FFCP PHASE1:Mm9::chr13:115722144..115722156,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16398 | |EntrezGene=16398 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=Q62469 | |UniProt=Q62469 | ||
|association_with_transcript=92bp_to_ENSMUST00000056117,NM_008396,uc007rxw.1_5end | |association_with_transcript=92bp_to_ENSMUST00000056117,NM_008396,uc007rxw.1_5end | ||
|cluster_id=chr13:115722144..115722156,- | |||
|description=CAGE_peak_3_at_Itga2_5end | |description=CAGE_peak_3_at_Itga2_5end | ||
|id=chr13:115722144..115722156,- | |id=chr13:115722144..115722156,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0002369,4.01e-19,7;UBERON:0006858,4.01e-19,7;UBERON:0003064,5.83e-10,14;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17;UBERON:0009569,2.50e-08,66;UBERON:0005177,5.28e-07,79 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57718643539249,9.12095515710355,6.57181778519218,0,0.258937883647172,0,0.520455980298408,1.21786191324856,2.07553947530453,1.05505848386836,0.352766121407114,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0,0,0.402048282689293,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57718643539249,9.12095515710355,6.57181778519218,0,0.258937883647172,0,0.520455980298408,1.21786191324856,2.07553947530453,1.05505848386836,0.352766121407114,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0,0,0.402048282689293,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p3@Itga2 | |short_description=p3@Itga2 | ||
}} | }} |
Latest revision as of 03:34, 27 September 2015
Short description: | p3@Itga2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itga2_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 92bp_to_ENSMUST00000056117, NM_008396, uc007rxw.1_5end |
EntrezGene: | Itga2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-44 | 3 |
branched duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of lower respiratory tract | 1.18e-44 | 3 |
respiratory epithelial cell | 1.18e-44 | 3 |
tracheal epithelial cell | 1.18e-44 | 3 |
tracheoblast | 1.18e-44 | 3 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 2.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.18e-44 | 3 |
respiratory airway | 1.18e-44 | 3 |
tracheobronchial tree | 1.18e-44 | 3 |
lower respiratory tract | 1.18e-44 | 3 |
adrenal gland | 4.01e-19 | 7 |
adrenal/interrenal gland | 4.01e-19 | 7 |
intermediate mesoderm | 5.83e-10 | 14 |
thoracic cavity element | 1.48e-08 | 17 |
thoracic segment organ | 1.48e-08 | 17 |
thoracic cavity | 1.48e-08 | 17 |
thoracic segment of trunk | 1.48e-08 | 17 |
respiratory primordium | 1.48e-08 | 17 |
endoderm of foregut | 1.48e-08 | 17 |
subdivision of trunk | 2.50e-08 | 66 |
trunk region element | 5.28e-07 | 79 |