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FFCP PHASE1:Mm9::chr18:37925612..37925662,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:37925612..37925662,+
|DHSsupport=NA
|short_description=p9@Pcdhga11,p9@Pcdhga12,p9@Pcdhga3,p9@Pcdhga8,p9@Pcdhga9,p9@Pcdhgb6,p9@Pcdhgc3,p9@Pcdhgc4,p9@Pcdhgc5
|DPIdataset=NA
|description=CAGE_peak_9_at_Pcdhga11_5end,CAGE_peak_9_at_Pcdhga12_5end,CAGE_peak_9_at_Pcdhga3_5end,CAGE_peak_9_at_Pcdhga8_5end,CAGE_peak_9_at_Pcdhga9_5end,CAGE_peak_9_at_Pcdhgb6_5end,CAGE_peak_9_at_Pcdhgc3_5end,CAGE_peak_9_at_Pcdhgc4_5end,CAGE_peak_9_at_Pcdhgc5_5end
|association_with_transcript=378bp_to_ENSMUST00000044851,NM_033595,uc008erd.1_5end
|EntrezGene=93703,93706,93707,93708,93711,93716,93717,93723,93724
|EntrezGene=93703,93706,93707,93708,93711,93716,93717,93723,93724
|HGNC=
|HGNC=
|MCL_coexpression_id=1715
|TSSclassifier=NA
|UniProt=Q91XY7
|UniProt=Q91XY7
|association_with_transcript=378bp_to_ENSMUST00000044851,NM_033595,uc008erd.1_5end
|cluster_id=chr18:37925612..37925662,+
|description=CAGE_peak_9_at_Pcdhga11_5end,CAGE_peak_9_at_Pcdhga12_5end,CAGE_peak_9_at_Pcdhga3_5end,CAGE_peak_9_at_Pcdhga8_5end,CAGE_peak_9_at_Pcdhga9_5end,CAGE_peak_9_at_Pcdhgb6_5end,CAGE_peak_9_at_Pcdhgc3_5end,CAGE_peak_9_at_Pcdhgc4_5end,CAGE_peak_9_at_Pcdhgc5_5end
|id=chr18:37925612..37925662,+
|ontology_enrichment_celltype=CL:0000117!2.77e-10!23;CL:0000337!2.77e-10!23;CL:0000221!6.09e-08!44;CL:0000133!6.09e-08!44;CL:0002319!8.37e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-11,23;CL:0000337,1.08e-11,23;CL:0000221,1.15e-09,44;CL:0000133,1.15e-09,44;CL:0002319,1.71e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.39e-24!63;UBERON:0000955!1.25e-22!50;UBERON:0006238!1.25e-22!50;UBERON:0001049!1.50e-22!52;UBERON:0005068!1.50e-22!52;UBERON:0006241!1.50e-22!52;UBERON:0007135!1.50e-22!52;UBERON:0000073!3.20e-22!75;UBERON:0001016!3.20e-22!75;UBERON:0002616!6.68e-22!49;UBERON:0002346!1.59e-21!71;UBERON:0003075!1.59e-21!71;UBERON:0007284!1.59e-21!71;UBERON:0001017!2.00e-21!73;UBERON:0005743!2.00e-21!73;UBERON:0004121!6.76e-21!102;UBERON:0000924!6.76e-21!102;UBERON:0006601!6.76e-21!102;UBERON:0003056!7.33e-20!49;UBERON:0003080!2.43e-17!40;UBERON:0002780!6.73e-17!39;UBERON:0001890!6.73e-17!39;UBERON:0006240!6.73e-17!39;UBERON:0002020!1.91e-16!34;UBERON:0002791!7.42e-15!29;UBERON:0003528!7.42e-15!29;UBERON:0001893!7.42e-15!29;UBERON:0000153!2.24e-13!94;UBERON:0007811!3.27e-12!86;UBERON:0000956!3.88e-12!21;UBERON:0001869!3.88e-12!21;UBERON:0000203!3.88e-12!21;UBERON:0000025!1.92e-11!114;UBERON:0004111!1.41e-10!122;UBERON:0002619!6.59e-10!17;UBERON:0000468!4.53e-08!333;UBERON:0002021!1.17e-07!10;UBERON:0000411!1.17e-07!10;UBERON:0001950!1.17e-07!10;UBERON:0000475!2.42e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-27,54;UBERON:0002346,7.77e-27,64;UBERON:0003075,7.77e-27,64;UBERON:0007284,7.77e-27,64;UBERON:0001016,1.08e-26,75;UBERON:0001049,5.63e-26,52;UBERON:0005068,5.63e-26,52;UBERON:0006241,5.63e-26,52;UBERON:0007135,5.63e-26,52;UBERON:0001017,1.04e-25,73;UBERON:0004121,2.53e-24,95;UBERON:0000924,2.53e-24,95;UBERON:0006601,2.53e-24,95;UBERON:0000955,3.50e-24,47;UBERON:0006238,3.50e-24,47;UBERON:0002616,2.64e-23,46;UBERON:0003056,1.06e-22,49;UBERON:0010371,1.57e-22,73;UBERON:0010314,8.81e-20,92;UBERON:0003080,1.53e-19,40;UBERON:0002780,5.37e-19,39;UBERON:0001890,5.37e-19,39;UBERON:0006240,5.37e-19,39;UBERON:0002020,1.57e-18,34;UBERON:0003528,1.57e-16,29;UBERON:0002791,1.57e-16,29;UBERON:0001893,1.57e-16,29;UBERON:0000956,6.87e-14,21;UBERON:0001869,6.87e-14,21;UBERON:0000203,6.87e-14,21;UBERON:0000025,3.31e-12,114;UBERON:0002619,3.92e-11,17;UBERON:0004111,5.20e-11,122;UBERON:0002021,3.80e-09,10;UBERON:0000411,3.80e-09,10;UBERON:0001950,3.80e-09,10;UBERON:0003076,5.76e-07,12;UBERON:0003057,5.76e-07,12
