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FFCP PHASE1:Mm9::chr13:115892080..115892098,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109700
|EntrezGene=109700
|HGNC=
|HGNC=
|MCL_coexpression_id=2055
|TSSclassifier=NA
|UniProt=Q3URV2
|UniProt=Q3URV2
|association_with_transcript=40bp_to_ENSMUST00000036276_5end
|association_with_transcript=40bp_to_ENSMUST00000036276_5end
|cluster_id=chr13:115892080..115892098,-
|description=CAGE_peak_8_at_Itga1_5end
|description=CAGE_peak_8_at_Itga1_5end
|id=chr13:115892080..115892098,-
|id=chr13:115892080..115892098,-
|ontology_enrichment_celltype=CL:0000107!9.93e-07!9
|ontology_enrichment_celltype=CL:0000107!9.93e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,8.63e-11,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!2.50e-08!33;UBERON:0004535!3.76e-08!23;UBERON:0001009!3.76e-08!23;UBERON:0007100!4.50e-08!18;UBERON:0000948!4.50e-08!18;UBERON:0005498!4.50e-08!18;UBERON:0004140!4.50e-08!18;UBERON:0009881!4.50e-08!18;UBERON:0004141!4.50e-08!18;UBERON:0003084!4.50e-08!18;UBERON:0007005!4.50e-08!18;UBERON:0004139!4.50e-08!18;UBERON:0004291!4.50e-08!18;UBERON:0002048!1.97e-07!14;UBERON:0000117!1.97e-07!14;UBERON:0000171!1.97e-07!14;UBERON:0000170!1.97e-07!14;UBERON:0005597!1.97e-07!14;UBERON:0000118!1.97e-07!14;UBERON:0003103!2.05e-07!43;UBERON:0002410!9.93e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.73e-13,14;UBERON:0000117,4.73e-13,14;UBERON:0000171,4.73e-13,14;UBERON:0000170,4.73e-13,14;UBERON:0005597,4.73e-13,14;UBERON:0000118,4.73e-13,14;UBERON:0005157,6.19e-13,20;UBERON:0002410,8.63e-11,9;UBERON:0005153,5.28e-10,17;UBERON:0005178,5.28e-10,17;UBERON:0005181,5.28e-10,17;UBERON:0002224,5.28e-10,17;UBERON:0000915,5.28e-10,17;UBERON:0008947,5.28e-10,17;UBERON:0003258,5.28e-10,17;UBERON:0007100,3.93e-09,18;UBERON:0000948,3.93e-09,18;UBERON:0005498,3.93e-09,18;UBERON:0004140,3.93e-09,18;UBERON:0009881,3.93e-09,18;UBERON:0004141,3.93e-09,18;UBERON:0003084,3.93e-09,18;UBERON:0007005,3.93e-09,18;UBERON:0004139,3.93e-09,18;UBERON:0004291,3.93e-09,18;UBERON:0004535,8.52e-09,23;UBERON:0001009,8.52e-09,23;UBERON:0003103,1.65e-08,43;UBERON:0000010,2.40e-08,11;UBERON:0004872,1.68e-07,33;UBERON:0009569,7.10e-07,66
|phase1_expression=0.80074423552397,0.348975407639361,0.909998478779072,0.30246421130683,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.255129870453209,0.198581902401771,0,0.799962113967033,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0.782391344348039,0.218025156380447,1.09843091367236,1.74986909166855,0.279972843250725,0,0,0,0,0.514518872071894,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0.151143120213571,5.2175607966302,1.72084775396277,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,2.56652954828636,0,0,0,0,0,0.22836775943812,2.33044095282455,1.63286352971307,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,1.48316980640624,1.59059292611903,0,0.808834249737046,1.10420759230197,0.484875253135222,0,0.292780797011547,0.41889341362691,0.766371165625774,0.11981512450592,0.599902730993408,1.01656181658452,0.449371918214468,0,0.251308704225729,0.347648640384553,0,0.83115217823824,0.486723789203273,0.81471491080253,0.622034853050465,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.408218994907967,0.2562274405697,0.187403449119458,0.517406741478031,0,0.567318240503458,0,0.219195732427575,1.11218899690239,0.348252166522167,1.23469281844766,0,2.80885274925294,0.772043721344145,2.27330799516474,2.07125772535502,0.938104239924385,1.80062061461015,2.60419209143731,2.55793501271625,2.00547246753592,0.930135779001631,2.14618721119695,2.10177616260905,1.31647879930784,1.97000956894914,2.67527071501324,3.50879969820798,2.85415149878366,4.02619256281115,0.210289948564127,0.308713837137853,3.63460661282178,0,0,0.696710015581316,0.644337306610467,0.201683524623343,0.22237804384487,0.760902504450237,0,0.823494773620054,0.502670417600539,1.1937388322469,1.9496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