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FFCP PHASE1:Mm9::chr11:23977742..23977794,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14025
|EntrezGene=14025
|HGNC=
|HGNC=
|MCL_coexpression_id=706
|TSSclassifier=NA
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8
|association_with_transcript=-261bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end
|association_with_transcript=-261bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end
|cluster_id=chr11:23977742..23977794,+
|description=CAGE_peak_6_at_Bcl11a_5end
|description=CAGE_peak_6_at_Bcl11a_5end
|id=chr11:23977742..23977794,+
|id=chr11:23977742..23977794,+
|ontology_enrichment_celltype=CL:0000117!1.25e-10!23;CL:0000337!1.25e-10!23
|ontology_enrichment_celltype=CL:0000117!1.25e-10!23;CL:0000337!1.25e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-10,23;CL:0000337,4.03e-10,23;CL:0002609,1.38e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.50e-16!34;UBERON:0002791!4.99e-14!29;UBERON:0003528!4.99e-14!29;UBERON:0001893!4.99e-14!29;UBERON:0000956!9.47e-12!21;UBERON:0001869!9.47e-12!21;UBERON:0000203!9.47e-12!21;UBERON:0001049!6.50e-10!52;UBERON:0005068!6.50e-10!52;UBERON:0006241!6.50e-10!52;UBERON:0007135!6.50e-10!52;UBERON:0003080!9.34e-10!40;UBERON:0002780!1.46e-09!39;UBERON:0001890!1.46e-09!39;UBERON:0006240!1.46e-09!39;UBERON:0002619!4.77e-09!17;UBERON:0000955!1.00e-08!50;UBERON:0006238!1.00e-08!50;UBERON:0003056!1.67e-08!49;UBERON:0002616!3.49e-08!49;UBERON:0000033!5.01e-08!63;UBERON:0002021!2.73e-07!10;UBERON:0000411!2.73e-07!10;UBERON:0001950!2.73e-07!10;UBERON:0001017!8.02e-07!73;UBERON:0005743!8.02e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.69e-20,34;UBERON:0003528,2.00e-16,29;UBERON:0002791,2.00e-16,29;UBERON:0001893,2.00e-16,29;UBERON:0000956,7.60e-16,21;UBERON:0001869,7.60e-16,21;UBERON:0000203,7.60e-16,21;UBERON:0001049,4.37e-12,52;UBERON:0005068,4.37e-12,52;UBERON:0006241,4.37e-12,52;UBERON:0007135,4.37e-12,52;UBERON:0002619,4.62e-12,17;UBERON:0000073,7.09e-12,54;UBERON:0003080,7.63e-12,40;UBERON:0002780,1.42e-11,39;UBERON:0001890,1.42e-11,39;UBERON:0006240,1.42e-11,39;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002616,1.03e-09,46;UBERON:0002021,1.36e-09,10;UBERON:0000411,1.36e-09,10;UBERON:0001950,1.36e-09,10;UBERON:0001017,5.15e-09,73;UBERON:0001016,1.88e-08,75;UBERON:0010371,2.54e-08,73;UBERON:0003056,6.02e-08,49;UBERON:0002346,9.30e-08,64;UBERON:0003075,9.30e-08,64;UBERON:0007284,9.30e-08,64
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,5.36285681109004,7.67840828192137,7.21462408056651,0.595303031057488,1.09220046320974,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0.380046838912748,0,0,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,4.53013036355888,0,0,0,0,0,6.06949382578793,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0,21.8785081970888,22.1409738863973,21.2428210964896,2.57085885963423,1.98781686856452,17.1487118900936,18.7857123195743,17.4651569455904,1.10115880999389,0.766124028511126,0.768032666281217,3.16527090552465,2.65314166446988,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,3.98640706237488,10.0655700745662,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,10.616453229534,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,1.01656181658452,1.3481157546434,5.03250663100489,23.6230181972185,4.17178368461463,5.11430914660661,1.87009240103604,1.78465389374533,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.459804208866946,0,0.60281927134286,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,1.29340795759705,1.13463648100692,3.69497360744293,4.3839146485515,2.78047249225598,4.52727816478817,2.67516777330327,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.99101804543684,10.1875566255492,0,0,0.639864751605702,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.397912944082302,0.58489226135736,0,0.432276099749388,0.796565093017469,0,0,0,0,0.193952487167626,0,0,0,0,0,0,1.50160595144485,1.96558995113203,3.37293168577281,2.23146133527353,1.68824011826692,0,0.575392274901621,0.972811360650212,0.823684239564244,0,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,1.28440471990234,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,19.921921618152,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,1.15420377059036,3.22928853391811,2.5934557719107,1.90995750405018,1.47726809770555,0,0.556275906031529,4.44264290074417,0,1.48155621895769,1.13021074202815,3.55404992074665,2.74533807847827,2.03974115992626,1.6794174278839,1.65839968565309,0.954670618015114,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,1.01362607645082,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0.428736758158132,0,7.90652579663893,9.20650473014354,4.58316410751517,7.90524638780963,4.7955776383945,5.2877572817279,2.02506750069542,7.20513925158753,4.98456649882625,5.1776031175182,0.31136204275253,3.19219898720825,1.19513524027894,3.40349403895612,2.93458427679175,2.02227859295016,1.11123363900808,2.06035057238894,1.92551525755089,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.47257850531199,2.29741875822453,1.90517476513229,2.43357084484197,2.12200142510076,1.64834360321323,2.50238164228475,2.40008476669791,1.77475806159337,2.14592570952589,2.0348498328526,2.25862512996793,1.86152137361688,2.56099162021882,1.8414879800649,1.49384525230448,0,3.08451047122853,1.67457620038458,2.86461730218783,2.78886314134739,3.47231899766054,4.49659040288303,1.87145286756327,1.50409737833809,0.191288332068843,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,5.36285681109004,7.67840828192137,7.21462408056651,0.595303031057488,1.09220046320974,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0.380046838912748,0,0,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,4.53013036355888,0,0,0,0,0,6.06949382578793,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0,21.8785081970888,22.1409738863973,21.2428210964896,2.57085885963423,1.98781686856452,17.1487118900936,18.7857123195743,17.4651569455904,1.10115880999389,0.766124028511126,0.768032666281217,3.16527090552465,2.65314166446988,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,3.98640706237488,10.0655700745662,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,10.616453229534,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,1.01656181658452,1.3481157546434,5.03250663100489,23.6230181972185,4.17178368461463,5.11430914660661,1.87009240103604,1.78465389374533,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.459804208866946,0,0.60281927134286,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,1.29340795759705,1.13463648100692,3.69497360744293,4.3839146485515,2.78047249225598,4.52727816478817,2.67516777330327,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.99101804543684,10.1875566255492,0,0,0.639864751605702,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.397912944082302,0.58489226135736,0,0.432276099749388,0.796565093017469,0,0,0,0,0.193952487167626,0,0,0,0,0,0,1.50160595144485,1.96558995113203,3.37293168577281,2.23146133527353,1.68824011826692,0,0.575392274901621,0.972811360650212,0.823684239564244,0,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,1.28440471990234,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,19.921921618152,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,1.15420377059036,3.22928853391811,2.5934557719107,1.90995750405018,1.47726809770555,0,0.556275906031529,4.44264290074417,0,1.48155621895769,1.13021074202815,3.55404992074665,2.74533807847827,2.03974115992626,1.6794174278839,1.65839968565309,0.954670618015114,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,1.01362607645082,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0.428736758158132,0,7.90652579663893,9.20650473014354,4.58316410751517,7.90524638780963,4.7955776383945,5.2877572817279,2.02506750069542,7.20513925158753,4.98456649882625,5.1776031175182,0.31136204275253,3.19219898720825,1.19513524027894,3.40349403895612,2.93458427679175,2.02227859295016,1.11123363900808,2.06035057238894,1.92551525755089,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.47257850531199,2.29741875822453,1.90517476513229,2.43357084484197,2.12200142510076,1.64834360321323,2.50238164228475,2.40008476669791,1.77475806159337,2.14592570952589,2.0348498328526,2.25862512996793,1.86152137361688,2.56099162021882,1.8414879800649,1.49384525230448,0,3.08451047122853,1.67457620038458,2.86461730218783,2.78886314134739,3.47231899766054,4.49659040288303,1.87145286756327,1.50409737833809,0.191288332068843,0.661774257358546,0.231867835620421
|short_description=p6@Bcl11a
|short_description=p6@Bcl11a
}}
}}

