FFCP PHASE1:Mm9::chr9:82869082..82869100,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:82869082..82869100,- to FFCP PHASE1:Mm9::chr9:82869082..82869100,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=83946 | |EntrezGene=83946 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8VQ93,E9Q2R2,Q8VDD9,Q3UW86,Q8BRF9 | |UniProt=F8VQ93,E9Q2R2,Q8VDD9,Q3UW86,Q8BRF9 | ||
|association_with_transcript=0bp_to_ENSMUST00000034787,ENSMUST00000167283,NM_001081216,uc009qvv.1,uc009qvw.1,uc009qvy.1,uc009qwa.1,uc009qwb.1_5end | |||
|cluster_id=chr9:82869082..82869100,- | |||
|description=CAGE_peak_2_at_Phip_5end | |||
|id=chr9:82869082..82869100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.20e-07!71;UBERON:0003075!1.20e-07!71;UBERON:0007284!1.20e-07!71;UBERON:0000033!4.36e-07!63;UBERON:0004121!6.88e-07!102;UBERON:0000924!6.88e-07!102;UBERON:0006601!6.88e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.76e-07,64;UBERON:0003075,1.76e-07,64;UBERON:0007284,1.76e-07,64;UBERON:0010371,2.09e-07,73 | |||
|phase1_expression=2.40223270657191,0.697950815278722,1.81999695755814,1.51232105653415,2.00358291978539,1.6787927191189,0.467225281191051,3.61545305636414,1.68946466582,1.17032263160997,0.68487187290202,1.11681022593471,3.76641605848653,4.28359971853087,3.33109761815663,4.656931149966,4.89693314689703,7.25562980323947,5.34746291062381,4.2438965179803,2.55129870453209,2.78014663362479,1.82839852397255,0.639969691173627,1.14704640533585,0,1.7230479846363,0.861884930743556,0.570070258369122,1.76421090831952,2.21730510655305,1.27006134691926,1.84519436275371,0,2.59966457776147,1.99481574430191,2.24586291888606,10.4632907684227,2.3440060335714,6.80580867165938,9.41170380849623,6.14740936462601,6.311634589405,1.88845226963366,1.92616169317078,1.28482726513177,2.34717403304412,0.218025156380447,0.439372365468944,1.74986909166855,0.979904951377538,1.43752564364972,4.36234775750115,5.80289713609076,2.35265659399725,1.02903774414379,1.43266719969378,1.54701627683233,3.03474691289397,1.05798195854407,4.43681982454325,1.0165335962074,1.77858959222228,1.7997994345628,0.988866362566974,2.1314403448383,1.49800055259202,0.768436610643109,2.69592992002042,2.16009501330705,2.73422449756797,3.14216082844184,1.10434270475807,3.1847607795888,2.39613677545591,3.67687514644008,9.91042928994498,2.80912143787413,2.91852413186863,3.16527090552465,2.19570344645783,6.25096044668112,1.67509799400829,4.50210088025344,2.59757021220577,6.48182888042069,4.9830088279686,4.65998614563251,1.59025005999687,1.88928900266964,4.34796733052517,0,0,0.539703191637817,0,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,2.67602497575693,1.28326477414318,0,7.11066703153331,1.5154372870785,0.506719730950197,1.01104889002957,0.79928715803342,4.91981978929626,2.9688427812965,3.29622120855658,3.65358573974569,1.38369298353635,3.76806601381556,3.99801604261396,2.13633205260448,1.73036477414062,2.60278842455841,1.76922110389975,2.58826959915855,1.54589062922275,0.969750506270444,3.72783522436244,6.73395833126558,7.54008144528438,2.55457055208591,2.03685711660064,4.19931911695385,1.65191295194984,4.34392854273986,3.66000482254901,5.02617408451458,4.51943232499919,4.34716277461562,2.70124457927428,3.73154905055843,3.05518091550949,2.86136032403214,2.77995034277042,2.52530227063769,4.81445638962004,5.28774840196988,3.24111833649629,3.61691562805716,6.12328492361951,6.27757229395764,6.74652416830048,6.72628763921441,1.94011193639558,5.8622884852024,5.27853372491847,3.94552318369635,4.44875598760957,1.0447564995665,1.4404749548556,2.58744546864041,2.80885274925294,1.28673953557358,3.6941254921427,2.89976081549703,1.64168241986767,2.88099298337624,2.84093682702252,4.32881309844288,2.1597395804233,1.16266972375204,2.14618721119695,2.33530684734339,3.45575684818309,2.62667942526552,2.67527071501324,2.04679982395465,2.41505126820156,1.8788898626452,2.73376933133