.571242563048644,3.38123207019241,1.01825663922657,2.71533482034676,1.96380295692892,3.60448261608267,2.50937251565324,2.98297582898612,2.22114895059241,0,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,0.896987067609561,1.92977408545347,2.21703828199926,0,1.46668478797823,1.69745085775188,1.87752198630802,3.35012514883632,3.09456733151818,2.53673742215138,6.30540576424764,4.87222317227305,7.17546458958692,4.91589944147214,4.66249451037918,5.06271705035291,0,0,0,0.551873492609465,0.321101179975584,0.586058432961016,0,1.26235463602186,2.2085575359138,3.51394869866975,5.17016154558717,1.91175038362042,4.01037613348309,3.67999490025482,3.64329631507405,3.50707029493574,3.16230222357219,0.963963949265421,0.709700426041343,0.35613120733451,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,0,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0,0.356737635204141,0.329098041204242,0,2.11204537257339,2.33015277950202,0.220528398054962,0.16488625294148,0.484393280087717,0.663442174209714,1.43246812803764,0.984845398470368,1.1659233465194,0.18542530201051,0.512612642393558,0.412773735926445,2.03713980106683,0.376736914009382,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0.954670618015114,0.158167996790568,0.609958401380546,1.08005340821801,0.836353184057875,0.655087691238533,0.944050424693745,0.826534557253359,0.785267825952089,0.129614973291793,0.621339313086926,0,0.149516546043979,1.15820943319968,0.194451188344048,0.258319646955462,0.675824501963113,0.234714477291508,0.781226309063701,0.314578033277133,0.724752362478018,0.576060012515731,0.316011120628178,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.240390899039938,0.295379054349154,0.403865799792591,0.15241361331,0,0,0.192423683280659,0,1.13365191807606,0,0,0,1.73870634628971,3.56596703357246,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,1.11123363900808,1.44224540067226,0.64183841918363,1.01078884705519,1.2673964994512,0.377252682772152,0.749132059759059,0.448176066834085,0.459483751644906,0.952587382566147,1.39061191133827,1.15745532278223,3.29668720642645,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.872078499793971,1.2234219453993,0.846146078916765,1.46342378298218,0.526139422875686,1.35804113845862,0.561142271657738,0.474540072496697,0.788035859004508,0.818462086339379,0.929621047115796,0.964533054905707,0.749431733813838,0.467863216890817,0.429742108096597,0.765153328275374,0.882365676478062,1.85494268496337
|phase1_expression=0.80074423552397,0.348975407639361,0.909998478779072,0.30246421130683,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.255129870453209,0.198581902401771,0,0.799962113967033,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0.782391344348039,0.218025156380447,1.09843091367236,1.74986909166855,0.279972843250725,0,0,0,0,0.514518872071894,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0.151143120213571,5.2175607966302,1.72084775396277,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,2.56652954828636,0,0,0,0,0,0.22836775943812,2.33044095282455,1.63286352971307,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,1.48316980640624,1.59059292611903,0,0.808834249737046,1.10420759230197,0.484875253135222,0,0.292780797011547,0.41889341362691,0.766371165625774,0.11981512450592,0.599902730993408,1.01656181658452,0.449371918214468,0,0.251308704225729,0.347648640384553,0,0.83115217823824,0.486723789203273,0.81471491080253,0.622034853050465,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.408218994907967,0.2562274405697,0.187403449119458,0.517406741478031,0,0.567318240503458,0,0.219195732427575,1.11218899690239,0.348252166522167,1.23469281844766,0,2.80885274925294,0.772043721344145,2.27330799516474,2.07125772535502,0.938104239924385,1.80062061461015,2.60419209143731,2.55793501271625,2.00547246753592,0.930135779001631,2.14618721119695,2.10177616260905,1.31647879930784,1.97000956894914,2.67527071501324,3.50879969820798,2.85415149878366,4.02619256281115,0.210