FFCP PHASE1:Mm9::chr15:82105409..82105464,+: Difference between revisions
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{{FFCP|EntrezGene=24050|HGNC=|MCL_coexpression_id=1|UniProt=Q9Z1S5|association_with_transcript=44bp_to_ENSMUST00000023095,NM_011889,uc007wyq.1_5end|description=CAGE_peak_2_at_Sept3_5end|id=chr15:82105409..82105464,+|ontology_enrichment_celltype=CL:0000540!4.76e-16!33;CL:0000047!4.76e-16!33;CL:0000031!4.76e-16!33;CL:0000404!4.76e-16!33;CL:0002319!7.65e-16!43;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0000117!9.52e-15!23;CL:0000337!9.52e-15!23;CL:0000393!4.14e-13!39;CL:0000211!4.14e-13!39;CL:0000055!7.79e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-19,23;CL:0000337,4.77e-19,23;CL:0000540,5.08e-18,33;CL:0000047,5.08e-18,33;CL:0000031,5.08e-18,33;CL:0000404,5.08e-18,33;CL:0002319,1.05e-17,43;CL:0000221,5.11e-17,44;CL:0000133,5.11e-17,44;CL:0000393,1.30e-13,39;CL:0000211,1.30e-13,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.41e-35!75;UBERON:0001016!3.41e-35!75;UBERON:0001017!1.17e-34!73;UBERON:0005743!1.17e-34!73;UBERON:0004121!2.31e-31!102;UBERON:0000924!2.31e-31!102;UBERON:0006601!2.31e-31!102;UBERON:0002346!1.54e-29!71;UBERON:0003075!1.54e-29!71;UBERON:0007284!1.54e-29!71;UBERON:0001049!7.76e-28!52;UBERON:0005068!7.76e-28!52;UBERON:0006241!7.76e-28!52;UBERON:0007135!7.76e-28!52;UBERON:0000033!1.27e-27!63;UBERON:0000955!4.33e-26!50;UBERON:0006238!4.33e-26!50;UBERON:0002616!1.99e-25!49;UBERON:0003056!6.42e-24!49;UBERON:0002020!1.21e-22!34;UBERON:0003080!2.31e-21!40;UBERON:0002780!1.24e-20!39;UBERON:0001890!1.24e-20!39;UBERON:0006240!1.24e-20!39;UBERON:0002791!5.68e-19!29;UBERON:0003528!5.68e-19!29;UBERON:0001893!5.68e-19!29;UBERON:0000956!3.16e-14!21;UBERON:0001869!3.16e-14!21;UBERON:0000203!3.16e-14!21;UBERON:0007811!1.01e-13!86;UBERON:0000153!1.26e-12!94;UBERON:0002619!4.80e-12!17;UBERON:0002021!4.09e-09!10;UBERON:0000411!4.09e-09!10;UBERON:0001950!4.09e-09!10;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.99e-38,75;UBERON:0001017,5.27e-37,73;UBERON:0000073,2.52e-33,54;UBERON:0002346,4.74e-32,64;UBERON:0003075,4.74e-32,64;UBERON:0007284,4.74e-32,64;UBERON:0004121,9.61e-32,95;UBERON:0000924,9.61e-32,95;UBERON:0006601,9.61e-32,95;UBERON:0001049,1.96e-31,52;UBERON:0005068,1.96e-31,52;UBERON:0006241,1.96e-31,52;UBERON:0007135,1.96e-31,52;UBERON:0002020,1.54e-29,34;UBERON:0000955,1.81e-26,47;UBERON:0006238,1.81e-26,47;UBERON:0002616,1.23e-25,46;UBERON:0010371,1.28e-25,73;UBERON:0003528,1.17e-24,29;UBERON:0002791,1.17e-24,29;UBERON:0001893,1.17e-24,29;UBERON:0003056,2.54e-23,49;UBERON:0003080,1.01e-22,40;UBERON:0002780,8.45e-22,39;UBERON:0001890,8.45e-22,39;UBERON:0006240,8.45e-22,39;UBERON:0000956,2.34e-18,21;UBERON:0001869,2.34e-18,21;UBERON:0000203,2.34e-18,21;UBERON:0010314,2.26e-16,92;UBERON:0002619,1.84e-15,17;UBERON:0002021,1.41e-11,10;UBERON:0000411,1.41e-11,10;UBERON:0001950,1.41e-11,10;UBERON:0003076,5.16e-09,12;UBERON:0003057,5.16e-09,12;UBERON:0002420,2.15e-07,8;UBERON:0007245,2.15e-07,8;UBERON:0010009,2.15e-07,8;UBERON:0010011,2.15e-07,8;UBERON:0000454,2.15e-07,8;UBERON:0002240,8.38e-07,6;UBERON:0005174,8.38e-07,6;UBERON:0001137,8.38e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,1.96222640742402,1.09843091367236,1.1665793944457,1.1198913730029,0,0,0,0,0,0.573066879877513,0,10.7227724255587,15.340738398889,15.2119536841483,0,0,0,0.988866362566974,0,2.39680088414724,0.768436610643109,5.08079100311541,6.34527910158946,4.20649922702764,22.2807767834967,20.0990372265968,6.1245399607477,4.88811902193005,9.19218786610021,27.5289702498472,17.2377906415003,15.0534402591119,14.5074916503213,16.1933129176265,15.6274011167028,16.7509799400829,13.5063026407603,16.9606055032259,23.5702868378934,23.2065839702538,18