Personal tools

FFCP PHASE1:Mm9::chr4:70195904..70195919,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230316
|EntrezGene=230316
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BH27,Q0VGR4
|UniProt=Q8BH27,Q0VGR4
|association_with_transcript=42bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end
|association_with_transcript=42bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end
|cluster_id=chr4:70195904..70195919,-
|description=CAGE_peak_2_at_Megf9_5end
|description=CAGE_peak_2_at_Megf9_5end
|id=chr4:70195904..70195919,-
|id=chr4:70195904..70195919,-
|ontology_enrichment_celltype=CL:0000221!3.22e-08!44;CL:0000133!3.22e-08!44;CL:0002319!1.06e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000221,1.76e-07,44;CL:0000133,1.76e-07,44;CL:0002319,6.44e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.41e-14!102;UBERON:0000924!1.41e-14!102;UBERON:0006601!1.41e-14!102;UBERON:0000073!7.20e-13!75;UBERON:0001016!7.20e-13!75;UBERON:0001017!6.48e-12!73;UBERON:0005743!6.48e-12!73;UBERON:0000033!5.32e-09!63;UBERON:0004111!7.26e-09!122;UBERON:0002346!8.33e-09!71;UBERON:0003075!8.33e-09!71;UBERON:0007284!8.33e-09!71;UBERON:0001049!4.17e-08!52;UBERON:0005068!4.17e-08!52;UBERON:0006241!4.17e-08!52;UBERON:0007135!4.17e-08!52;UBERON:0000025!4.75e-08!114;UBERON:0002020!5.01e-08!34;UBERON:0000955!5.64e-07!50;UBERON:0006238!5.64e-07!50;UBERON:0000483!6.51e-07!181;UBERON:0002616!6.56e-07!49;UBERON:0002791!7.07e-07!29;UBERON:0003528!7.07e-07!29;UBERON:0001893!7.07e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.20e-17,95;UBERON:0000924,7.20e-17,95;UBERON:0006601,7.20e-17,95;UBERON:0001016,8.82e-13,75;UBERON:0010371,2.72e-12,73;UBERON:0001017,1.05e-11,73;UBERON:0002346,2.34e-09,64;UBERON:0003075,2.34e-09,64;UBERON:0007284,2.34e-09,64;UBERON:0000073,2.94e-07,54;UBERON:0002020,4.36e-07,34;UBERON:0001049,4.77e-07,52;UBERON:0005068,4.77e-07,52;UBERON:0006241,4.77e-07,52;UBERON:0007135,4.77e-07,52
|phase1_expression=1.92178616525753,6.2815573375085,4.54999239389536,0.30246421130683,0,3.52546471014969,3.27057696833736,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,1.75991665072747,2.2940928106717,5.7423196411502,4.30761996159075,1.50829862880122,0,0.252030129759931,3.32595765982957,0,0,0,0.288851619751275,0.166234645358492,0,7.95210098400125,3.1253413780952,4.18818995179039,7.64700934440319,7.5135003345429,9.71020706062307,1.00717454380462,0.304130793658544,0.367093504323363,0.782391344348039,3.2703773457067,7.24964403023757,10.6936444490856,1.1198913730029,1.43752564364972,0,0,0,1.02903774414379,0.573066879877513,2.06268836910977,1.01158230429799,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,4.99483796918021,0.518448061542388,0.810035629990144,1.47227472945967,1.99955689082663,2.87129103237098,0.857435594504678,1.24599112323707,0.919218786610021,0,7.66124028511126,5.06901559745603,0.923204014111357,1.09785172322892,1.04182674111352,0.837548997004143,2.8138130501584,1.83357897332172,2.35702868378934,2.70506193518296,1.4911955666024,3.7863096666592,7.85944225110569,1.44932244350839,0,0.679971333707751,3.77792234146472,3.89865850468601,5.37632264516803,0.421333260395256,0,0,0.35333957451034,9.57735254481427,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,3.08296475241462,0.258937883647172,0,0.346970653532272,0,0.691846491768175,0.60289056221049,1.41106448562846,1.75933227861546,0.247194967734374,2.4581890676385,1.76922110389975,1.13236794963186,0.662524555381181,0.969750506270444,0,2.92780797011547,5.23616767033638,0.255457055208591,0.11981512450592,0,0.381210681219194,1.9472783122627,2.28750301409313,1.50785222535437,5.9100268865374,5.8814555185976,6.44142938134636,4.2182728397617,0.712875546952214,0.124406970610093,0.252722758433675,14.5204880561667,0.130120442962704,0.689706313300419,2.34080768746954,1.35634336052144,1.36072998302656,1.7935920839879,1.78033276663485,4.65666067330228,0,0.567318240503458,0.527853372491847,0.43839146485515,0.834141747676794,6.268538997399,6.37924622864625,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.900310307305074,1.42046841351126,0.590292695242212,0.154267112887378,0,0.268273401399619,0.934122738937356,0.493679549740441,0.32833492815819,0.56748166682099,0.730999937126662,1.09775057645525,0.402619256281115,6.51898840548794,1.64647379806855,0.330418782983798,0.264450566663544,0.426576501070468,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