FFCP PHASE1:Mm9::chr18:37839908..37839961,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:37839908..37839961,+ to FFCP PHASE1:Mm9::chr18:37839908..37839961,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=93699 | |EntrezGene=93699 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1715 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XX8 | |UniProt=Q91XX8 | ||
|association_with_transcript=-150bp_to_NM_033574,uc008eqo.1_5end | |||
|cluster_id=chr18:37839908..37839961,+ | |||
|description=CAGE_peak_1_at_Pcdhgb1_5end | |||
|id=chr18:37839908..37839961,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.14e-07!23;CL:0000337!2.14e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-07,23;CL:0000337,1.46e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.85e-26!102;UBERON:0000924!3.85e-26!102;UBERON:0006601!3.85e-26!102;UBERON:0000033!1.07e-25!63;UBERON:0002346!4.75e-25!71;UBERON:0003075!4.75e-25!71;UBERON:0007284!4.75e-25!71;UBERON:0001049!7.27e-25!52;UBERON:0005068!7.27e-25!52;UBERON:0006241!7.27e-25!52;UBERON:0007135!7.27e-25!52;UBERON:0001017!7.20e-23!73;UBERON:0005743!7.20e-23!73;UBERON:0000955!1.34e-22!50;UBERON:0006238!1.34e-22!50;UBERON:0000073!1.49e-22!75;UBERON:0001016!1.49e-22!75;UBERON:0002616!7.71e-22!49;UBERON:0003056!4.57e-21!49;UBERON:0003080!7.36e-19!40;UBERON:0002780!3.43e-18!39;UBERON:0001890!3.43e-18!39;UBERON:0006240!3.43e-18!39;UBERON:0002020!4.49e-15!34;UBERON:0004111!9.42e-15!122;UBERON:0000025!6.74e-14!114;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0000153!1.23e-12!94;UBERON:0000468!6.08e-11!333;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0007811!1.97e-10!86;UBERON:0002619!2.64e-09!17;UBERON:0000922!6.03e-09!328;UBERON:0000475!1.33e-07!200;UBERON:0002021!8.03e-07!10;UBERON:0000411!8.03e-07!10;UBERON:0001950!8.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.83e-26,73;UBERON:0010314,3.38e-26,92;UBERON:0004121,5.23e-26,95;UBERON:0000924,5.23e-26,95;UBERON:0006601,5.23e-26,95;UBERON:0002346,1.03e-25,64;UBERON:0003075,1.03e-25,64;UBERON:0007284,1.03e-25,64;UBERON:0001049,1.60e-25,52;UBERON:0005068,1.60e-25,52;UBERON:0006241,1.60e-25,52;UBERON:0007135,1.60e-25,52;UBERON:0000073,1.88e-24,54;UBERON:0000955,1.12e-23,47;UBERON:0006238,1.12e-23,47;UBERON:0001017,5.95e-23,73;UBERON:0002616,6.89e-23,46;UBERON:0001016,1.23e-22,75;UBERON:0003056,1.29e-21,49;UBERON:0003080,2.40e-19,40;UBERON:0002780,1.17e-18,39;UBERON:0001890,1.17e-18,39;UBERON:0006240,1.17e-18,39;UBERON:0002020,1.87e-15,34;UBERON:0004111,5.06e-14,122;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0000025,2.49e-13,114;UBERON:0000956,6.61e-11,21;UBERON:0001869,6.61e-11,21;UBERON:0000203,6.61e-11,21;UBERON:0002619,1.60e-09,17;UBERON:0000922,4.76e-07,320;UBERON:0002021,5.70e-07,10;UBERON:0000411,5.70e-07,10;UBERON:0001950,5.70e-07,10;UBERON:0003076,9.89e-07,12;UBERON:0003057,9.89e-07,12 | |||
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|phase1_expression=4.96461426024861,0,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,3.06155844543851,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,7.04152209913235,7.41285531693518,3.29529274101708,7.38833616482277,3.21968769738334,1.43752564364972,0,0,0,4.3734104126111,2.0057340795713,2.57836046138721,7.08107613008592,8.46385566835253,7.60597684207415,2.37191172448392,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,3.59520132622086,3.84218305321555,4.56234294157302,4.18518408828241,5.46844899513593,3.71346279724945,5.96345060569357,5.38959516545798,8.05101956553185,3.67687514644008,2.20231761998777,3.70293280447044,3.5329502648936,5.27545150920775,5.58074625974699,7.29278718779464,5.02529398202486,2.8138130501584,5.19514042441154,7.07108605136802,5.26775218956681,6.52398060388552,1.66597625333005,3.6274348851257,7.8263411949453,0.860423876981386,0,0,1.29955283489534,0,1.82577746171277,0.170430322578058,0,0.70667914902068,5.21120653173718,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0,0.68510327831436,5.95557132388495,5.64080128446334,2.77576522825817,2.43572382649713,4.15107895060905,2.71300752994721,3.76283862834255,2.38766523526383,1.23597483