FFCP PHASE1:Mm9::chr13:20182126..20182154,+: Difference between revisions
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{{FFCP|EntrezGene=140580|HGNC=|MCL_coexpression_id=2826|UniProt=Q8BPU7|association_with_transcript=-221bp_to_NM_080288_5end|description=CAGE_peak_12_at_Elmo1_5end|id=chr13:20182126..20182154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,1.69e-07,9;CL:0000789,1.69e-07,9;CL:0002420,1.69e-07,9;CL:0002419,1.69e-07,9;CL:0000790,1.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!9.79e-08!86;UBERON:0000153!1.51e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.66e-11,54;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0001016,3.64e-09,75;UBERON:0000955,7.05e-09,47;UBERON:0006238,7.05e-09,47;UBERON:0001017,1.01e-08,73;UBERON:0002616,3.66e-08,46|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,4.00282302668886,1.267098499365,3.5109678948299,0.513653904676515,0.0797721589953364,2.05440875917447,2.71003247498892,0.333109761815663,0.404950534779652,0,0.157731082679119,1.37114433605739,1.27316895539409,0.935476191661768,0.595745707205312,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,5.07753499407941,2.68875039313971,0,0,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0,1.42825492201902,1.32521124570968,1.46988959057945,1.53352753629178,2.75765635983006,7.70811166995721,2.68143409978894,2.61131106535614,0.131886287730194,0,0,2.79182999001381,1.68828783009504,3.20876320331301,0.589257170947335,0.569486723196412,0,2.19605960666234,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0.519572009205738,0,0.985903938436763,3.84979432242953,7.64415719119937,0,0,0,0,0.34255163915718,3.88406825470758,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.61766849947409,0.220841518460394,1.45462575940567,0,7.61230072230023,5.86450779077674,0.510914110417183,1.43778149407104,0.599902730993408,0.635351135365324,5.24267237916879,6.40500843946077,1.63350657746724,1.73824320192276,2.04572365864264,4.77912502486988,4.54275536589721,0.407357455401265,0.870848794270651,0.758168275301024,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.340182495756639,0.384341160854549,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.411564272815887,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.243206428637567,0.877199924551994,0.658650345873152,0.268412837520744,2.10289948564127,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0.397912944082302,0.58489226135736,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.509235257325564,0.704070744865506,0.502518772325447,0.952174563544055,0.585400943573396,0.472905432318573,1.10732344824387,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,5.13761887960934,5.62616095642575,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.92792789853084,2.55492153374884,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0.98931751764888,1.29171541356724,0.844380948994182,0.119372344003136,0.492422699235184,0.291480836629851,8.71498919449395,0.683483523191411,0.206386867963223,0.185194527369712,0,0.820165366326151,0.228778173206523,2.88963330989554,1.6794174278839,2.07299960706636,0,0,0,0,0.418176592028937,0.218362563746178,0,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.904118764344118,0.675824501963113,0.58678619322877,0.911430693907651,0.838874755405687,0.724752362478018,0.288030006257865,0.632022241256357,0.202725215290164,0.410843828659309,0.649604114888975,0.179026695667481,0.993406773906324,0.360586348559907,0.590758108698309,0.605798699688886,0.15241361331,0.504130925684203,0.584747284438515,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,2.82375921308533,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0.103787347584177,0,0.512200817262403,0.729320151204882,0.838452650511929,0.183843508450014,1.55572709461131,0.206035057238894,0.962757628775446,1.76888048234658,1.77435509923168,0.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140580 | |||
|HGNC= | |||
|MCL_coexpression_id=2826 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BPU7 | |||
|association_with_transcript=-221bp_to_NM_080288_5end | |||
|cluster_id=chr13:20182126..20182154,+ | |||
|description=CAGE_peak_12_at_Elmo1_5end | |||
|id=chr13:20182126..20182154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.69e-07,9;CL:0000789,1.69e-07,9;CL:0002420,1.69e-07,9;CL:0002419,1.69e-07,9;CL:0000790,1.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!9.79e-08!86;UBERON:0000153!1.51e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.66e-11,54;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0001016,3.64e-09,75;UBERON:0000955,7.05e-09,47;UBERON:0006238,7.05e-09,47;UBERON:0001017,1.01e-08,73;UBERON:0002616,3.66e-08,46 | |||
