461-43C196.59
spleen, embryo E18.CNhs11011.1271-21F276.11
spleen, neonate N10.CNhs11116.752-24D143.32
spleen, neonate N20.CNhs11112.824-19H135.81
spleen, neonate N25.CNhs11099.1354-25G341.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6139.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9128.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3120.10
stomach, adult.CNhs10503.33-1H6123.15
stomach, embryo E12.CNhs10588.356-43E387.63
stomach, embryo E15.CNhs10603.1252-16G891.29
stomach, embryo E16.CNhs11022.459-17D4108.76
stomach, embryo E17.CNhs11006.1035-18D5111.23
stomach, embryo E18.CNhs10999.1286-20C6106.56
stomach, neonate N03.CNhs11193.1340-24B8114.36
stomach, neonate N07.CNhs11210.718-18A9115.96
stomach, neonate N25.CNhs11104.1355-25E4144.23
stomach, neonate N30.CNhs11134.1386-42I190.47
submandibular gland, adult.CNhs10469.59-29C1184.54
testis, adult.CNhs10504.57-7G5170.24
testis, embryo E13.CNhs11031.389-23F583.88
testis, embryo E15.CNhs11034.443-27C586.53
testis, embryo E16.CNhs11033.470-26G577.78
testis, embryo E17.CNhs11029.486-18I597.64
testis, embryo E18.CNhs11027.503-18G592.08
testis, neonate N00.CNhs11189.1300-22B786.84
testis, neonate N07.CNhs11222.726-26I484.76
testis, neonate N10.CNhs11204.763-44D968.79
testis, neonate N20.CNhs11110.839-18H3125.14
testis, neonate N30.CNhs11130.1391-42E2126.73
thymus, adult.CNhs10471.38-12B573.95
thymus, embryo E14.CNhs11041.402-44I477.04
thymus, embryo E15.CNhs11005.430-45I273.75
thymus, embryo E16.CNhs11002.456-26C575.48
thymus, embryo E17.CNhs10581.478-18C174.65
thymus, embryo E18.CNhs10595.1273-19G479.67
thymus, neonate N02.CNhs11181.1541-43F866.35
thymus, neonate N03.CNhs11137.2104-43C770.00
thymus, neonate N06.CNhs11197.681-26C468.56
thymus, neonate N07.CNhs11211.713-19D369.27
thymus, neonate N10.CNhs11194.748-24E467.15
thymus, neonate N20.CNhs11186.820-7A272.12
thymus, neonate N25.CNhs11125.1362-25G781.11
thymus, neonate N30.CNhs11132.1393-42G287.07
tongue, adult.CNhs10499.32-1B4142.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H392.79
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F784.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5125.41
urinary bladder, adult.CNhs10481.879-12E4100.46
uterus, adult pregnant day19.CNhs10497.590-15F5137.01
uterus, adult.CNhs10509.92-27E597.44
vagina, adult.CNhs10502.89-27D5118.55
vesicular gland, adult.CNhs10491.51-27F8133.92
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1172.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2167.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3170.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7179.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4161.68
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5178.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6180.91
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7196.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8193.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9188.98
whole body, embryo E11.CNhs11014.324-5I8103.16
whole body, embryo E12.CNhs10587.857-27C967.44
whole body, embryo E13.CNhs10512.372-23H291.85
whole body, embryo E14.5.CNhs10578.420-27D289.95
whole body, embryo E14.CNhs10519.395-14B1116.13
whole body, embryo E16.CNhs10514.453-14F2142.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5111.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5107.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G597.88
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5122.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G597.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5106.76
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5114.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5113.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5124.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5120.03
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5119.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5108.99
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5115.80
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5119.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G596.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5103.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5116.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5107.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5117.17
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5123.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5112.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5103.12
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5110.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5111.67
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5120.89
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5122.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5122.36
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5126.12
whole body, embryo E17.5.CNhs10513.490-9F9103.98
whole body, embryo E17.CNhs10517.475-3I5112.16
whole body, embryo E18.CNhs10516.493-3B3115.80
whole body, neonate N00.CNhs10525.657-19C2116.67
whole body, neonate N01.CNhs10576.659-23C6133.90
whole body, neonate N06.CNhs10515.692-21D1137.21
whole body, neonate N10.CNhs10518.761-6B4143.53





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.22e-1239
electrically active cell1.22e-1239
neuron5.02e-1233
neuronal stem cell5.02e-1233
neuroblast5.02e-1233
electrically signaling cell5.02e-1233
CNS neuron (sensu Vertebrata)9.63e-1223
neuroblast (sensu Vertebrata)9.63e-1223
ectodermal cell7.26e-0844
neurectodermal cell7.26e-0844
neural cell1.19e-0743
embryonic cell7.60e-0770

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.06e-1792
ectoderm-derived structure7.93e-1595
ectoderm7.93e-1595
presumptive ectoderm7.93e-1595
nervous system1.06e-1475
gray matter2.13e-1434
regional part of nervous system1.09e-1354
central nervous system1.44e-1373
neural tube1.62e-1252
neural rod1.62e-1252
future spinal cord1.62e-1252
neural keel1.62e-1252
neurectoderm6.93e-1264
neural plate6.93e-1264
presumptive neural plate6.93e-1264
ecto-epithelium8.20e-1273
brain grey matter8.76e-1229
regional part of telencephalon8.76e-1229
telencephalon8.76e-1229
anterior neural tube7.84e-1040
regional part of brain1.17e-0946
brain1.25e-0947
future brain1.25e-0947
regional part of forebrain1.62e-0939
forebrain1.62e-0939
future forebrain1.62e-0939
pre-chordal neural plate7.47e-0949
anatomical conduit1.31e-08122
cerebral cortex1.03e-0721
cerebral hemisphere1.03e-0721
pallium1.03e-0721
tube2.13e-07114
regional part of cerebral cortex9.52e-0717
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