FFCP PHASE1:Mm9::chr15:81575602..81575618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20286 | |EntrezGene=20286 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8VPP8,Q3UGE6 | |UniProt=F8VPP8,Q3UGE6 | ||
|association_with_transcript=324bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end | |association_with_transcript=324bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end | ||
|cluster_id=chr15:81575602..81575618,+ | |||
|description=CAGE_peak_3_at_Zc3h7b_5end | |description=CAGE_peak_3_at_Zc3h7b_5end | ||
|id=chr15:81575602..81575618,+ | |id=chr15:81575602..81575618,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.10e-14!33;CL:0000047!2.10e-14!33;CL:0000031!2.10e-14!33;CL:0000404!2.10e-14!33;CL:0000221!3.22e-14!44;CL:0000133!3.22e-14!44;CL:0002319!4.49e-14!43;CL:0000055!4.59e-13!50;CL:0000393!1.21e-12!39;CL:0000211!1.21e-12!39;CL:0000117!3.84e-09!23;CL:0000337!3.84e-09!23;CL:0002321!7.18e-08!70;CL:0000220!7.18e-08!70;CL:0000107!9.87e-07!9 | |ontology_enrichment_celltype=CL:0000540!2.10e-14!33;CL:0000047!2.10e-14!33;CL:0000031!2.10e-14!33;CL:0000404!2.10e-14!33;CL:0000221!3.22e-14!44;CL:0000133!3.22e-14!44;CL:0002319!4.49e-14!43;CL:0000055!4.59e-13!50;CL:0000393!1.21e-12!39;CL:0000211!1.21e-12!39;CL:0000117!3.84e-09!23;CL:0000337!3.84e-09!23;CL:0002321!7.18e-08!70;CL:0000220!7.18e-08!70;CL:0000107!9.87e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.88e-15,33;CL:0000047,4.88e-15,33;CL:0000031,4.88e-15,33;CL:0000404,4.88e-15,33;CL:0000221,1.29e-14,44;CL:0000133,1.29e-14,44;CL:0002319,1.80e-14,43;CL:0000393,3.42e-13,39;CL:0000211,3.42e-13,39;CL:0000117,1.18e-09,23;CL:0000337,1.18e-09,23;CL:0002321,5.91e-09,70;CL:0000723,4.38e-07,91;CL:0000048,4.38e-07,91;CL:0000034,7.32e-07,97;CL:0000107,8.12e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.89e-14!73;UBERON:0005743!1.89e-14!73;UBERON:0000073!5.43e-14!75;UBERON:0001016!5.43e-14!75;UBERON:0004121!2.08e-12!102;UBERON:0000924!2.08e-12!102;UBERON:0006601!2.08e-12!102;UBERON:0002346!3.59e-10!71;UBERON:0003075!3.59e-10!71;UBERON:0007284!3.59e-10!71;UBERON:0000025!2.24e-08!114;UBERON:0004111!1.17e-07!122;UBERON:0001049!1.92e-07!52;UBERON:0005068!1.92e-07!52;UBERON:0006241!1.92e-07!52;UBERON:0007135!1.92e-07!52;UBERON:0002410!9.87e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.89e-14!73;UBERON:0005743!1.89e-14!73;UBERON:0000073!5.43e-14!75;UBERON:0001016!5.43e-14!75;UBERON:0004121!2.08e-12!102;UBERON:0000924!2.08e-12!102;UBERON:0006601!2.08e-12!102;UBERON:0002346!3.59e-10!71;UBERON:0003075!3.59e-10!71;UBERON:0007284!3.59e-10!71;UBERON:0000025!2.24e-08!114;UBERON:0004111!1.17e-07!122;UBERON:0001049!1.92e-07!52;UBERON:0005068!1.92e-07!52;UBERON:0006241!1.92e-07!52;UBERON:0007135!1.92e-07!52;UBERON:0002410!9.87e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.48e-15,73;UBERON:0001016,3.07e-14,75;UBERON:0004121,9.71e-13,95;UBERON:0000924,9.71e-13,95;UBERON:0006601,9.71e-13,95;UBERON:0002346,8.42e-11,64;UBERON:0003075,8.42e-11,64;UBERON:0007284,8.42e-11,64;UBERON:0010314,1.07e-10,92;UBERON:0010371,1.78e-08,73;UBERON:0000025,2.21e-08,114;UBERON:0000073,9.53e-08,54;UBERON:0004111,1.33e-07,122;UBERON:0001049,1.43e-07,52;UBERON:0005068,1.43e-07,52;UBERON:0006241,1.43e-07,52;UBERON:0007135,1.43e-07,52;UBERON:0002020,6.86e-07,34;UBERON:0002410,8.12e-07,9 | |||
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| 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| ||
|short_description=p3@Zc3h7b | |short_description=p3@Zc3h7b | ||
}} | }} |
Latest revision as of 04:20, 27 September 2015
Short description: | p3@Zc3h7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zc3h7b_5end |
Coexpression cluster: | NA |
Association with transcript: | 324bp_to_ENSMUST00000109554, NM_001081016, uc007wxd.1, uc007wxe.1_5end |
EntrezGene: | Zc3h7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.88e-15 | 33 |
neuronal stem cell | 4.88e-15 | 33 |
neuroblast | 4.88e-15 | 33 |
electrically signaling cell | 4.88e-15 | 33 |
ectodermal cell | 1.29e-14 | 44 |
neurectodermal cell | 1.29e-14 | 44 |
neural cell | 1.80e-14 | 43 |
electrically responsive cell | 3.42e-13 | 39 |
electrically active cell | 3.42e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-09 | 23 |
embryonic cell | 5.91e-09 | 70 |
somatic stem cell | 4.38e-07 | 91 |
multi fate stem cell | 4.38e-07 | 91 |
stem cell | 7.32e-07 | 97 |
autonomic neuron | 8.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.48e-15 | 73 |
nervous system | 3.07e-14 | 75 |
ectoderm-derived structure | 9.71e-13 | 95 |
ectoderm | 9.71e-13 | 95 |
presumptive ectoderm | 9.71e-13 | 95 |
neurectoderm | 8.42e-11 | 64 |
neural plate | 8.42e-11 | 64 |
presumptive neural plate | 8.42e-11 | 64 |
structure with developmental contribution from neural crest | 1.07e-10 | 92 |
ecto-epithelium | 1.78e-08 | 73 |
tube | 2.21e-08 | 114 |
regional part of nervous system | 9.53e-08 | 54 |
anatomical conduit | 1.33e-07 | 122 |
neural tube | 1.43e-07 | 52 |
neural rod | 1.43e-07 | 52 |
future spinal cord | 1.43e-07 | 52 |
neural keel | 1.43e-07 | 52 |
gray matter | 6.86e-07 | 34 |
autonomic nervous system | 8.12e-07 | 9 |