|phase1_expression=2.24208385946712,0,0,0,0,0,0.934450562382103,0,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,1.09012578190223,1.97717564461025,1.36100929351998,1.25987779462826,1.43752564364972,0,0,0,1.80081605225163,0.85960031981627,1.03134418455488,3.03474691289397,4.23192783417626,3.1691570175309,4.40497891689872,0.889294796111139,0,0,0,1.79760066311043,1.92109152660777,2.7996195323289,3.78016627328734,2.73422449756797,1.14260393761521,3.75476519617743,2.44981598429908,2.77951865952885,0.919218786610021,2.20231761998777,2.93680877595932,2.30409799884365,2.63772575460388,2.65314166446988,5.2091337055676,1.67509799400829,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,3.35519002485541,1.59025005999687,2.49386148352392,1.73918693221007,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0,0.742210695324124,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,0.587943535678524,1.13099932196708,0,1.15679485535929,0,1.13236794963186,0.662524555381181,0.484875253135222,0,7.31951992528868,3.77004072264219,0.255457055208591,0.11981512450592,0,0.127070227073065,2.24685959107234,0.915001205637253,7.03664371832041,4.86708096538374,4.85859368927628,3.32460871295296,4.38051410282946,0.611036183101898,0.622034853050465,0,1.05220927943237,2.08192708740326,2.5289231487682,1.62055916824814,1.50704817835715,2.04109497453984,1.92170580427275,1.96773621575431,1.29351685369508,1.94011193639558,1.89106080167819,2.11141348996739,1.97276159184817,2.50242524303038,0.696504333044333,0.823128545631774,1.39323986772945,0,0,0,1.24275463521301,1.17263029990548,1.2604344302271,0.473489471170421,0.983821158737019,0.771335564436891,1.16266972375204,0.804820204198858,0.583826711835847,1.15191894939436,1.14917224855367,0.405344047729279,0.730999937126662,1.09775057645525,0.536825675041487,4.41608891984667,7.10041825417063,0,0,2.55945900642281,0.464473343720877,1.03093969057675,1.21010114774006,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,1.32767530667157,1.14248512609729,1.1270773567308,0.610953983535943,1.74557238450863,1.47285221769669,0.885311519739602,0.442830443938806,0.470996183524124,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0.739012760666419,1.32643988239339,1.79261474086228,2.03694102930226,1.64283173801951,1.67506257441816,1.19021820443007,1.17080188714679,3.31033802623001,2.6575762757853,3.18909537314974,2.13022309130459,1.55416483679306,0.723245292907558,0,0,0,0,3.05046120976805,2.81308047821288,0,0.757412781613119,0,0,0,0.238968797952552,0.445597348164788,0,0.809621403349789,0.292255857911312,0,6.10510501201433,0.141940085208269,0.890328018336276,1.46598263418218,0.659880491890142,1.32745138339963,0.485561272309963,0.302323556964751,1.32023555829129,1.18120757152309,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,1.68166288917581,1.07168517515796,1.59606210278046,1.78368817602071,2.63278432963394,2.43571959291679,0,0.63549621259146,0.220528398054962,0.65954501176592,0.484393280087717,0.965006798850494,0.835606408021955,0.328281799490123,0.291480836629851,1.8542530201051,0.170870880797853,0.619160603889667,0.370389054739423,0,0.27338845544205,0,0,0,0.138199973804424,0,2.21435195506795,1.21991680276109,1.18805874903981,1.04544148007234,0.655087691238533,0.809