FFCP PHASE1:Mm9::chr18:35721834..35721851,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17184 | |EntrezGene=17184 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZQ61,Q8K310,Q5BL18 | |UniProt=Q6ZQ61,Q8K310,Q5BL18 | ||
|association_with_transcript=22bp_to_ENSMUST00000041514,ENSMUST00000166793,NM_010771,uc008emg.2_5end | |association_with_transcript=22bp_to_ENSMUST00000041514,ENSMUST00000166793,NM_010771,uc008emg.2_5end | ||
|cluster_id=chr18:35721834..35721851,+ | |||
|description=CAGE_peak_2_at_Matr3_5end | |description=CAGE_peak_2_at_Matr3_5end | ||
|id=chr18:35721834..35721851,+ | |id=chr18:35721834..35721851,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.52e-10!75;UBERON:0001016!1.52e-10!75;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0001017!3.38e-10!73;UBERON:0005743!3.38e-10!73;UBERON:0004121!3.23e-09!102;UBERON:0000924!3.23e-09!102;UBERON:0006601!3.23e-09!102;UBERON:0000033!3.27e-09!63;UBERON:0000955!1.46e-08!50;UBERON:0006238!1.46e-08!50;UBERON:0001049!1.54e-08!52;UBERON:0005068!1.54e-08!52;UBERON:0006241!1.54e-08!52;UBERON:0007135!1.54e-08!52;UBERON:0003056!3.00e-08!49;UBERON:0002616!3.87e-08!49;UBERON:0002021!7.73e-08!10;UBERON:0000411!7.73e-08!10;UBERON:0001950!7.73e-08!10;UBERON:0002020!7.78e-08!34;UBERON:0000153!2.87e-07!94;UBERON:0007811!7.79e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.52e-10!75;UBERON:0001016!1.52e-10!75;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0001017!3.38e-10!73;UBERON:0005743!3.38e-10!73;UBERON:0004121!3.23e-09!102;UBERON:0000924!3.23e-09!102;UBERON:0006601!3.23e-09!102;UBERON:0000033!3.27e-09!63;UBERON:0000955!1.46e-08!50;UBERON:0006238!1.46e-08!50;UBERON:0001049!1.54e-08!52;UBERON:0005068!1.54e-08!52;UBERON:0006241!1.54e-08!52;UBERON:0007135!1.54e-08!52;UBERON:0003056!3.00e-08!49;UBERON:0002616!3.87e-08!49;UBERON:0002021!7.73e-08!10;UBERON:0000411!7.73e-08!10;UBERON:0001950!7.73e-08!10;UBERON:0002020!7.78e-08!34;UBERON:0000153!2.87e-07!94;UBERON:0007811!7.79e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.16e-11,64;UBERON:0003075,2.16e-11,64;UBERON:0007284,2.16e-11,64;UBERON:0001016,1.56e-10,75;UBERON:0001017,3.46e-10,73;UBERON:0004121,9.55e-10,95;UBERON:0000924,9.55e-10,95;UBERON:0006601,9.55e-10,95;UBERON:0010314,1.18e-09,92;UBERON:0000073,2.02e-09,54;UBERON:0010371,2.84e-09,73;UBERON:0001049,1.60e-08,52;UBERON:0005068,1.60e-08,52;UBERON:0006241,1.60e-08,52;UBERON:0007135,1.60e-08,52;UBERON:0003056,3.10e-08,49;UBERON:0002021,7.69e-08,10;UBERON:0000411,7.69e-08,10;UBERON:0001950,7.69e-08,10;UBERON:0002020,8.09e-08,34;UBERON:0000955,2.90e-07,47;UBERON:0006238,2.90e-07,47;UBERON:0002616,7.30e-07,46 | |||
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| ||
|short_description=p2@Matr3 | |short_description=p2@Matr3 | ||
}} | }} |
Latest revision as of 04:44, 27 September 2015
Short description: | p2@Matr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Matr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 22bp_to_ENSMUST00000041514, ENSMUST00000166793, NM_010771, uc008emg.2_5end |
EntrezGene: | Matr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.16e-11 | 64 |
neural plate | 2.16e-11 | 64 |
presumptive neural plate | 2.16e-11 | 64 |
nervous system | 1.56e-10 | 75 |
central nervous system | 3.46e-10 | 73 |
ectoderm-derived structure | 9.55e-10 | 95 |
ectoderm | 9.55e-10 | 95 |
presumptive ectoderm | 9.55e-10 | 95 |
structure with developmental contribution from neural crest | 1.18e-09 | 92 |
regional part of nervous system | 2.02e-09 | 54 |
ecto-epithelium | 2.84e-09 | 73 |
neural tube | 1.60e-08 | 52 |
neural rod | 1.60e-08 | 52 |
future spinal cord | 1.60e-08 | 52 |
neural keel | 1.60e-08 | 52 |
pre-chordal neural plate | 3.10e-08 | 49 |
occipital lobe | 7.69e-08 | 10 |
visual cortex | 7.69e-08 | 10 |
neocortex | 7.69e-08 | 10 |
gray matter | 8.09e-08 | 34 |
brain | 2.90e-07 | 47 |
future brain | 2.90e-07 | 47 |
regional part of brain | 7.30e-07 | 46 |