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FFCP PHASE1:Mm9::chr4:77857853..77857903,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19266
|EntrezGene=19266
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8BNN7
|UniProt=Q8BNN7
|association_with_transcript=0bp_to_ENSMUST00000105150,ENSMUST00000140422_5end
|association_with_transcript=0bp_to_ENSMUST00000105150,ENSMUST00000140422_5end
|cluster_id=chr4:77857853..77857903,-
|description=CAGE_peak_3_at_Ptprd_5end
|description=CAGE_peak_3_at_Ptprd_5end
|id=chr4:77857853..77857903,-
|id=chr4:77857853..77857903,-
|ontology_enrichment_celltype=CL:0000117!2.16e-16!23;CL:0000337!2.16e-16!23;CL:0000540!1.33e-15!33;CL:0000047!1.33e-15!33;CL:0000031!1.33e-15!33;CL:0000404!1.33e-15!33;CL:0000393!7.09e-12!39;CL:0000211!7.09e-12!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!2.16e-09!43;CL:0000055!5.97e-07!50
|ontology_enrichment_celltype=CL:0000117!2.16e-16!23;CL:0000337!2.16e-16!23;CL:0000540!1.33e-15!33;CL:0000047!1.33e-15!33;CL:0000031!1.33e-15!33;CL:0000404!1.33e-15!33;CL:0000393!7.09e-12!39;CL:0000211!7.09e-12!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!2.16e-09!43;CL:0000055!5.97e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-21,23;CL:0000337,1.08e-21,23;CL:0000540,1.73e-13,33;CL:0000047,1.73e-13,33;CL:0000031,1.73e-13,33;CL:0000404,1.73e-13,33;CL:0000393,3.74e-10,39;CL:0000211,3.74e-10,39;CL:0000221,7.97e-09,44;CL:0000133,7.97e-09,44;CL:0002319,1.73e-08,43;CL:0002609,5.86e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.17e-26!73;UBERON:0005743!2.17e-26!73;UBERON:0002346!2.69e-26!71;UBERON:0003075!2.69e-26!71;UBERON:0007284!2.69e-26!71;UBERON:0000073!1.39e-25!75;UBERON:0001016!1.39e-25!75;UBERON:0003056!2.25e-24!49;UBERON:0001049!2.70e-24!52;UBERON:0005068!2.70e-24!52;UBERON:0006241!2.70e-24!52;UBERON:0007135!2.70e-24!52;UBERON:0000033!7.67e-24!63;UBERON:0004121!1.04e-23!102;UBERON:0000924!1.04e-23!102;UBERON:0006601!1.04e-23!102;UBERON:0000955!7.62e-23!50;UBERON:0006238!7.62e-23!50;UBERON:0002616!2.62e-22!49;UBERON:0003080!2.77e-22!40;UBERON:0002020!5.08e-22!34;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002791!1.63e-18!29;UBERON:0003528!1.63e-18!29;UBERON:0001893!1.63e-18!29;UBERON:0000956!2.66e-13!21;UBERON:0001869!2.66e-13!21;UBERON:0000203!2.66e-13!21;UBERON:0007811!1.13e-11!86;UBERON:0000153!8.91e-11!94;UBERON:0002619!2.15e-10!17;UBERON:0002021!1.16e-09!10;UBERON:0000411!1.16e-09!10;UBERON:0001950!1.16e-09!10
|ontology_enrichment_uberon=UBERON:0001017!2.17e-26!73;UBERON:0005743!2.17e-26!73;UBERON:0002346!2.69e-26!71;UBERON:0003075!2.69e-26!71;UBERON:0007284!2.69e-26!71;UBERON:0000073!1.39e-25!75;UBERON:0001016!1.39e-25!75;UBERON:0003056!2.25e-24!49;UBERON:0001049!2.70e-24!52;UBERON:0005068!2.70e-24!52;UBERON:0006241!2.70e-24!52;UBERON:0007135!2.70e-24!52;UBERON:0000033!7.67e-24!63;UBERON:0004121!1.04e-23!102;UBERON:0000924!1.04e-23!102;UBERON:0006601!1.04e-23!102;UBERON:0000955!7.62e-23!50;UBERON:0006238!7.62e-23!50;UBERON:0002616!2.62e-22!49;UBERON:0003080!2.77e-22!40;UBERON:0002020!5.08e-22!34;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002791!1.63e-18!29;UBERON:0003528!1.63e-18!29;UBERON:0001893!1.63e-18!29;UBERON:0000956!2.66e-13!21;UBERON:0001869!2.66e-13!21;UBERON:0000203!2.66e-13!21;UBERON:0007811!1.13e-11!86;UBERON:0000153!8.91e-11!94;UBERON:0002619!2.15e-10!17;UBERON:0002021!1.16e-09!10;UBERON:0000411!1.16e-09!10;UBERON:0001950!1.16e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.67e-33,54;UBERON:0002346,5.99e-31,64;UBERON:0003075,5.99e-31,64;UBERON:0007284,5.99e-31,64;UBERON:0001049,1.20e-30,52;UBERON:0005068,1.20e-30,52;UBERON:0006241,1.20e-30,52;UBERON:0007135,1.20e-30,52;UBERON:0002020,5.10e-30,34;UBERON:0003056,5.77e-29,49;UBERON:0003080,5.88e-28,40;UBERON:0001017,1.21e-27,73;UBERON:0002780,5.14e-27,39;UBERON:0001890,5.14e-27,39;UBERON:0006240,5.14e-27,39;UBERON:0001016,2.05e-26,75;UBERON:0000955,4.50e-26,47;UBERON:0006238,4.50e-26,47;UBERON:0010371,5.77e-26,73;UBERON:0002616,2.29e-25,46;UBERON:0003528,3.11e-25,29;UBERON:0002791,3.11e-25,29;UBERON:0001893,3.11e-25,29;UBERON:0004121,5.76e-24,95;UBERON:0000924,5.76e-24,95;UBERON:0006601,5.76e-24,95;UBERON:0000956,3.94e-18,21;UBERON:0001869,3.94e-18,21;UBERON:0000203,3.94e-18,21;UBERON:0010314,9.56e-18,92;UBERON:0002619,3.69e-14,17;UBERON:0002021,1.50e-12,10;UBERON:0000411,1.50e-12,10;UBERON:0001950,1.50e-12,10;UBERON:0002420,3.59e-08,8;UBERON:0007245,3.59e-08,8;UBERON:0010009,3.59e-08,8;UBERON:0010011,3.59e-08,8;UBERON:0000454,3.59e-08,8
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,21.4455448511174,19.5726662330652,18.3811107016792,0,0,0,0.988866362566974,0.7104801149461,0,0,24.4707485048007,20.3858966880853,19.5602214056785,13.139945282575,10.3808214247258,17.3936934885235,12.172374819316,18.3843757322004,12.1127469099328,15.1947932321373,11.6740965274745,20.1786020227197,17.7486028588675,21.3574481928272,6.14202597803038,16.3201156909187,13.2934475565825,27.6950870345248,28.7590795214188,13.7935589910722,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,15.7280171375064,11.8950156732843,25.6334878310243,32.3313235557634,39.3801804288709,7.2725815595846,15.412919991437,0,0,0,0.420883711772948,0.260240885925407,1.83921683546778,1.62055916824814,2.26057226753573,3.33378845841506,2.94661556655154,2.52994656311268,2.84573707812917,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0.696504333044333,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,16.4026159880019,14.5095503454791,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,6.91548950893999,0,0,0,0.390438744296638,1.29254038639679,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,7.06906896127976,0,0,0,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,7.83011093233712,0.540183282093931,0.646793418913773,1.71469628025274,2.12808280370728,1.96205699362278,2.46823530903181,1.522324745573,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.387479470433193,0,0.234714477291508,0.911430693907651,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,58.7341916321749,53.8580526713397,52.1334917229851,46.9159187798267,53.4364365421101,61.9422995859554,49.2766425169218,53.5882231836822,60.2679403948992,60.0601961632111,0.415149390336707,7.18244772121856,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,7.55638874525492,9.06554251851134,8.98573786857083,5.30664144703975,6.33698249725599,5.65879024158229,6.74218853783153,6.6586158501064,7.46661096422972,6.19181798667996,7.18482820858104,6.36600427530227,7.82963211526283,5.5935589651071,6.17164654293748,7.27650805253284,6.91464950847231,5.52316383202848,6.30532848782715,6.76916863133412,7.68297486065645,7.3659519202596,6.3827933507555,6.17256498823512,6.64356101495375,6.79680928391388,4.50154147486658,7.2820315357404,4.82266527452853,11.4912865851455,4.21076895201735,5.15690529715916,1.53030665655075,0.882365676478062,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,21.4455448511174,19.5726662330652,18.3811107016792,0,0,0,0.988866362566974,0.7104801149461,0,0,24.4707485048007,20.3858966880853,19.5602214056785,13.139945282575,10.3808214247258,17.3936934885235,12.172374819316,18.3843757322004,12.1127469099328,15.1947932321373,11.6740965274745,20.1786020227197,17.7486028588675,21.3574481928272,6.14202597803038,16.3201156909187,13.2934475565825,27.6950870345248,28.7590795214188,13.7935589910722,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,15.7280171375064,11.8950156732843,25.6334878310243,32.3313235557634,39.3801804288709,7.2725815595846,15.412919991437,0,0,0,0.420883711772948,0.260240885925407,1.83921683546778,1.62055916824814,2.26057226753573,3.33378