867187,4.33798070759735,3.5384422077995,1.7794353494215,2.20841518460394,4.363877278217,0,10.5401086924157,6.49284791121711,1.27728527604296,0,0,0.127070227073065,9.8861822007183,7.77751024791665,10.0523481690292,11.9938780932671,10.2286182932132,9.14267396062064,9.5722345209977,4.07357455401265,3.11017426525233,1.76905930903572,2.31486041475121,3.77349284591841,4.13823787980251,8.28285797104606,5.57607825992146,5.30684693380357,4.61209393025459,4.68508622798644,5.95017752699736,1.94011193639558,3.40390944302075,6.862093842394,5.04150184583422,8.06337022754234,7.66154766348766,4.93877127379064,2.9855140022774,0,0,0,3.10688658803253,3.75241695969754,3.42117916775928,4.26140524053378,3.54175617145327,3.08534225774756,3.48800917125612,3.21928081679543,3.26942958628075,3.29119699826961,2.62667942526552,3.08061476274252,3.07019973593198,3.51280184465681,1.8788898626452,13.8791366052324,14.097931895962,0,0,2.13288250535234,3.0190767341857,2.57734922644187,1.81515172161008,2.89091456998331,1.33157938278791,0.949058123089023,1.81168850196412,2.5133520880027,1.98956472041151,2.72949721966768,0.898819408654221,2.37751854862164,0.995706366271836,2.27601481143698,1.5994791765362,1.1270773567308,3.05476991767971,3.68509725618489,3.15611189506434,4.55303067294652,1.32849133181642,2.19798218977925,1.60416313098341,0.592905254174298,0.667380422864376,0.786235980452812,1.34917267430912,0.608580364165509,0.241177159752417,0.25462585178142,1.15078454980324,0.486405680325106,0.274561413188081,0,0.372140947668503,0.936113019343682,1.01031551178845,0.538192240565737,1.4473305640901,5.35784251483154,1.51593129416388,3.91115943460862,4.07388205860452,3.52035372432753,1.84256883185997,4.28478553594825,2.53673742215138,5.35959489961049,5.75808193086815,6.37819074629948,6.06294264448231,3.9717545829156,4.48412081602686,0,0,1.47529281905711,3.86311444826625,6.58257418949947,8.90808818100744,0.327869890753351,2.27223834483936,1.89304931649754,1.17131623288992,0.861693590931196,1.43381278771531,3.56477878531831,2.26461224631066,2.02405350837447,0.876767573733936,2.37172666767914,15.7447445046685,4.9679029822894,5.1639025063504,4.72372182125371,6.59880491890142,2.65490276679926,3.64170954232472,1.209294227859,1.32023555829129,4.72483028609236,3.07435147943927,3.6179961043551,2.18120237686503,1.78248689192361,1.26414703174326,1.05418608574999,0,12.2558258071364,2.88097750450096,6.46793418913772,6.21577401591618,11.1724347194632,7.13475270408282,5.75921572107423,10.656273219011,0.704015124191131,0.42366414172764,0.882113592219848,4.122156323537,5.8127193610526,3.01564624640779,2.50681922406587,3.61109979439135,1.1659233465194,7.6024373824309,0.683483523191411,1.03193433981611,3.51869602002452,0.941842285023455,0.683471138605126,0.457556346413045,0.169978429993855,0.419854356970974,0.552799895217695,0,2.68885594543965,3.04979200690273,2.80813886136683,4.18176592028937,2.62035076495413,2.83215127408124,3.71940550764012,1.30877970992015,0.648074866458964,2.4853572523477,0,4.18646328923141,2.97825282822776,3.30567020184881,4.39143399824286,4.22390313726945,8.9191501370773,2.604087696879,1.99232754408851,0.241584120826006,0.576060012515731,0.316011120628178,2.02725215290164,2.05421914329655,1.94881234466693,0.895133478337407,0,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.504130925684203,0.38983152295901,0.192423683280659,0,4.53460767230423,0,0,0,7.53439416725543,4.69206188627955,5.49454872801795,3.42989406526505,1.00314420807073,7.34177395402186,10.1271552031579,8.59343270159095,8.93636548187176,10.2762377965596,9.82012066606611,9.45031500324528,5.8541756419148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| ||
|short_description=p1@Pcdhgb1 | |||
}} | }} |
Latest revision as of 05:52, 27 September 2015
Short description: | p1@Pcdhgb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhgb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1715 |
Association with transcript: | -150bp_to_NM_033574, uc008eqo.1_5end |
EntrezGene: | Pcdhgb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.46e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-07 | 23 |