Latest revision as of 05:56, 27 September 2015

Short description:p6@Bcl11a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Bcl11a_5end
Coexpression cluster:MCL_coexpression_mm9:706
Association with transcript: -261bp_to_ENSMUST00000000881, NM_001159289, NM_001242934, NM_016707, uc007ifs.2, uc007ift.2, uc007ifu.2, uc007ifv.2_5end
EntrezGene:Bcl11a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Bcl11a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F123.62
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G110.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.03e-1023
neuroblast (sensu Vertebrata)4.03e-1023
neuron of cerebral cortex1.38e-076

Uber anatomy
Ontology termp-valuen
gray matter6.69e-2034
brain grey matter2.00e-1629
regional part of telencephalon2.00e-1629
telencephalon2.00e-1629
cerebral cortex7.60e-1621
cerebral hemisphere7.60e-1621
pallium7.60e-1621
neural tube4.37e-1252
neural rod4.37e-1252
future spinal cord4.37e-1252
neural keel4.37e-1252
regional part of cerebral cortex4.62e-1217
regional part of nervous system7.09e-1254
anterior neural tube7.63e-1240
regional part of forebrain1.42e-1139
forebrain1.42e-1139
future forebrain1.42e-1139
brain1.91e-1047
future brain1.91e-1047
regional part of brain1.03e-0946
occipital lobe1.36e-0910
visual cortex1.36e-0910
neocortex1.36e-0910
central nervous system5.15e-0973
nervous system1.88e-0875
ecto-epithelium2.54e-0873
pre-chordal neural plate6.02e-0849
neurectoderm9.30e-0864
neural plate9.30e-0864
presumptive neural plate9.30e-0864
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