.2671456908795,1.21161909333094,1.20914496170857,0,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0,0.904335843315735,0.470354828542819,0,0,0,0,0,0,0,0,16.6885054296582,19.0596503200244,0,0,0,0,20.9706895166752,11.4375150704657,14.9528679014309,29.7239587528793,35.8001640262463,19.9476522777178,19.4689515681309,0,0,0,0.841767423545896,0.650602214813519,2.98872735763515,1.80062129805349,0.90422890701429,2.31324097114515,2.94661556655154,3.65436725782942,4.9153640440413,0,0.756424320671277,1.05570674498369,0.876782929710299,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,29.4405927989778,33.0323805737503,0,0,0.639864751605702,1.16118335930219,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0.1576351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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=24050 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z1S5 | |||
|association_with_transcript=44bp_to_ENSMUST00000023095,NM_011889,uc007wyq.1_5end | |||
|cluster_id=chr15:82105409..82105464,+ | |||
|description=CAGE_peak_2_at_Sept3_5end | |||
|id=chr15:82105409..82105464,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.76e-16!33;CL:0000047!4.76e-16!33;CL:0000031!4.76e-16!33;CL:0000404!4.76e-16!33;CL:0002319!7.65e-16!43;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0000117!9.52e-15!23;CL:0000337!9.52e-15!23;CL:0000393!4.14e-13!39;CL:0000211!4.14e-13!39;CL:0000055!7.79e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-19,23;CL:0000337,4.77e-19,23;CL:0000540,5.08e-18,33;CL:0000047,5.08e-18,33;CL:0000031,5.08e-18,33;CL:0000404,5.08e-18,33;CL:0002319,1.05e-17,43;CL:0000221,5.11e-17,44;CL:0000133,5.11e-17,44;CL:0000393,1.30e-13,39;CL:0000211,1.30e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.41e-35!75;UBERON:0001016!3.41e-35!75;UBERON:0001017!1.17e-34!73;UBERON:0005743!1.17e-34!73;UBERON:0004121!2.31e-31!102;UBERON:0000924!2.31e-31!102;UBERON:0006601!2.31e-31!102;UBERON:0002346!1.54e-29!71;UBERON:0003075!1.54e-29!71;UBERON:0007284!1.54e-29!71;UBERON:0001049!7.76e-28!52;UBERON:0005068!7.76e-28!52;UBERON:0006241!7.76e-28!52;UBERON:0007135!7.76e-28!52;UBERON:0000033!1.27e-27!63;UBERON:0000955!4.33e-26!50;UBERON:0006238!4.33e-26!50;UBERON:0002616!1.99e-25!49;UBERON:0003056!6.42e-24!49;UBERON:0002020!1.21e-22!34;UBERON:0003080!2.31e-21!40;UBERON:0002780!1.24e-20!39;UBERON:0001890!1.24e-20!39;UBERON:0006240!1.24e-20!39;UBERON:0002791!5.68e-19!29;UBERON:0003528!5.68e-19!29;UBERON:0001893!5.68e-19!29;UBERON:0000956!3.16e-14!21;UBERON:0001869!3.16e-14!21;UBERON:0000203!3.16e-14!21;UBERON:0007811!1.01e-13!86;UBERON:0000153!1.26e-12!94;UBERON:0002619!4.80e-12!17;UBERON:0002021!4.09e-09!10;UBERON:0000411!4.09e-09!10;UBERON:0001950!4.09e-09!10;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.99e-38,75;UBERON:0001017,5.27e-37,73;UBERON:0000073,2.52e-33,54;UBERON:0002346,4.74e-32,64;UBERON:0003075,4.74e-32,64;UBERON:0007284,4.74e-32,64;UBERON:0004121,9.61e-32,95;UBERON:0000924,9.61e-32,95;UBERON:0006601,9.61e-32,95;UBERON:0001049,1.96e-31,52;UBERON:0005068,1.96e-31,52;UBERON:0006241,1.96e-31,52;UBERON:0007135,1.96e-31,52;UBERON:0002020,1.54e-29,34;UBERON:0000955,1.81e-26,47;UBERON:0006238,1.81e-26,47;UBERON:0002616,1.23e-25,46;UBERON:0010371,1.28e-25,73;UBERON:0003528,1.17e-24,29;UBERON:0002791,1.17e-24,29;UBERON:0001893,1.17e-24,29;UBERON:0003056,2.54e-23,49;UBERON:0003080,1.01e-22,40;UBERON:0002780,8.45e-22,39;UBERON:0001890,8.45e-22,39;UBERON:0006240,8.45e-22,39;UBERON:0000956,2.34e-18,21;UBERON:0001869,2.34e-18,21;UBERON:0000203,2.34e-18,21;UBERON:0010314,2.26e-16,92;UBERON:0002619,1.84e-15,17;UBERON:0002021,1.41e-11,10;UBERON:0000411,1.41e-11,10;UBERON:0001950,1.41e-11,10;UBERON:0003076,5.16e-09,12;UBERON:0003057,5.16e-09,12;UBERON:0002420