FFCP PHASE1:Mm9::chr9:75531778..75531796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20255 | |EntrezGene=20255 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P47867 | |UniProt=P47867 | ||
|association_with_transcript=6bp_to_ENSMUST00000034699_5end | |association_with_transcript=6bp_to_ENSMUST00000034699_5end | ||
|cluster_id=chr9:75531778..75531796,- | |||
|description=CAGE_peak_2_at_Scg3_5end | |description=CAGE_peak_2_at_Scg3_5end | ||
|id=chr9:75531778..75531796,- | |id=chr9:75531778..75531796,- | ||
|ontology_enrichment_celltype=CL:0000221!9.63e-18!44;CL:0000133!9.63e-18!44;CL:0002319!1.14e-17!43;CL:0000540!1.89e-16!33;CL:0000047!1.89e-16!33;CL:0000031!1.89e-16!33;CL:0000404!1.89e-16!33;CL:0000117!4.81e-13!23;CL:0000337!4.81e-13!23;CL:0000055!3.06e-12!50;CL:0000393!3.12e-11!39;CL:0000211!3.12e-11!39 | |ontology_enrichment_celltype=CL:0000221!9.63e-18!44;CL:0000133!9.63e-18!44;CL:0002319!1.14e-17!43;CL:0000540!1.89e-16!33;CL:0000047!1.89e-16!33;CL:0000031!1.89e-16!33;CL:0000404!1.89e-16!33;CL:0000117!4.81e-13!23;CL:0000337!4.81e-13!23;CL:0000055!3.06e-12!50;CL:0000393!3.12e-11!39;CL:0000211!3.12e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.65e-20,44;CL:0000133,2.65e-20,44;CL:0002319,3.21e-20,43;CL:0000540,1.24e-18,33;CL:0000047,1.24e-18,33;CL:0000031,1.24e-18,33;CL:0000404,1.24e-18,33;CL:0000117,9.95e-15,23;CL:0000337,9.95e-15,23;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002321,6.66e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.26e-41!102;UBERON:0000924!4.26e-41!102;UBERON:0006601!4.26e-41!102;UBERON:0000073!1.61e-39!75;UBERON:0001016!1.61e-39!75;UBERON:0001017!4.00e-39!73;UBERON:0005743!4.00e-39!73;UBERON:0002346!9.90e-35!71;UBERON:0003075!9.90e-35!71;UBERON:0007284!9.90e-35!71;UBERON:0000033!1.90e-29!63;UBERON:0001049!2.82e-28!52;UBERON:0005068!2.82e-28!52;UBERON:0006241!2.82e-28!52;UBERON:0007135!2.82e-28!52;UBERON:0000955!1.69e-27!50;UBERON:0006238!1.69e-27!50;UBERON:0002616!7.32e-27!49;UBERON:0003056!3.66e-25!49;UBERON:0003080!8.59e-23!40;UBERON:0002780!3.76e-22!39;UBERON:0001890!3.76e-22!39;UBERON:0006240!3.76e-22!39;UBERON:0002020!3.10e-20!34;UBERON:0002791!9.47e-18!29;UBERON:0003528!9.47e-18!29;UBERON:0001893!9.47e-18!29;UBERON:0007811!4.83e-14!86;UBERON:0000956!3.13e-13!21;UBERON:0001869!3.13e-13!21;UBERON:0000203!3.13e-13!21;UBERON:0000153!6.96e-12!94;UBERON:0002619!2.15e-11!17;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10 | |ontology_enrichment_uberon=UBERON:0004121!4.26e-41!102;UBERON:0000924!4.26e-41!102;UBERON:0006601!4.26e-41!102;UBERON:0000073!1.61e-39!75;UBERON:0001016!1.61e-39!75;UBERON:0001017!4.00e-39!73;UBERON:0005743!4.00e-39!73;UBERON:0002346!9.90e-35!71;UBERON:0003075!9.90e-35!71;UBERON:0007284!9.90e-35!71;UBERON:0000033!1.90e-29!63;UBERON:0001049!2.82e-28!52;UBERON:0005068!2.82e-28!52;UBERON:0006241!2.82e-28!52;UBERON:0007135!2.82e-28!52;UBERON:0000955!1.69e-27!50;UBERON:0006238!1.69e-27!50;UBERON:0002616!7.32e-27!49;UBERON:0003056!3.66e-25!49;UBERON:0003080!8.59e-23!40;UBERON:0002780!3.76e-22!39;UBERON:0001890!3.76e-22!39;UBERON:0006240!3.76e-22!39;UBERON:0002020!3.10e-20!34;UBERON:0002791!9.47e-18!29;UBERON:0003528!9.47e-18!29;UBERON:0001893!9.47e-18!29;UBERON:0007811!4.83e-14!86;UBERON:0000956!3.13e-13!21;UBERON:0001869!3.13e-13!21;UBERON:0000203!3.13e-13!21;UBERON:0000153!6.96e-12!94;UBERON:0002619!2.15e-11!17;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.36e-45,75;UBERON:0001017,6.71e-45,73;UBERON:0004121,5.57e-41,95;UBERON:0000924,5.57e-41,95;UBERON:0006601,5.57e-41,95;UBERON:0002346,4.29e-37,64;UBERON:0003075,4.29e-37,64;UBERON:0007284,4.29e-37,64;UBERON:0000073,5.33e-34,54;UBERON:0001049,1.97e-32,52;UBERON:0005068,1.97e-32,52;UBERON:0006241,1.97e-32,52;UBERON:0007135,1.97e-32,52;UBERON:0010371,3.31e-31,73;UBERON:0000955,4.18e-29,47;UBERON:0006238,4.18e-29,47;UBERON:0003056,1.23e-28,49;UBERON:0002616,2.19e-28,46;UBERON:0010314,2.92e-26,92;UBERON:0003080,6.46e-26,40;UBERON:0002780,3.51e-25,39;UBERON:0001890,3.51e-25,39;UBERON:0006240,3.51e-25,39;UBERON:0002020,5.57e-23,34;UBERON:0003528,3.97e-20,29;UBERON:0002791,3.97e-20,29;UBERON:0001893,3.97e-20,29;UBERON:0000956,6.08e-15,21;UBERON:0001869,6.08e-15,21;UBERON:0000203,6.08e-15,21;UBERON:0002619,7.79e-13,17;UBERON:0002021,9.69e-10,10;UBERON:0000411,9.69e-10,10;UBERON:0001950,9.69e-10,10;UBERON:0003076,6.40e-07,12;UBERON:0003057,6.40e-07,12 | |||