186078308924,0.826534557253359,0.523511883968059,0,0,0,1.04661582230785,0.496375471371293,1.16670713006429,1.6790777052105,0.675824501963113,1.05621514781179,0.39061315453185,0,0,0,0,1.41907650703115,0.513554785824136,0.389762468933385,0,0,0.120195449519969,0.443068581523732,0.504832249740738,0.304827226619999,0.504130925684203,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0,0,0.335769232728157,0.579568782096571,0.563047426353546,0.36630324853453,0.643105137237198,0,6.21227026878773,7.36520378411483,5.72895513439397,7.38968684077857,6.16574267793578,3.0215755895588,5.40018000185445,2.70192721934532,3.17199686288943,4.14208249401456,0.415149390336707,1.99512436700516,2.04880326904961,0.486213434136588,1.04806581313991,1.47074806760011,0.666740183404846,1.23621034343337,0,1.26348605881899,0.50695859978048,2.82939512079114,2.06011316433741,1.72867911493147,1.32101578597911,0.476293691283074,1.50649623728312,1.35036454324594,1.64834360321323,1.32479028120958,1.37147700954166,0.532427418478012,0.953744759789284,0.872078499793971,2.07040636913727,1.77690676572521,1.28049581010941,0.526139422875686,2.44447404922551,0,0.949080144993393,2.26560309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|short_description=p9@Pcdhga11,p9@Pcdhga12,p9@Pcdhga3,p9@Pcdhga8,p9@Pcdhga9,p9@Pcdhgb6,p9@Pcdhgc3,p9@Pcdhgc4,p9@Pcdhgc5
}}
}}

Latest revision as of 05:56, 27 September 2015

Short description:p9@Pcdhga11, p9@Pcdhga12, p9@Pcdhga3, p9@Pcdhga8, p9@Pcdhga9, p9@Pcdhgb6, p9@Pcdhgc3, p9@Pcdhgc4, p9@Pcdhgc5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Pcdhga11_5end, CAGE_peak_9_at_Pcdhga12_5end, CAGE_peak_9_at_Pcdhga3_5end, CAGE_peak_9_at_Pcdhga8_5end, CAGE_peak_9_at_Pcdhga9_5end, CAGE_peak_9_at_Pcdhgb6_5end, CAGE_peak_9_at_Pcdhgc3_5end, CAGE_peak_9_at_Pcdhgc4_5end, CAGE_peak_9_at_Pcdhgc5_5end
Coexpression cluster:MCL_coexpression_mm9:1715
Association with transcript: 378bp_to_ENSMUST00000044851, NM_033595, uc008erd.1_5end
EntrezGene:93703,93706,93707,93708,93711,93716,93717,93723,93724
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p9@Pcdhga11p9@Pcdhga12p9@Pcdhga3p9@Pcdhga8p9@Pcdhga9p9@Pcdhgb6p9@Pcdhgc3p9@Pcdhgc4p9@Pcdhgc5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.08e-1123
neuroblast (sensu Vertebrata)1.08e-1123
ectodermal cell1.15e-0944
neurectodermal cell1.15e-0944
neural cell1.71e-0943

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.02e-2754
neurectoderm7.77e-2764
neural plate7.77e-2764
presumptive neural plate7.77e-2764
nervous system1.08e-2675
neural tube5.63e-2652
neural rod5.63e-2652
future spinal cord5.63e-2652
neural keel5.63e-2652
central nervous system1.04e-2573
ectoderm-derived structure2.53e-2495
ectoderm2.53e-2495
presumptive ectoderm2.53e-2495
brain3.50e-2447
future brain3.50e-2447
regional part of brain2.64e-2346
pre-chordal neural plate1.06e-2249
ecto-epithelium1.57e-2273
structure with developmental contribution from neural crest8.81e-2092
anterior neural tube1.53e-1940
regional part of forebrain5.37e-1939
forebrain5.37e-1939
future forebrain5.37e-1939
gray matter1.57e-1834
brain grey matter1.57e-1629
regional part of telencephalon1.57e-1629
telencephalon1.57e-1629
cerebral cortex6.87e-1421
cerebral hemisphere6.87e-1421
pallium6.87e-1421
tube3.31e-12114
regional part of cerebral cortex3.92e-1117
anatomical conduit5.20e-11122
occipital lobe3.80e-0910
visual cortex3.80e-0910
neocortex3.80e-0910
posterior neural tube5.76e-0712
chordal neural plate5.76e-0712
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