.796565093017469,0.569003702859245,0.799739588268102,0,1.22190796707189,1.55161989734101,1.68325967736765,0.948548056863859,0.442830443938806,1.41298855057237,1.85095745882701,4.15033677922008,0.333690211432188,0.393117990226406,1.34917267430912,1.21716072833102,0.482354319504834,0.50925170356284,4.02774592431135,5.67473293712624,2.19649130550465,5.75072826109418,2.97712758134803,6.24075346229121,5.80931419278357,3.58794827043824,9.64887042726734,2.03228509183265,0.568474235311454,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.952174563544055,2.34160377429359,0.630540576424764,1.10732344824387,0.797273843287435,1.96635977658886,0.863424909329478,0.723245292907558,0,0,0,0,1.60550589987792,2.22702204525186,0.327869890753351,0.757412781613119,3.47059041357882,2.73307121007647,5.38558494331997,2.38968797952552,2.89638276307112,1.13230612315533,2.42886421004937,1.75353514746787,2.76701444562566,1.28528526568723,0.283880170416537,0,0.488660878060728,0.164970122972535,0,0,0.906970670894253,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,1.15184314421485,0.913394847343798,0,1.90648863777438,0.220528398054962,17.4779428117969,6.78150592122803,7.59942854094764,7.04296829618505,7.38634048852776,0.582961673259701,3.70850604021019,0.683483523191411,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0.139951452323658,0,2.86401185404534,0.158167996790568,0.609958401380546,0.216010681643603,0.836353184057875,1.74690050996942,2.29269388854195,1.73572257023205,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0.194915761479505,0.288635524920988,0.233753804363138,6.12172035761071,0,0.0897138566094757,0,2.12508553435409,0.187682475451182,0,4.50173596066038,0,3.95326289831947,2.30162618253588,1.71868654031819,2.57779773515531,6.16574267793578,2.2661816921691,3.37511250115903,6.30449684513909,5.43770890781046,5.1776031175182,0,0.399024873401031,0.341467211508268,1.70174701947806,0.419226325255965,0.551530525350042,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,2.07488975524684,1.87283014939765,1.72867911493147,1.95280594449085,2.38146845641537,1.62238056322798,0.77163688185482,2.06042950401653,1.17759136107518,1.37147700954166,1.06485483695602,0.953744759789284,1.16277133305863,0.658765662907314,1.69229215783353,0.73171189149109,2.36762740294059,0.814824683075171,1.12228454331548,1.66089025373844,2.06859412988683,2.86461730218783,2.16911577660352,1.54325288784913,0.749431733813838,2.10538447600868,3.22306581072447,2.48674831689496,2.64709702943419,2.08681052058379
|phase1_expression=1.92178616525753,6.2815573375085,4.54999239389536,0.30246421130683,0,3.52546471014969,3.27057696833736,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,1.75991665072747,2.2940928106717,5.7423196411502,4.30761996159075,1.50829862880122,0,0.252030129759931,3.32595765982957,0,0,0,0.288851619751275,0.166234645358492,0,7.95210098400125,3.1253413780952,4.18818995179039,7.64700934440319,7.5135003345429,9.71020706062307,1.00717454380462,0.304130793658544,0.367093504323363,0.782391344348039,3.2703773457067,7.24964403023757,10.6936444490856,1.1198913730029,1.43752564364972,0,0,0,1.02903774414379,0.573066879877513,2.06268836910977,1.01158230429799,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,4.99483796918021,0.518448061542388,0.810035629990144,1.47227472945967,1.99955689082663,2.87129103237098,0.857435594504678,1.24599112323707,0.919218786610021,0,7.66124028511126,5.06901559745603,0.923204014111357,1.09785172322892,1.04182674111352,0.837548997004143,2.8138130501584,1.83357897332172,2.35702868378934,2.70506193518296,1.4911955666024,3.7863096666592,7.85944225110569,1.44932244350839,0,0.679971333707751,3.77792234146472,3.89865850468601,5.37632264516803,0.421333260395256,0,0,0.35333957451034,9.57735254481427,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,3.08296475241462,0.258937883647172,0,0.346970653532272,0,0.691846491768175,0.60289056221049,1.41106448562846,1.75933227861546,0.247194967734374,2.4581890676385,1.76922110389975,1.13236794963186,0.662524555381181,0.969750506270444,0,2.92780797011547,5.23616767033638,0.255457055208591,0.11981512450592,0,0.381210681219194,1.9472783122627,2.28750301409313,1.50785222535437,5.9100268865374,5.8814555185976,6.44142938134636,4.2182728397617,0.712875546952214,0.124406970610093,0.252722758433675,14.5204880561667,0.130120442962704,0.689706313300419,2