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,4.00282302668886,1.267098499365,3.5109678948299,0.513653904676515,0.0797721589953364,2.05440875917447,2.71003247498892,0.333109761815663,0.404950534779652,0,0.157731082679119,1.37114433605739,1.27316895539409,0.935476191661768,0.595745707205312,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0.418531630736908,0,1.0470474879476,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,5.07753499407941,2.68875039313971,0,0,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0,1.42825492201902,1.32521124570968,1.46988959057945,1.53352753629178,2.75765635983006,7.70811166995721,2.68143409978894,2.61131106535614,0.131886287730194,0,0,2.79182999001381,1.68828783009504,3.20876320331301,0.589257170947335,0.569486723196412,0,2.19605960666234,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0.519572009205738,0,0.985903938436763,3.84979432242953,7.64415719119937,0,0,0,0,0.34255163915718,3.88406825470758,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.61766849947409,0.220841518460394,1.45462575940567,0,7.61230072230023,5.86450779077674,0.510914110417183,1.43778149407104,0.599902730993408,0.635351135365324,5.24267237916879,6.40500843946077,1.63350657746724,1.73824320192276,2.04572365864264,4.77912502486988,4.54275536589721,0.407357455401265,0.870848794270651,0.758168275301024,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.340182495756639,0.384341160854549,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.411564272815887,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.243206428637567,0.877199924551994,0.658650345873152,0.268412837520744,2.10289948564127,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0.397912944082302,0.58489226135736,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.509235257325564,0.704070744865506,0.502518772325447,0.952174563544055,0.585400943573396,0.472905432318573,1.10732344824387,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,5.13761887960934,5.62616095642575,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.92792789853084,2.55492153374884,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0.98931751764888,1.29171541356724,0.844380948994182,0.119372344003136,0.492422699235184,0.291480836629851,8.71498919449395,0.683483523191411,0.206386867963223,0.185194527369712,0,0.820165366326151,0.228778173206523,2.88963330989554,1.6794174278839,2.07299960706636,0,0,0,0,0.418176592028937,0.218362563746178,0,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.904118764344118,0.675824501963113,0.58678619322877,0.911430693907651,0.838874755405687,0.724752362478018,0.288030006257865,0.632022241256357,0.202725215290164,0.410843828659309,0.649604114888975,0.179026695667481,0.993406773906324,0.360586348559907,0.590758108698309,0.605798699688886,0.15241361331,0.504130925684203,0.584747284438515,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,2.82375921308533,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0.103787347584177,0,0.512200817262403,0.729320151204882,0.838452650511929,0.183843508450014,1.55572709461131,0.206035057238894,0.962757628775446,1.76888048234658,1.77435509923168,0.943131706930381,0.936415074698824,0.576226371643824,0.631790158511746,0.952587382566147,0.347652977834566,0.964546102318525,1.23625770240992,1.03039244094078,0.342869252385415,1.06485483695602,0.953744759789284,1.16277133305863,1.03520318456864,0.592302255241736,1.46342378298218,0.789209134313529,0.543216455383447,0.561142271657738,1.06771516311757,0.788035859004508,1.22769312950907,1.54936841185966,1.35034627686799,0.249810577937946,0,0.214871054048298,1.14772999241306,0.661774257358546,0.231867835620421 | |||
|short_description=p12@Elmo1 | |||
}} |
Latest revision as of 05:50, 27 September 2015
Short description: | p12@Elmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Elmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2826 |
Association with transcript: | -221bp_to_NM_080288_5end |
EntrezGene: | Elmo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.69e-07 | 9 |
alpha-beta T cell | 1.69e-07 | 9 |
immature T cell | 1.69e-07 | 9 |
mature T cell | 1.69e-07 | 9 |
immature alpha-beta T cell | 1.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.66e-11 | 54 |
neural tube | 2.17e-09 | 52 |
neural rod | 2.17e-09 | 52 |
future spinal cord | 2.17e-09 | 52 |
neural keel | 2.17e-09 | 52 |
nervous system | 3.64e-09 | 75 |
brain | 7.05e-09 | 47 |
future brain | 7.05e-09 | 47 |
central nervous system | 1.01e-08 | 73 |
regional part of brain | 3.66e-08 | 46 |