FFCP PHASE1:Mm9::chr6:41988373..41988399,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:41988373..41988399,+
|short_description=p1@Sva
|description=CAGE_peak_1_at_Sva_5end
|association_with_transcript=0bp_to_ENSMUST00000024059,ENSMUST000001174...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20939 | |EntrezGene=20939 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=Q3SXH3,E9PX96 | |UniProt=Q3SXH3,E9PX96 | ||
|association_with_transcript=0bp_to_ENSMUST00000024059,ENSMUST00000117406,NM_009299,uc009bql.2_5end | |||
|cluster_id=chr6:41988373..41988399,+ | |||
|description=CAGE_peak_1_at_Sva_5end | |||
|id=chr6:41988373..41988399,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010147!3.08e-19!2;UBERON:0003937!3.08e-19!2;UBERON:0005399!3.08e-19!2;UBERON:0000161!1.74e-16!5;UBERON:0000162!9.50e-13!3;UBERON:0001353!9.50e-13!3;UBERON:0000163!9.50e-13!3;UBERON:0006866!9.50e-13!3;UBERON:0001046!9.50e-13!3;UBERON:0000164!9.50e-13!3;UBERON:0000931!9.50e-13!3;UBERON:0000998!1.63e-10!1;UBERON:0007194!1.63e-10!1;UBERON:0006868!1.63e-10!1;UBERON:0003064!1.97e-10!14;UBERON:0002367!2.01e-10!1;UBERON:0009846!2.01e-10!1;UBERON:0003353!2.01e-10!1;UBERON:0004902!2.01e-10!1;UBERON:0003820!2.01e-10!1;UBERON:0009847!2.01e-10!1;UBERON:0001044!4.59e-10!1;UBERON:0001736!4.59e-10!1;UBERON:0003293!4.59e-10!1;UBERON:0003294!4.59e-10!1;UBERON:0010047!4.59e-10!1;UBERON:0001829!4.59e-10!1;UBERON:0000167!4.59e-10!1;UBERON:0006298!4.59e-10!1;UBERON:0001255!6.88e-10!1;UBERON:0001556!6.88e-10!1;UBERON:0000080!9.37e-10!4;UBERON:0005904!9.37e-10!4;UBERON:0006947!9.37e-10!4;UBERON:0002120!9.37e-10!4;UBERON:0004054!9.37e-10!4;UBERON:0004875!9.37e-10!4;UBERON:0004876!9.37e-10!4;UBERON:0005721!9.37e-10!4;UBERON:0005754!9.37e-10!4;UBERON:0007297!9.37e-10!4;UBERON:0006554!3.62e-09!16;UBERON:0001008!1.20e-08!17;UBERON:0007023!3.98e-08!51;UBERON:0004122!5.11e-08!5;UBERON:0000058!8.54e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010147,1.73e-30,2;UBERON:0003937,1.73e-30,2;UBERON:0005399,1.73e-30,2;UBERON:0000998,3.44e-16,1;UBERON:0007194,3.44e-16,1;UBERON:0006868,3.44e-16,1;UBERON:0002367,4.83e-16,1;UBERON:0009846,4.83e-16,1;UBERON:0003353,4.83e-16,1;UBERON:0004902,4.83e-16,1;UBERON:0003820,4.83e-16,1;UBERON:0009847,4.83e-16,1;UBERON:0001044,1.86e-15,1;UBERON:0001736,1.86e-15,1;UBERON:0003293,1.86e-15,1;UBERON:0003294,1.86e-15,1;UBERON:0001829,1.86e-15,1;UBERON:0010047,1.86e-15,1;UBERON:0000167,1.86e-15,1;UBERON:0006298,1.86e-15,1;UBERON:0000161,1.41e-12,5;UBERON:0000165,2.13e-08,2;UBERON:0000166,2.13e-08,2;UBERON:0000930,2.13e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8766450506378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,356.447938294386,0,0,0,0,0,0,0,0,0,0,868.825140782327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1414.24861672647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,104712.205015255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8766450506378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,356.447938294386,0,0,0,0,0,0,0,0,0,0,868.825140782327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1414.24861672647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,104712.205015255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Sva | |||
}} | }} |
Latest revision as of 05:41, 27 September 2015
Short description: | p1@Sva |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sva_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | 0bp_to_ENSMUST00000024059, ENSMUST00000117406, NM_009299, uc009bql.2_5end |
EntrezGene: | Sva |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male accessory sex gland | 1.73e-30 | 2 |
sex gland | 1.73e-30 | 2 |
male reproductive gland | 1.73e-30 | 2 |
seminal vesicle | 3.44e-16 | 1 |
vesicular gland | 3.44e-16 | 1 |
seminal fluid secreting gland | 3.44e-16 | 1 |
prostate gland | 4.83e-16 | 1 |
embryonic cloacal epithelium | 4.83e-16 | 1 |
epithelium of hindgut | 4.83e-16 | 1 |
urogenital sinus epithelium | 4.83e-16 | 1 |
prostate bud | 4.83e-16 | 1 |
prostate field | 4.83e-16 | 1 |
saliva-secreting gland | 1.86e-15 | 1 |
submandibular gland | 1.86e-15 | 1 |
gland of oral region | 1.86e-15 | 1 |
gland of foregut | 1.86e-15 | 1 |
major salivary gland | 1.86e-15 | 1 |
oral gland | 1.86e-15 | 1 |
oral cavity | 1.86e-15 | 1 |
submandibular gland primordium | 1.86e-15 | 1 |
orifice | 1.41e-12 | 5 |
mouth | 2.13e-08 | 2 |
oral opening | 2.13e-08 | 2 |
stomodeum | 2.13e-08 | 2 |