FFCP PHASE1:Mm9::chr11:120809807..120809847,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80879 | |EntrezGene=80879 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=P57787,Q3TMA0,Q3UDP9 | |UniProt=P57787,Q3TMA0,Q3UDP9 | ||
|association_with_transcript=9bp_to_NM_030696,uc007muw.1_5end | |association_with_transcript=9bp_to_NM_030696,uc007muw.1_5end | ||
|cluster_id=chr11:120809807..120809847,+ | |||
|description=CAGE_peak_2_at_Slc16a3_5end | |description=CAGE_peak_2_at_Slc16a3_5end | ||
|id=chr11:120809807..120809847,+ | |id=chr11:120809807..120809847,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.17e-12,7;CL:0000049,8.22e-09,19;CL:0000473,8.16e-08,7;CL:0002194,2.40e-07,4;CL:0000766,2.40e-07,4;CL:0000234,2.40e-07,4;CL:0000576,2.40e-07,4;CL:0000235,2.40e-07,4;CL:0000864,2.40e-07,4;CL:0002009,2.40e-07,4;CL:0000040,2.40e-07,4;CL:0000559,2.40e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.28e-07,3;DOID:4045,7.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.60e-10!22;UBERON:0004765!4.60e-10!22;UBERON:0001434!4.60e-10!22;UBERON:0002371!1.53e-09!16;UBERON:0002204!3.75e-08!32 | |ontology_enrichment_uberon=UBERON:0001474!4.60e-10!22;UBERON:0004765!4.60e-10!22;UBERON:0001434!4.60e-10!22;UBERON:0002371!1.53e-09!16;UBERON:0002204!3.75e-08!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.90e-13,22;UBERON:0004765,3.90e-13,22;UBERON:0001434,3.90e-13,22;UBERON:0002204,1.02e-12,32;UBERON:0002371,1.48e-11,16;UBERON:0002106,1.56e-09,6;UBERON:0004457,1.56e-09,6;UBERON:0000042,1.56e-09,6;UBERON:0004854,1.56e-09,6;UBERON:0009034,1.56e-09,6;UBERON:0002095,1.56e-09,6;UBERON:0004782,1.56e-09,6;UBERON:0003281,1.56e-09,6;UBERON:0009664,1.56e-09,6;UBERON:0002296,1.56e-09,6;UBERON:0005602,1.56e-09,6;UBERON:0001179,1.56e-09,6;UBERON:0006293,1.56e-09,6;UBERON:0003887,2.35e-07,10;UBERON:0002390,4.22e-07,45;UBERON:0003061,4.22e-07,45 | |||
|phase1_expression=0.160148847104794,2.09385244583617,1.81999695755814,0.60492842261366,0,0,0.467225281191051,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.342401459862411,0.174840804837995,0.999329285446988,0.607425802169478,1.39912375625629,0.788655413395594,0.959801035240171,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,0.86152399231815,1.07735616342945,1.33016393619462,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0,0,185.828044047187,100.010924099046,109.939986234498,218.822113547537,196.034054183074,155.363312969969,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,6.74924787961049,9.88866362566974,5.6838409195688,1.79760066311043,1.92109152660777,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0.376999773989026,0.494389935468748,0.433798070759735,15.0383793831479,0.485300549842228,3.5334642953663,2.90925151881133,0,0,0.209446706813455,0.255457055208591,1.7972268675888,3.59941638596045,2.03312363316904,0,0,0,0,0,0,0.162241263067758,0.203678727700633,3.4833951770826,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.61734640922383,0.199034266818493,4.91549231119264,2.57347907114715,4.83077948972507,0.207125772535502,0,0.36012412292203,0,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,1.11189021922435,1.14135375667535,0.474529061544512,1.4822905925161,0.754005626400808,0.397912944082302,0.38992817423824,0,0.648414149624083,0.796565093017469,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0.296452627087149,0.667380422864376,1.57247196090562,0.674586337154561,1.42002084971952,1.4470629585145,4.07401362850272,2.87696137450811,1.62135226775035,1.37280706594041,0,2.23284568601102,0.624075346229121,0,0,0,1.66277871149944,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0.983179888294428,2.24490476425664,0.867894351489069,4.52373851817817,9.79030230873677,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0,0,0,0,0,0,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0.63549621259146,0,0,0.484393280087717,0.180938774784468,0,0,0.582961673259701,0.18542530201051,3.07567585436135,4.74689796315412,5.55583582109135,1.88368457004691,1.23024804948923,1.14389086603261,2.03974115992626,2.79902904647316,2.62579950228405,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0,0.655087691238533,0,0.330613822901344,0.523511883968059,0,0.621339313086926,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0.15241361331,0,0.292373642219257,0,0.584384510907845,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0,0.70990322463735,0.715308569841963,0.581385666529314,0.282328141245992,0.676916863133412,0.365855945745545,0,0,0,0.593175090620871,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.499621155875892,0.233931608445408,0.214871054048298,0.956441660344217,1.32354851471709,1.15933917810211 | |phase1_expression=0.160148847104794,2.09385244583617,1.81999695755814,0.60492842261366,0,0,0.467225281191051,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.342401459862411,0.174840804837995,0.999329285446988,0.607425802169478,1.39912375625629,0.788655413395594,0.959801035240171,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,0.86152399231815,1.07735616342945,1.33016393619462,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0,0,185.828044047187,100.010924099046,109.939986234498,218.822113547537,196.034054183074,155.363312969969,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,6.74924787961049,9.88866362566974,5.6838409195688,1.79760066311043,1.92109152660777,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0.376999773989026,0.494389935468748,0.433798070759735,15.0383793831479,0.485300549842228,3.5334642953663,2.90925151881133,0,0,0.209446706813455,0.255457055208591,1.7972268675888,3.59941638596045,2.03312363316904,0,0,0,0,0,0,0.162241263067758,0.203678727700633,3.4833951770826,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.61734640922383,0.199034266818493,4.91549231119264,2.57347907114715,4.83077948972507,0.207125772535502,0,0.36012412292203,0,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,1.11189021922435,1.14135375667535,0.474529061544512,1.4822905925161,0.754005626400808,0.397912944082302,0.38992817423824,0,0.648414149624083,0.796565093017469,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0.296452627087149,0.667380422864376,1.57247196090562,0.674586337154561,1.42002084971952,1.4470629585145,4.07401362850272,2.87696137450811,1.62135226775035,1.37280706594041,0,2.23284568601102,0.624075346229121,0,0,0,1.66277871149944,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0.983179888294428,2.24490476425664,0.867894351489069,4.52373851817817,9.79030230873677,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0,0,0,0,0,0,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0.63549621259146,0,0,0.484393280087717,0.180938774784468,0,0,0.582961673259701,0.18542530201051,3.07567585436135,4.74689796315412,5.55583582109135,1.88368457004691,1.23024804948923,1.14389086603261,2.03974115992626,2.79902904647316,2.62579950228405,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0,0.655087691238533,0,0.330613822901344,0.523511883968059,0,0.621339313086926,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.302899349844443,0.15241361331,0,0.292373642219257,0,0.584384510907845,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0,0.70990322463735,0.715308569841963,0.581385666529314,0.282328141245992,0.676916863133412,0.365855945745545,0,0,0,0.593175090620871,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.499621155875892,0.233931608445408,0.214871054048298,0.956441660344217,1.32354851471709,1.15933917810211 | ||
|short_description=p2@Slc16a3 | |short_description=p2@Slc16a3 | ||
}} | }} |
Latest revision as of 03:36, 27 September 2015
Short description: | p2@Slc16a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc16a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 9bp_to_NM_030696, uc007muw.1_5end |
EntrezGene: | Slc16a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.17e-12 | 7 |
common myeloid progenitor | 8.22e-09 | 19 |
defensive cell | 8.16e-08 | 7 |
monopoietic cell | 2.40e-07 | 4 |
myeloid leukocyte | 2.40e-07 | 4 |
phagocyte | 2.40e-07 | 4 |
monocyte | 2.40e-07 | 4 |
macrophage | 2.40e-07 | 4 |
tissue-resident macrophage | 2.40e-07 | 4 |
macrophage dendritic cell progenitor | 2.40e-07 | 4 |
monoblast | 2.40e-07 | 4 |
promonocyte | 2.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.90e-13 | 22 |
skeletal element | 3.90e-13 | 22 |
skeletal system | 3.90e-13 | 22 |
musculoskeletal system | 1.02e-12 | 32 |
bone marrow | 1.48e-11 | 16 |
spleen | 1.56e-09 | 6 |
cavity lining | 1.56e-09 | 6 |
serous membrane | 1.56e-09 | 6 |
gastrointestinal system mesentery | 1.56e-09 | 6 |
stomach region | 1.56e-09 | 6 |
mesentery | 1.56e-09 | 6 |
gastrointestinal system serosa | 1.56e-09 | 6 |
mesentery of stomach | 1.56e-09 | 6 |
gut mesentery | 1.56e-09 | 6 |
dorsal mesentery | 1.56e-09 | 6 |
dorsal mesogastrium | 1.56e-09 | 6 |
peritoneal cavity | 1.56e-09 | 6 |
spleen primordium | 1.56e-09 | 6 |
intraembryonic coelom | 2.35e-07 | 10 |
hematopoietic system | 4.22e-07 | 45 |
blood island | 4.22e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.28e-07 | 3 |
muscle cancer | 7.28e-07 | 3 |