,2.15e-07,8;UBERON:0007245,2.15e-07,8;UBERON:0010009,2.15e-07,8;UBERON:0010011,2.15e-07,8;UBERON:0000454,2.15e-07,8;UBERON:0002240,8.38e-07,6;UBERON:0005174,8.38e-07,6;UBERON:0001137,8.38e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,1.96222640742402,1.09843091367236,1.1665793944457,1.1198913730029,0,0,0,0,0,0.573066879877513,0,10.7227724255587,15.340738398889,15.2119536841483,0,0,0,0.988866362566974,0,2.39680088414724,0.768436610643109,5.08079100311541,6.34527910158946,4.20649922702764,22.2807767834967,20.0990372265968,6.1245399607477,4.88811902193005,9.19218786610021,27.5289702498472,17.2377906415003,15.0534402591119,14.5074916503213,16.1933129176265,15.6274011167028,16.7509799400829,13.5063026407603,16.9606055032259,23.5702868378934,23.2065839702538,18.2671456908795,1.21161909333094,1.20914496170857,0,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0,0.904335843315735,0.470354828542819,0,0,0,0,0,0,0,0,16.6885054296582,19.0596503200244,0,0,0,0,20.9706895166752,11.4375150704657,14.9528679014309,29.7239587528793,35.8001640262463,19.9476522777178,19.4689515681309,0,0,0,0.841767423545896,0.650602214813519,2.98872735763515,1.80062129805349,0.90422890701429,2.31324097114515,2.94661556655154,3.65436725782942,4.9153640440413,0,0.756424320671277,1.05570674498369,0.876782929710299,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,29.4405927989778,33.0323805737503,0,0,0.639864751605702,1.16118335930219,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,16.215609588767,16.9956945558695,0,0,0.631016438832513,1.95219372148319,1.72338718186239,0.716906393857656,1.11399337041197,1.41538265394416,2.42886421004937,1.16902343164525,3.16230222357219,15.4234231882467,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.08036656418786,1.03486947026204,0.643011105094777,0.709360934569094,0.891844088010353,0.822745103010605,2.13125464380219,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,17.4299783889879,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0,0.149516546043979,0,0.972255941720238,0.258319646955462,0.675824501963113,0,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,48.0039066224507,36.8260189205741,49.8419096692275,37.8077001156113,36.309373547844,27.1941803060292,34.4261475118221,34.2244114450408,22.203978040226,33.1366599521165,1.03787347584177,3.19219898720825,3.07320490357441,3.8897074730927,1.88651846365184,2.75765262675021,2.66696073361938,4.32673620201678,3.85103051510178,3.28506375292937,4.81610669791456,3.58390048633545,2.34103768674706,3.71345883948242,3.50356360629241,2.85776214769844,2.89710814862139,2.50781986602817,2.47251540481984,2.79677948255355,3.08582327146874,2.30718548007139,2.38436189947321,2.18019624948493,3.57615645578256,2.36920902096694,4.75612729469209,2.10455769150274,2.71608227691724,2.24456908663095,3.79632057997357,2.9551344712669,1.63692417267876,2.78886314134739,2.3148793317737,6.74488560432454,2.57324769289949,2.14871054048298,1.3390183244819,0,0.695603506861264 | |||
|short_description=p2@Sept3 | |||
}} |
Latest revision as of 04:50, 27 September 2015
Short description: | p2@Sept3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sept3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 44bp_to_ENSMUST00000023095, NM_011889, uc007wyq.1_5end |
EntrezGene: | Sept3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.77e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.77e-19 | 23 |
neuron | 5.08e-18 | 33 |
neuronal stem cell | 5.08e-18 | 33 |
neuroblast | 5.08e-18 | 33 |
electrically signaling cell | 5.08e-18 | 33 |
neural cell | 1.05e-17 | 43 |
ectodermal cell | 5.11e-17 | 44 |
neurectodermal cell | 5.11e-17 | 44 |
electrically responsive cell | 1.30e-13 | 39 |
electrically active cell | 1.30e-13 | 39 |