365,3.70456604565424,0,1.85115396664481,3.41261200856374,4.18026009348789,2.96395161040815,2.62188582010345,1.33426826306922,1.14135375667535,1.89811624617805,1.81168850196412,2.5133520880027,4.37704238490532,2.53453313254856,2.69645822596266,1.08069024937347,2.19055400579804,1.51734320762465,2.85621281524322,1.1270773567308,1.62921062276251,1.74557238450863,3.57692681440625,2.08680572510049,1.47610147979602,1.41298855057237,1.85095745882701,1.1858105083486,2.50267658574141,3.14494392181125,1.79889689907883,3.04290182082754,4.58236603529592,3.31013607315846,0.863088412352432,4.21551589615092,1.09824565275233,7.18841032636773,1.48856379067401,2.49630138491648,0.757736633841335,1.07638448113147,1.4473305640901,2.95605104266567,2.84237117655727,3.58522948172457,3.56464680127895,2.58159273117352,3.51763140627813,2.38043640886014,1.95133647857799,2.67979744980525,2.87904096543407,3.02964060449226,2.29408640602033,1.89953480052485,2.60368305446721,0,2.17562273527484,2.95058563811422,1.93155722413313,3.05046120976805,2.81308047821288,0.983609672260053,2.27223834483936,2.2085575359138,4.29482618726302,4.09304455692318,3.58453196928828,4.67877215573028,2.83076530788832,2.02405350837447,4.38383786866968,3.55759000151871,7.06906896127976,4.5420827266646,1.78065603667255,4.23506094319298,3.13443233647817,1.32745138339963,1.21390318077491,2.41858845571801,1.69744571780308,0.590603785761546,2.15204603560749,2.06742634534577,3.63533729477506,2.13898427030833,2.84433082142234,0,4.12542172992747,3.06395645178409,4.50152735078276,2.06973894052407,3.42939256050548,3.72414490648775,4.63758925765383,3.62007845324666,0.913394847343798,1.64270195644597,1.69465656691056,2.64634077665954,3.13283880588812,3.87514624070173,2.53314284698255,3.22305328808468,2.9545361954111,2.62332752966866,3.15223013417866,4.10090113914846,2.68302928352189,2.96311243791539,4.33247451110789,2.46049609897845,3.20289442489132,5.94924504978494,6.01791244991729,5.94259887359022,0.954670618015114,5.53587988766987,3.45643094115643,2.91614420218863,1.46361807210128,2.83871332870031,1.61837215661785,3.30613822901344,2.09404753587224,1.55537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| |phase1_expression=2.40223270657191,0.697950815278722,1.81999695755814,1.51232105653415,2.00358291978539,1.6787927191189,0.467225281191051,3.61545305636414,1.68946466582,1.17032263160997,0.68487187290202,1.11681022593471,3.76641605848653,4.28359971853087,3.33109761815663,4.656931149966,4.89693314689703,7.25562980323947,5.34746291062381,4.2438965179803,2.55129870453209,2.78014663362479,1.82839852397255,0.639969691173627,1.14704640533585,0,1.7230479846363,0.861884930743556,0.570070258369122,1.76421090831952,2.21730510655305,1.27006134691926,1.84519436275371,0,2.59966457776147,1.99481574430191,2.24586291888606,10.4632907684227,2.3440060335714,6.80580867165938,9.41170380849623,6.14740936462601,6.311634589405,1.88845226963366,1.92616169317078,1.28482726513177,2.34717403304412,0.218025156380447,0.439372365468944,1.74986909166855,0.979904951377538,1.43752564364972,4.36234775750115,5.80289713609076,2.35265659399725,1.02903774414379,1.43266719969378,1.54701627683233,3.03474691289397,1.05798195854407,4.43681982454325,1.0165335962074,1.77858959222228,1.7997994345628,0.988866362566974,2.1314403448383,1.49800055259202,0.768436610643109,2.69592992002042,2.16009501330705,2.73422449756797,3.14216082844184,1.10434270475807,3.1847607795888,2.39613677545591,3.67687514644008,9.91042928994498,2.80912143787413,2.91852413186863,3.16527090552465,2.19570344645783,6.25096044668112,1.67509799400829,4.50210088025344,2.59757021220577,6.48182888042069,4.9830088279686,4.65998614563251,1.59025005999687,1.88928900266964,4.34796733052517,0,0,0.539703191637817,0,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,2.67602497575693,1.28326477414318,0,7.11066703153331,1.5154372870785,0.506719730950197,1.