.34080768746954,1.35634336052144,1.36072998302656,1.7935920839879,1.78033276663485,4.65666067330228,0,0.567318240503458,0.527853372491847,0.43839146485515,0.834141747676794,6.268538997399,6.37924622864625,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0.900310307305074,1.42046841351126,0.590292695242212,0.154267112887378,0,0.268273401399619,0.934122738937356,0.493679549740441,0.32833492815819,0.56748166682099,0.730999937126662,1.09775057645525,0.402619256281115,6.51898840548794,1.64647379806855,0.330418782983798,0.264450566663544,0.426576501070468,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.796565093017469,0.569003702859245,0.799739588268102,0,1.22190796707189,1.55161989734101,1.68325967736765,0.948548056863859,0.442830443938806,1.41298855057237,1.85095745882701,4.15033677922008,0.333690211432188,0.393117990226406,1.34917267430912,1.21716072833102,0.482354319504834,0.50925170356284,4.02774592431135,5.67473293712624,2.19649130550465,5.75072826109418,2.97712758134803,6.24075346229121,5.80931419278357,3.58794827043824,9.64887042726734,2.03228509183265,0.568474235311454,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.952174563544055,2.34160377429359,0.630540576424764,1.10732344824387,0.797273843287435,1.96635977658886,0.863424909329478,0.723245292907558,0,0,0,0,1.60550589987792,2.22702204525186,0.327869890753351,0.757412781613119,3.47059041357882,2.73307121007647,5.38558494331997,2.38968797952552,2.89638276307112,1.13230612315533,2.42886421004937,1.75353514746787,2.76701444562566,1.28528526568723,0.283880170416537,0,0.488660878060728,0.164970122972535,0,0,0.906970670894253,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,1.15184314421485,0.913394847343798,0,1.90648863777438,0.220528398054962,17.4779428117969,6.78150592122803,7.59942854094764,7.04296829618505,7.38634048852776,0.582961673259701,3.70850604021019,0.683483523191411,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0.139951452323658,0,2.86401185404534,0.158167996790568,0.609958401380546,0.216010681643603,0.836353184057875,1.74690050996942,2.29269388854195,1.73572257023205,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0.194915761479505,0.288635524920988,0.233753804363138,6.12172035761071,0,0.0897138566094757,0,2.12508553435409,0.187682475451182,0,4.50173596066038,0,3.95326289831947,2.30162618253588,1.71868654031819,2.57779773515531,6.16574267793578,2.2661816921691,3.37511250115903,6.30449684513909,5.43770890781046,5.1776031175182,0,0.399024873401031,0.341467211508268,1.70174701947806,0.419226325255965,0.551530525350042,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,2.07488975524684,1.87283014939765,1.72867911493147,1.95280594449085,2.38146845641537,1.62238056322798,0.77163688185482,2.06042950401653,1.17759136107518,1.37147700954166,1.06485483695602,0.953744759789284,1.16277133305863,0.658765662907314,1.69229215783353,0.73171189149109,2.36762740294059,0.814824683075171,1.12228454331548,1.66089025373844,2.06859412988683,2.86461730218783,2.16911577660352,1.54325288784913,0.749431733813838,2.10538447600868,3.22306581072447,2.48674831689496,2.64709702943419,2.08681052058379
|short_description=p2@Megf9
|short_description=p2@Megf9
}}
}}

Latest revision as of 05:06, 27 September 2015

Short description:p2@Megf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Megf9_5end
Coexpression cluster:NA
Association with transcript: 42bp_to_ENSMUST00000107359, NM_172694, uc008tib.1_5end
EntrezGene:Megf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Megf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D93.79
Mouse Schwann, donor2.CNhs12573.11746-123F97.86
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C317.48
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H37.60
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.76e-0744
neurectodermal cell1.76e-0744
neural cell6.44e-0743

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure7.20e-1795
ectoderm7.20e-1795
presumptive ectoderm7.20e-1795
nervous system8.82e-1375
ecto-epithelium2.72e-1273
central nervous system1.05e-1173
neurectoderm2.34e-0964
neural plate2.34e-0964
presumptive neural plate2.34e-0964
regional part of nervous system2.94e-0754
gray matter4.36e-0734
neural tube4.77e-0752
neural rod4.77e-0752
future spinal cord4.77e-0752
neural keel4.77e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:70195904..70195919,-&oldid=4294097"