FFCP PHASE1:Mm9::chr9:78039779..78039806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14860 | |EntrezGene=14860 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P24472 | |UniProt=P24472 | ||
|association_with_transcript=6bp_to_ENSMUST00000034903,NM_010357,uc009qty.2_5end | |association_with_transcript=6bp_to_ENSMUST00000034903,NM_010357,uc009qty.2_5end | ||
|cluster_id=chr9:78039779..78039806,+ | |||
|description=CAGE_peak_2_at_Gsta4_5end | |description=CAGE_peak_2_at_Gsta4_5end | ||
|id=chr9:78039779..78039806,+ | |id=chr9:78039779..78039806,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.16e-11!44;CL:0000133!1.16e-11!44;CL:0000055!2.58e-11!50;CL:0002319!2.90e-11!43;CL:0002321!2.72e-10!70;CL:0000220!2.72e-10!70;CL:0000393!1.03e-08!39;CL:0000211!1.03e-08!39;CL:0000540!3.68e-08!33;CL:0000047!3.68e-08!33;CL:0000031!3.68e-08!33;CL:0000404!3.68e-08!33;CL:0000107!3.47e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.09e-11,44;CL:0000133,1.09e-11,44;CL:0002319,2.73e-11,43;CL:0002321,2.03e-10,70;CL:0000393,9.84e-09,39;CL:0000211,9.84e-09,39;CL:0000540,3.53e-08,33;CL:0000047,3.53e-08,33;CL:0000031,3.53e-08,33;CL:0000404,3.53e-08,33;CL:0000107,3.35e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-17!75;UBERON:0001016!1.07e-17!75;UBERON:0001017!1.56e-17!73;UBERON:0005743!1.56e-17!73;UBERON:0004121!9.90e-13!102;UBERON:0000924!9.90e-13!102;UBERON:0006601!9.90e-13!102;UBERON:0004111!3.43e-10!122;UBERON:0002346!5.33e-10!71;UBERON:0003075!5.33e-10!71;UBERON:0007284!5.33e-10!71;UBERON:0000033!2.15e-09!63;UBERON:0001049!4.18e-09!52;UBERON:0005068!4.18e-09!52;UBERON:0006241!4.18e-09!52;UBERON:0007135!4.18e-09!52;UBERON:0003103!4.64e-09!43;UBERON:0000955!9.74e-09!50;UBERON:0006238!9.74e-09!50;UBERON:0000025!1.15e-08!114;UBERON:0002616!1.51e-08!49;UBERON:0002410!3.47e-07!9;UBERON:0000010!7.51e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.69e-18,75;UBERON:0001017,1.41e-17,73;UBERON:0010314,4.00e-15,92;UBERON:0004121,9.64e-13,95;UBERON:0000924,9.64e-13,95;UBERON:0006601,9.64e-13,95;UBERON:0002346,1.90e-10,64;UBERON:0003075,1.90e-10,64;UBERON:0007284,1.90e-10,64;UBERON:0004111,2.89e-10,122;UBERON:0000073,3.70e-10,54;UBERON:0001049,3.99e-09,52;UBERON:0005068,3.99e-09,52;UBERON:0006241,3.99e-09,52;UBERON:0007135,3.99e-09,52;UBERON:0003103,4.43e-09,43;UBERON:0000025,9.90e-09,114;UBERON:0010371,1.77e-07,73;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0002410,3.35e-07,9;UBERON:0002616,3.66e-07,46;UBERON:0000010,7.26e-07,11 | |||
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|phase1_expression=25.7839643838718,1.74487703819681,3.63999391511629,6.95667686005709,4.50806156951712,2.85394762250213,5.60670337429262,0.516493293766305,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0.262261207256992,1.99865857089398,3.23960427823721,4.19737126876888,0.157731082679119,0.411343300817216,0.42438965179803,22.5364718900335,0.198581902401771,0.261199789138935,22.8789164594572,12.8469197397615,4.59385571292016,6.46142994238612,6.03319451520489,8.17100703662408,2.52030129759931,10.199603490144,1.90509202037889,1.23012957516914,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,47.9666876486949,46.1265037048791,4.77221555620372,10.9534788208725,20.494364699762,36.9072786993913,35.7751014296681,22.397827460058,30.188038516644,0,0,0,3.34437266846731,4.58453503902011,20.6268836910977,4.85559506063035,6.87688273053643,3.80298842103708,12.1984031544888,13.3394219416671,2.2497492932035,4.94433181283487,4.2628806896766,11.085204089181,23.8215349299364,8.60623782160365,6.34527910158946,10.0955981448663,23.1377297367081,29.5963844875162,3.91970557487853,4.31304619582064,1.83843757322004,39.6417171597799,38.6892634398119,48.3860579757167,3.56092976871523,4.94033275453012,3.12548022334056,69.5165667513439,38.2678574821542,42.4779128819532,16.4992007865254,25.4845308630394,8.76077395378913,9.92013132664711,8.08615693142605,2.02905142091174,2.58127163094416,16.9992833426938,20.5087212822371,3.89865850468601,3.58421509677868,23.4542181620026,36.6425193542824,35.8504686351959,27.9138263863169,21.2673563862788,56.4636500622998,63.7013099266614,49.7746692207332,14.5048997477513,16.7217511213565,15.1657333504435,20.5530983494308,1.29468941823586,18.7037095221679,4.51061849591953,3.34912026143355,3.92046345335299,3.46662073271032,8.70156432804216,10.9329934456818,0.988779870937496,15.3275318335106,2.65383165584962,2.10296904931632,0.883366073841574,0.969750506270444,3.72783522436244,9.9545470983926,7.54008144528438,3.32094171771169,0.239630249011841,0.599902730993408,0.635351135365324,27.2618963716777,10.5225138648284,1.25654352112864,15.9918374576894,16.1100738118108,23.2722609906707,15.2506787283692,7.53611292492341,4.22983700074316,13.6470289554184,10.5220927943237,10.6698763229417,6.66716102857071,6.84236093260327,6.17889753126432,4.01415344992834,4.74020765053944,4.8724896771059,8.53721123438752,14.8741915123661,12.4810012910761,8.2697028357056,9.64461222681329,8.89751197521913,3.1342694986995,0.823128545631774,12.1410902759281,0.702213187313235,0.772043721344145,0.568326998791185,12.6346721246656,10.3191466391682,8.82304101158973,9.2330446878232,14.1670246858131,13.7297730469767,14.1845706297749,13.1453966685813,16.5806786161381,15.7977455916941,16.7450813360677,18.8079638146385,21.3451981640985,21.9550115291051,19.4599307202539,23.5524742391823,3.60166143327496,8.59088835757875,4.23120906661671,7.67837701926842,6.27039014023184,3.73715637834071,2.01683524623343,0.667134131534611,0.951128130562796,2.37264530772256,0.988193728344065,1.25667604400135,1.59165177632921,2.14460495831032,0,2.16138049874694,3.78368419183298,18.9667900953082,9.71112357182695,7.88954149711563,14.255592949172,10.0855293327165,6.8031745293609,9.67519018001136,10.9231509504906,7.84993639206874,11.5993334086492,5.33614728756868,3.67059232575407,4.12773889737726,1.79889689907883,3.04290182082754,4.82354319504834,4.07401362850272,2.01387296215567,0,4.3929826110093,1.43768206527355,6.69853705803306,7.17686648163489,2.52578877947112,4.30553792452589,3.37710464954357,7.944387177164,7.95863929436036,5.37784422258685,4.92260748748046,5.63256595892405,6.53274404023081,4.76087281772027,1.17080188714679,4.25614889086716,6.86540537911202,4.14582398509466,6.39066927391378,5.18054945597687,3.61622646453779,0,0.54390568381871,1.96705709207614,0.551873492609465,31.628466227595,26.6070528564301,31.4755095123217,6.5642441073137,61.5241027861701,60.518005365979,59.0260109787869,44.4481964191747,39.2125666385014,37.3661020641259,54.2446340244358,42.9616111129628,49.806260021262,11.5675673911851,8.94222536812092,8.369083372361,9.93610452056814,10.2281476242972,2.65490276679926,2.6705869977048,1.209294227859,8.11001842950362,5.02013217897314,5.53383266299069,1.29214146584111,2.54473610634254,2.85197902707777,1.8962205476149,0,1.03135543248187,7.83011093233712,11.5239100180039,12.5477923269272,9.64516657642165,9.93105308396732,12.3074484145429,7.24015690649332,6.39376393140658,0.469343416127421,0.42366414172764,2.8668691747145,2.63818004706368,0.807322133479528,0.844380948994182,0.358117032009409,0.328281799490123,1.7488850197791,35.2308073819968,1.87957968877638,5.36605856704379,3.70389054739423,1.88368457004691,2.32380187125743,2.28778173206523,3.56954702987096,3.49878630809145,1.93479963326193,53.4615546088464,9.33191181064349,7.5228202836934,11.5565714679327,16.936151977172,13.1017538247707,8.90104686139817,8.84391976261094,27.2226179663391,4.01806417204558,4.97071450469541,7.89170114157866,17.7924689792335,19.5241018739375,18.6673140810286,2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| ||
|short_description=p2@Gsta4 | |short_description=p2@Gsta4 | ||
}} | }} |
Latest revision as of 04:14, 27 September 2015
Short description: | p2@Gsta4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gsta4_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENSMUST00000034903, NM_010357, uc009qty.2_5end |
EntrezGene: | Gsta4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.09e-11 | 44 |
neurectodermal cell | 1.09e-11 | 44 |
neural cell | 2.73e-11 | 43 |
embryonic cell | 2.03e-10 | 70 |
electrically responsive cell | 9.84e-09 | 39 |
electrically active cell | 9.84e-09 | 39 |
neuron | 3.53e-08 | 33 |
neuronal stem cell | 3.53e-08 | 33 |
neuroblast | 3.53e-08 | 33 |
electrically signaling cell | 3.53e-08 | 33 |
autonomic neuron | 3.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.69e-18 | 75 |
central nervous system | 1.41e-17 | 73 |
structure with developmental contribution from neural crest | 4.00e-15 | 92 |
ectoderm-derived structure | 9.64e-13 | 95 |
ectoderm | 9.64e-13 | 95 |
presumptive ectoderm | 9.64e-13 | 95 |
neurectoderm | 1.90e-10 | 64 |
neural plate | 1.90e-10 | 64 |
presumptive neural plate | 1.90e-10 | 64 |
anatomical conduit | 2.89e-10 | 122 |
regional part of nervous system | 3.70e-10 | 54 |
neural tube | 3.99e-09 | 52 |
neural rod | 3.99e-09 | 52 |
future spinal cord | 3.99e-09 | 52 |
neural keel | 3.99e-09 | 52 |
compound organ | 4.43e-09 | 43 |
tube | 9.90e-09 | 114 |
ecto-epithelium | 1.77e-07 | 73 |
brain | 2.40e-07 | 47 |
future brain | 2.40e-07 | 47 |
autonomic nervous system | 3.35e-07 | 9 |
regional part of brain | 3.66e-07 | 46 |
peripheral nervous system | 7.26e-07 | 11 |