01104889002957,0.79928715803342,4.91981978929626,2.9688427812965,3.29622120855658,3.65358573974569,1.38369298353635,3.76806601381556,3.99801604261396,2.13633205260448,1.73036477414062,2.60278842455841,1.76922110389975,2.58826959915855,1.54589062922275,0.969750506270444,3.72783522436244,6.73395833126558,7.54008144528438,2.55457055208591,2.03685711660064,4.19931911695385,1.65191295194984,4.34392854273986,3.66000482254901,5.02617408451458,4.51943232499919,4.34716277461562,2.70124457927428,3.73154905055843,3.05518091550949,2.86136032403214,2.77995034277042,2.52530227063769,4.81445638962004,5.28774840196988,3.24111833649629,3.61691562805716,6.12328492361951,6.27757229395764,6.74652416830048,6.72628763921441,1.94011193639558,5.8622884852024,5.27853372491847,3.94552318369635,4.44875598760957,1.0447564995665,1.4404749548556,2.58744546864041,2.80885274925294,1.28673953557358,3.6941254921427,2.89976081549703,1.64168241986767,2.88099298337624,2.84093682702252,4.32881309844288,2.1597395804233,1.16266972375204,2.14618721119695,2.33530684734339,3.45575684818309,2.62667942526552,2.67527071501324,2.04679982395465,2.41505126820156,1.8788898626452,2.73376933133365,3.70456604565424,0,1.85115396664481,3.41261200856374,4.18026009348789,2.96395161040815,2.62188582010345,1.33426826306922,1.14135375667535,1.89811624617805,1.81168850196412,2.5133520880027,4.37704238490532,2.53453313254856,2.69645822596266,1.08069024937347,2.19055400579804,1.51734320762465,2.85621281524322,1.1270773567308,1.62921062276251,1.74557238450863,3.57692681440625,2.08680572510049,1.47610147979602,1.41298855057237,1.85095745882701,1.1858105083486,2.50267658574141,3.14494392181125,1.79889689907883,3.04290182082754,4.58236603529592,3.31013607315846,0.863088412352432,4.21551589615092,1.09824565275233,7.18841032636773,1.48856379067401,2.49630138491648,0.757736633841335,1.07638448113147,1.4473305640901,2.95605104266567,2.84237117655727,3.58522948172457,3.56464680127895,2.58159273117352,3.51763140627813,2.38043640886014,1.95133647857799,2.67979744980525,2.87904096543407,3.02964060449226,2.29408640602033,1.89953480052485,2.60368305446721,0,2.17562273527484,2.95058563811422,1.93155722413313,3.05046120976805,2.81308047821288,0.983609672260053,2.27223834483936,2.2085575359138,4.29482618726302,4.09304455692318,3.58453196928828,4.67877215573028,2.83076530788832,2.02405350837447,4.38383786866968,3.55759000151871,7.06906896127976,4.5420827266646,1.78065603667255,4.23506094319298,3.13443233647817,1.32745138339963,1.21390318077491,2.41858845571801,1.69744571780308,0.590603785761546,2.15204603560749,2.06742634534577,3.63533729477506,2.13898427030833,2.84433082142234,0,4.12542172992747,3.06395645178409,4.50152735078276,2.06973894052407,3.42939256050548,3.72414490648775,4.63758925765383,3.62007845324666,0.913394847343798,1.64270195644597,1.69465656691056,2.64634077665954,3.13283880588812,3.87514624070173,2.53314284698255,3.22305328808468,2.9545361954111,2.62332752966866,3.15223013417866,4.10090113914846,2.68302928352189,2.96311243791539,4.33247451110789,2.46049609897845,3.20289442489132,5.94924504978494,6.01791244991729,5.94259887359022,0.954670618015114,5.53587988766987,3.45643094115643,2.91614420218863,1.46361807210128,2.83871332870031,1.61837215661785,3.30613822901344,2.09404753587224,1.55537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| ||
|short_description=p2@Phip | |||
}} | }} |
Latest revision as of 05:11, 27 September 2015
Short description: | p2@Phip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Phip_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000034787, ENSMUST00000167283, NM_001081216, uc009qvv.1, uc009qvw.1, uc009qvy.1, uc009qwa.1, uc009qwb.1_5end |
EntrezGene: | Phip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.76e-07 | 64 |
neural plate | 1.76e-07 | 64 |
presumptive neural plate | 1.76e-07 | 64 |
ecto-epithelium | 2.09e-07 | 73 |