|phase1_expression=4.96461426024861,0,0,0,0,2.35030980676646,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,2.19686182734472,5.24960727500565,3.07970127575798,2.87505128729943,0,0,0,0,0,0,13.7575193384526,19.0436752537932,15.2119536841483,0,0,0,0,0,4.19440154725767,12.6792040756113,8.91730665852908,6.34527910158946,9.04397333810943,8.85518051651791,7.50953039235486,13.7189695120749,8.91362880469598,11.0306254393203,16.5173821499083,17.6208526557559,20.4296689230804,12.3973110466382,15.186948838,13.022834263919,17.8677119360884,13.5063026407603,15.7382195210114,14.142172102736,11.10499110233,14.3527573285481,1.51452386666368,4.38315048619356,0,0,0,0.539703191637817,0,0,2.94933282276679,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,1.03575153458869,4.15637989381509,3.46970653532272,4.26251669636998,5.07354093963329,4.52167921657868,4.58595957829249,2.01066546127481,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,1.86391761218122,26.6430525280508,18.2218634927706,0.255457055208591,0,0,0,15.8778077769112,19.6725259212009,11.3088916901578,24.6830534673033,29.6629930503183,17.2464076984435,16.061885043708,0.101839363850316,0,0,1.68353484709179,1.56144531555244,5.74755261083682,6.66229880279792,4.37043971723574,5.57899293040888,4.09963904911519,5.34099829990454,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2392848049769,12.7601719350313,0.660837565967596,1.05780226665418,0.639864751605702,0.696710015581316,1.15980715189884,1.61346819698674,1.77902435075896,1.90225626112559,1.42358718463353,0.823494773620054,2.01068167040216,1.79060824837036,1.36474860983384,0,2.16138049874694,0.199141273254367,0.569003702859245,0.456994050438915,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,25.2064426280833,22.6218555122952,0,0.504941854408746,6.62567260774139,5.46614242015294,6.46270193198397,3.58453196928828,4.67877215573028,3.96307143104365,4.04810701674894,9.9366991689846,10.2774822266096,14.4594592389813,0,0,0,0.164970122972535,7.96470830039777,4.85561272309963,3.93020624054176,4.90373207365335,11.8120757152309,9.83792473420568,9.8202751403924,8.72480950746013,7.84294232446387,3.16036757935816,3.16255825724996,1.03135543248187,47.6615448055303,1.44048875225048,1.03486947026204,6.43011105094777,13.3005175231705,10.7021290561242,14.973960874793,16.4411072521884,0,0,0.661585194164886,0.32977250588296,0,0.120625849856312,0.238744688006273,0.328281799490123,0.291480836629851,27.4429446975554,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,0.972048067396211,0.836353184057875,1.52853794622324,1.34864346384821,1.07449492442937,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0.214368379079066,0,25.413832917768,34.0640675015311,28.6447756719698,36.9484342038928,27.4033007908257,37.769694869485,31.7260575108949,28.3702358031259,33.5325382648311,29.5123377698537,1.3492355185943,2.39414924040619,3.41467211508268,2.18796045361465,2.09613162627982,2.20612210140017,2.44471400581777,1.64828045791115,0.962757628775446,2.52697211763797,2.28131369901216,1.50901073108861,1.12369808963859,1.98477972455095,1.83793500657962,1.42888107384922,1.50649623728312,2.31491064556446,2.06042950401653,2.35518272215036,1.02860775715625,1.77475806159337,2.86123427936785,2.32554266611726,2.25862512996793,2.19997980518359,0.914639864363863,2.10455769150274,2.03706170768793,2.80571135828869,1.66089025373844,2.06859412988683,1.63692417267876,1.85924209423159,0.578719832943424,4.24677982494508,1.63752125911786,0.644613162144895,0.765153328275374,0.882365676478062,0.231867835620421 