845841506,2.94661556655154,2.52994656311268,2.84573707812917,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0.696504333044333,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,16.4026159880019,14.5095503454791,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,6.91548950893999,0,0,0,0.390438744296638,1.29254038639679,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,7.06906896127976,0,0,0,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,7.83011093233712,0.540183282093931,0.646793418913773,1.71469628025274,2.12808280370728,1.96205699362278,2.46823530903181,1.522324745573,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.387479470433193,0,0.234714477291508,0.911430693907651,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,58.7341916321749,53.8580526713397,52.1334917229851,46.9159187798267,53.4364365421101,61.9422995859554,49.2766425169218,53.5882231836822,60.2679403948992,60.0601961632111,0.415149390336707,7.18244772121856,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,7.55638874525492,9.06554251851134,8.98573786857083,5.30664144703975,6.33698249725599,5.65879024158229,6.74218853783153,6.6586158501064,7.46661096422972,6.19181798667996,7.18482820858104,6.36600427530227,7.82963211526283,5.5935589651071,6.17164654293748,7.27650805253284,6.91464950847231,5.52316383202848,6.30532848782715,6.76916863133412,7.68297486065645,7.3659519202596,6.3827933507555,6.17256498823512,6.64356101495375,6.79680928391388,4.50154147486658,7.2820315357404,4.82266527452853,11.4912865851455,4.21076895201735,5.15690529715916,1.53030665655075,0.882365676478062,0.695603506861264
|short_description=p3@Ptprd
|short_description=p3@Ptprd
}}
}}

Latest revision as of 05:30, 27 September 2015

Short description:p3@Ptprd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ptprd_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000105150, ENSMUST00000140422_5end
EntrezGene:Ptprd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ptprd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C321.45
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.79
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.73
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F125.63
cortex, adult.CNhs10473.12-14D532.33
cortex, neonate N30.CNhs11107.1392-42F239.38
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G114.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D746.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A753.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A860.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A960.06
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.67e-3354
neurectoderm5.99e-3164
neural plate5.99e-3164
presumptive neural plate5.99e-3164
neural tube1.20e-3052
neural rod1.20e-3052
future spinal cord1.20e-3052
neural keel1.20e-3052
gray matter5.10e-3034
pre-chordal neural plate5.77e-2949
anterior neural tube5.88e-2840
central nervous system1.21e-2773
regional part of forebrain5.14e-2739
forebrain5.14e-2739
future forebrain5.14e-2739
nervous system2.05e-2675
brain4.50e-2647
future brain4.50e-2647
ecto-epithelium5.77e-2673
regional part of brain2.29e-2546
brain grey matter3.11e-2529
regional part of telencephalon3.11e-2529
telencephalon3.11e-2529
ectoderm-derived structure5.76e-2495
ectoderm5.76e-2495
presumptive ectoderm5.76e-2495
cerebral cortex3.94e-1821
cerebral hemisphere3.94e-1821
pallium3.94e-1821
structure with developmental contribution from neural crest9.56e-1892
regional part of cerebral cortex3.69e-1417
occipital lobe1.50e-1210
visual cortex1.50e-1210
neocortex1.50e-1210
basal ganglion3.59e-088
nuclear complex of neuraxis3.59e-088
aggregate regional part of brain3.59e-088
collection of basal ganglia3.59e-088
cerebral subcortex3.59e-088
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