289948564127,0.308713837137853,3.63460661282178,0,0,0.696710015581316,0.644337306610467,0.201683524623343,0.22237804384487,0.760902504450237,0,0.823494773620054,0.502670417600539,1.1937388322469,1.9496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.571242563048644,3.38123207019241,1.01825663922657,2.71533482034676,1.96380295692892,3.60448261608267,2.50937251565324,2.98297582898612,2.22114895059241,0,0,0,0,0,0,0,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,0.896987067609561,1.92977408545347,2.21703828199926,0,1.46668478797823,1.69745085775188,1.87752198630802,3.35012514883632,3.09456733151818,2.53673742215138,6.30540576424764,4.87222317227305,7.17546458958692,4.91589944147214,4.66249451037918,5.06271705035291,0,0,0,0.551873492609465,0.321101179975584,0.586058432961016,0,1.26235463602186,2.2085575359138,3.51394869866975,5.17016154558717,1.91175038362042,4.01037613348309,3.67999490025482,3.64329631507405,3.50707029493574,3.16230222357219,0.963963949265421,0.709700426041343,0.35613120733451,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,0,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0,0.356737635204141,0.329098041204242,0,2.11204537257339,2.33015277950202,0.220528398054962,0.16488625294148,0.484393280087717,0.663442174209714,1.43246812803764,0.984845398470368,1.1659233465194,0.18542530201051,0.512612642393558,0.412773735926445,2.03713980106683,0.376736914009382,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0.954670618015114,0.158167996790568,0.609958401380546,1.08005340821801,0.836353184057875,0.655087691238533,0.944050424693745,0.826534557253359,0.785267825952089,0.129614973291793,0.621339313086926,0,0.149516546043979,1.15820943319968,0.194451188344048,0.258319646955462,0.675824501963113,0.234714477291508,0.781226309063701,0.314578033277133,0.724752362478018,0.576060012515731,0.316011120628178,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.240390899039938,0.295379054349154,0.403865799792591,0.15241361331,0,0,0.192423683280659,0,1.13365191807606,0,0,0,1.73870634628971,3.56596703357246,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,1.11123363900808,1.44224540067226,0.64183841918363,1.01078884705519,1.2673964994512,0.377252682772152,0.749132059759059,0.448176066834085,0.459483751644906,0.952587382566147,1.39061191133827,1.15745532278223,3.29668720642645,0.588795680537589,0.342869252385415,0.177475806159338,0.23843618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|short_description=p8@Itga1
|short_description=p8@Itga1
}}
}}

Latest revision as of 03:38, 27 September 2015

Short description:p8@Itga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Itga1_5end
Coexpression cluster:MCL_coexpression_mm9:2055
Association with transcript: 40bp_to_ENSMUST00000036276_5end
EntrezGene:Itga1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Itga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D53.60
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron8.63e-119

Uber anatomy
Ontology termp-valuen
lung4.73e-1314
respiratory tube4.73e-1314
respiration organ4.73e-1314
pair of lungs4.73e-1314
lung primordium4.73e-1314
lung bud4.73e-1314
epithelial fold6.19e-1320
autonomic nervous system8.63e-119
epithelial bud5.28e-1017
thoracic cavity element5.28e-1017
thoracic segment organ5.28e-1017
thoracic cavity5.28e-1017
thoracic segment of trunk5.28e-1017
respiratory primordium5.28e-1017
endoderm of foregut5.28e-1017
primary circulatory organ3.93e-0918
heart3.93e-0918
primitive heart tube3.93e-0918
primary heart field3.93e-0918
anterior lateral plate mesoderm3.93e-0918
heart tube3.93e-0918
heart primordium3.93e-0918
cardiac mesoderm3.93e-0918
cardiogenic plate3.93e-0918
heart rudiment3.93e-0918
cardiovascular system8.52e-0923
circulatory system8.52e-0923
compound organ1.65e-0843
peripheral nervous system2.40e-0811
splanchnic layer of lateral plate mesoderm1.68e-0733
subdivision of trunk7.10e-0766
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