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|phase1_expression=4.96461426024861,0,0,0,0,2.35030980676646,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,2.19686182734472,5.24960727500565,3.07970127575798,2.87505128729943,0,0,0,0,0,0,13.7575193384526,19.0436752537932,15.2119536841483,0,0,0,0,0,4.19440154725767,12.6792040756113,8.91730665852908,6.34527910158946,9.04397333810943,8.85518051651791,7.50953039235486,13.7189695120749,8.91362880469598,11.0306254393203,16.5173821499083,17.6208526557559,20.4296689230804,12.3973110466382,15.186948838,13.022834263919,17.8677119360884,13.5063026407603,15.7382195210114,14.142172102736,11.10499110233,14.3527573285481,1.51452386666368,4.38315048619356,0,0,0,0.539703191637817,0,0,2.94933282276679,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,1.03575153458869,4.15637989381509,3.46970653532272,4.26251669636998,5.07354093963329,4.52167921657868,4.58595957829249,2.01066546127481,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,1.86391761218122,26.6430525280508,18.2218634927706,0.255457055208591,0,0,0,15.8778077769112,19.6725259212009,11.3088916901578,24.6830534673033,29.6629930503183,17.2464076984435,16.061885043708,0.101839363850316,0,0,1.68353484709179,1.56144531555244,5.74755261083682,6.66229880279792,4.37043971723574,5.57899293040888,4.09963904911519,5.34099829990454,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2392848049769,12.7601719350313,0.660837565967596,1.05780226665418,0.639864751605702,0.696710015581316,1.15980715189884,1.61346819698674,1.77902435075896,1.90225626112559,1.42358718463353,0.823494773620054,2.01068167040216,1.79060824837036,1.36474860983384,0,2.16138049874694,0.199141273254367,0.569003702859245,0.456994050438915,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,25.2064426280833,22.6218555122952,0,0.504941854408746,6.62567260774139,5.46614242015294,6.46270193198397,3.58453196928828,4.67877215573028,3.96307143104365,4.04810701674894,9.9366991689846,10.2774822266096,14.4594592389813,0,0,0,0.164970122972535,7.96470830039777,4.85561272309963,3.93020624054176,4.90373207365335,11.8120757152309,9.83792473420568,9.8202751403924,8.72480950746013,7.84294232446387,3.16036757935816,3.16255825724996,1.03135543248187,47.6615448055303,1.44048875225048,1.03486947026204,6.43011105094777,13.3005175231705,10.7021290561242,14.973960874793,16.4411072521884,0,0,0.661585194164886,0.32977250588296,0,0.120625849856312,0.238744688006273,0.328281799490123,0.291480836629851,27.4429446975554,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,0.972048067396211,0.836353184057875,1.52853794622324,1.34864346384821,1.07449492442937,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0.214368379079066,0,25.413832917768,34.0640675015311,28.6447756719698,36.9484342038928,27.4033007908257,37.769694869485,31.7260575108949,28.3702358031259,33.5325382648311,29.5123377698537,1.3492355185943,2.39414924040619,3.41467211508268,2.18796045361465,2.09613162627982,2.20612210140017,2.44471400581777,1.64828045791115,0.962757628775446,2.52697211763797,2.28131369901216,1.50901073108861,1.12369808963859,1.98477972455095,1.83793500657962,1.42888107384922,1.50649623728312,2.31491064556446,2.06042950401653,2.35518272215036,1.02860775715625,1.77475806159337,2.86123427936785,2.32554266611726,2.25862512996793,2.19997980518359,0.914639864363863,2.10455769150274,2.03706170768793,2.80571135828869,1.66089025373844,2.06859412988683,1.63692417267876,1.85924209423159,0.578719832943424,4.24677982494508,1.63752125911786,0.644613162144895,0.765153328275374,0.882365676478062,0.231867835620421 | ||
|short_description=p2@Scg3 | |short_description=p2@Scg3 | ||
}} | }} |
Latest revision as of 03:37, 27 September 2015
Short description: | p2@Scg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_ENSMUST00000034699_5end |
EntrezGene: | Scg3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.65e-20 | 44 |
neurectodermal cell | 2.65e-20 | 44 |
neural cell | 3.21e-20 | 43 |
neuron | 1.24e-18 | 33 |
neuronal stem cell | 1.24e-18 | 33 |
neuroblast | 1.24e-18 | 33 |
electrically signaling cell | 1.24e-18 | 33 |
CNS neuron (sensu Vertebrata) | 9.95e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.95e-15 | 23 |
electrically responsive cell | 1.46e-13 | 39 |
electrically active cell | 1.46e-13 | 39 |
embryonic cell | 6.66e-08 | 70 |